Analysis of interatomic Contacts of Structural Units in PDB entry:
9OO8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OO8 entry

There is 1 chain in PDB entry 9OO8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 13GLY 455
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 9OO8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 43Right-handed alpha
Helix 2
AA2
A
48 69Right-handed alpha
Helix 3
AA3
A
72 89Right-handed alpha
Helix 4
AA4
A
94 112Right-handed alpha
Helix 5
AA5
A
116 123Right-handed alpha
Helix 6
AA6
A
123 143Right-handed alpha
Helix 7
AA7
A
151 160Right-handed alpha
Helix 8
AA8
A
161 165Right-handed 310
Helix 9
AA9
A
172 182Right-handed alpha
Helix 10
AB1
A
186 209Right-handed alpha
Helix 11
AB2
A
230 264Right-handed alpha
Helix 12
AB3
A
283 288Right-handed alpha
Helix 13
AB4
A
291 300Right-handed alpha
Helix 14
AB5
A
300 311Right-handed alpha
Helix 15
AB6
A
315 318Right-handed 310
Helix 16
AB7
A
319 335Right-handed alpha
Helix 17
AB8
A
338 366Right-handed alpha
Helix 18
AB9
A
386 409Right-handed alpha
Helix 19
AC1
A
410 412Right-handed 310
Helix 20
AC2
A
425 436Right-handed alpha
Helix 21
AC3
A
438 455Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9OO8.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 270first strand
Strand 2
A
273 275anti-parallel
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