Analysis of interatomic Contacts of Structural Units in PDB entry:
9OOS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9OOS entry

There are 4 chains in PDB entry 9OOS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 25	LYS 841
B	SER 34	GLN 845
C	LYS 25	LYS 841
D	SER 34	GLN 845

There are120 helices in PDB entry 9OOS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	35	50	Right-handed alpha
Helix 2	AA2	A	71	86	Right-handed alpha
Helix 3	AA3	A	104	114	Right-handed alpha
Helix 4	AA4	A	125	130	Right-handed 310
Helix 5	AA5	A	143	145	Right-handed 310
Helix 6	AA6	A	146	159	Right-handed alpha
Helix 7	AA7	A	170	185	Right-handed alpha
Helix 8	AA8	A	204	211	Right-handed alpha
Helix 9	AA9	A	224	238	Right-handed alpha
Helix 10	AB1	A	251	256	Right-handed 310
Helix 11	AB2	A	257	262	Right-handed alpha
Helix 12	AB3	A	276	293	Right-handed alpha
Helix 13	AB4	A	316	328	Right-handed alpha
Helix 14	AB5	A	381	385	Right-handed 310
Helix 15	AB6	A	457	471	Right-handed alpha
Helix 16	AB7	A	499	507	Right-handed alpha
Helix 17	AB8	A	520	525	Right-handed alpha
Helix 18	AB9	A	559	583	Right-handed alpha
Helix 19	AC1	A	602	616	Right-handed alpha
Helix 20	AC2	A	626	657	Right-handed alpha
Helix 21	AC3	A	669	674	Right-handed alpha
Helix 22	AC4	A	689	694	Right-handed alpha
Helix 23	AC5	A	696	698	Right-handed 310
Helix 24	AC6	A	699	708	Right-handed alpha
Helix 25	AC7	A	713	723	Right-handed alpha
Helix 26	AC8	A	733	743	Right-handed alpha
Helix 27	AC9	A	768	782	Right-handed alpha
Helix 28	AD1	A	783	793	Right-handed alpha
Helix 29	AD2	A	809	840	Right-handed alpha
Helix 30	AD3	B	46	57	Right-handed alpha
Helix 31	AD4	B	77	93	Right-handed alpha
Helix 32	AD5	B	106	120	Right-handed alpha
Helix 33	AD6	B	127	132	Right-handed 310
Helix 34	AD7	B	149	164	Right-handed alpha
Helix 35	AD8	B	178	191	Right-handed alpha
Helix 36	AD9	B	212	222	Right-handed alpha
Helix 37	AE1	B	233	248	Right-handed alpha
Helix 38	AE2	B	259	264	Right-handed alpha
Helix 39	AE3	B	288	311	Right-handed alpha
Helix 40	AE4	B	323	330	Right-handed 310
Helix 41	AE5	B	332	340	Right-handed alpha
Helix 42	AE6	B	459	473	Right-handed alpha
Helix 43	AE7	B	496	503	Right-handed alpha
Helix 44	AE8	B	516	521	Right-handed alpha
Helix 45	AE9	B	548	552	Right-handed 310
Helix 46	AF1	B	555	576	Right-handed alpha
Helix 47	AF2	B	601	614	Right-handed alpha
Helix 48	AF3	B	625	656	Right-handed alpha
Helix 49	AF4	B	668	673	Right-handed alpha
Helix 50	AF5	B	689	699	Right-handed alpha
Helix 51	AF6	B	699	708	Right-handed alpha
Helix 52	AF7	B	713	724	Right-handed alpha
Helix 53	AF8	B	733	740	Right-handed alpha
Helix 54	AF9	B	743	746	Right-handed 310
Helix 55	AG1	B	751	755	Right-handed alpha
Helix 56	AG2	B	772	786	Right-handed alpha
Helix 57	AG3	B	787	797	Right-handed alpha
Helix 58	AG4	B	814	845	Right-handed alpha
Helix 59	AG5	C	35	52	Right-handed alpha
Helix 60	AG6	C	70	79	Right-handed alpha
Helix 61	AG7	C	79	86	Right-handed alpha
Helix 62	AG8	C	104	114	Right-handed alpha
Helix 63	AG9	C	126	130	Right-handed 310
Helix 64	AH1	C	143	145	Right-handed 310
Helix 65	AH2	C	146	159	Right-handed alpha
Helix 66	AH3	C	170	181	Right-handed alpha
Helix 67	AH4	C	182	183	Right-handed 310
Helix 68	AH5	C	184	188	Right-handed 310
Helix 69	AH6	C	204	213	Right-handed alpha
Helix 70	AH7	C	224	237	Right-handed alpha
Helix 71	AH8	C	251	256	Right-handed 310
Helix 72	AH9	C	257	262	Right-handed alpha
Helix 73	AI1	C	276	297	Right-handed alpha
Helix 74	AI2	C	316	323	Right-handed alpha
Helix 75	AI3	C	381	385	Right-handed 310
Helix 76	AI4	C	457	471	Right-handed alpha
Helix 77	AI5	C	499	507	Right-handed alpha
Helix 78	AI6	C	520	525	Right-handed alpha
Helix 79	AI7	C	561	583	Right-handed alpha
Helix 80	AI8	C	602	616	Right-handed alpha
Helix 81	AI9	C	626	657	Right-handed alpha
Helix 82	AJ1	C	669	674	Right-handed alpha
Helix 83	AJ2	C	689	694	Right-handed alpha
Helix 84	AJ3	C	699	708	Right-handed alpha
Helix 85	AJ4	C	713	723	Right-handed alpha
Helix 86	AJ5	C	733	743	Right-handed alpha
Helix 87	AJ6	C	768	782	Right-handed alpha
Helix 88	AJ7	C	783	793	Right-handed alpha
Helix 89	AJ8	C	809	821	Right-handed alpha
Helix 90	AJ9	C	821	841	Right-handed alpha
Helix 91	AK1	D	46	57	Right-handed alpha
Helix 92	AK2	D	77	93	Right-handed alpha
Helix 93	AK3	D	107	120	Right-handed alpha
Helix 94	AK4	D	127	132	Right-handed 310
Helix 95	AK5	D	149	164	Right-handed alpha
Helix 96	AK6	D	178	191	Right-handed alpha
Helix 97	AK7	D	212	221	Right-handed alpha
Helix 98	AK8	D	233	248	Right-handed alpha
Helix 99	AK9	D	259	264	Right-handed alpha
Helix 100	AL1	D	288	308	Right-handed alpha
Helix 101	AL2	D	323	329	Right-handed 310
Helix 102	AL3	D	334	340	Right-handed alpha
Helix 103	AL4	D	459	473	Right-handed alpha
Helix 104	AL5	D	496	503	Right-handed alpha
Helix 105	AL6	D	516	521	Right-handed alpha
Helix 106	AL7	D	548	552	Right-handed 310
Helix 107	AL8	D	555	576	Right-handed alpha
Helix 108	AL9	D	601	614	Right-handed alpha
Helix 109	AM1	D	626	656	Right-handed alpha
Helix 110	AM2	D	668	673	Right-handed alpha
Helix 111	AM3	D	689	699	Right-handed alpha
Helix 112	AM4	D	699	706	Right-handed alpha
Helix 113	AM5	D	707	710	Right-handed 310
Helix 114	AM6	D	713	724	Right-handed alpha
Helix 115	AM7	D	732	743	Right-handed alpha
Helix 116	AM8	D	744	746	Right-handed 310
Helix 117	AM9	D	751	755	Right-handed alpha
Helix 118	AN1	D	771	786	Right-handed alpha
Helix 119	AN2	D	787	797	Right-handed alpha
Helix 120	AN3	D	818	845	Right-handed alpha

There are 34 sheets in PDB entry 9OOS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	26	28	first strand
Strand 2	A	59	61	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	92	first strand
Strand 2	A	118	120	parallel
Strand 3	A	138	139	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	196	197	first strand
Strand 2	A	163	168	parallel
Strand 3	A	218	222	parallel
Strand 4	A	246	249	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	271	first strand
Strand 2	A	351	357	anti-parallel
Strand 3	A	360	367	anti-parallel
Strand 4	A	372	374	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	340	first strand
Strand 2	A	346	347	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	478	first strand
Strand 2	A	397	402	parallel
Strand 3	A	512	518	parallel
Strand 4	A	758	762	anti-parallel
Strand 5	A	528	529	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	410	412	first strand
Strand 2	A	454	456	anti-parallel
Strand 3	A	434	435	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	488	490	first strand
Strand 2	A	495	497	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	681	682	first strand
Strand 2	A	728	732	parallel
Strand 3	A	538	543	anti-parallel
Strand 4	A	746	753	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	73	first strand
Strand 2	B	35	42	parallel
Strand 3	B	96	99	parallel
Strand 4	B	123	125	parallel
Strand 5	B	143	145	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	168	169	first strand
Strand 2	B	198	199	parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	173	first strand
Strand 2	B	227	231	parallel
Strand 3	B	255	258	parallel
Strand 4	B	278	282	parallel
Strand 5	B	362	367	anti-parallel
Strand 6	B	373	380	anti-parallel
Strand 7	B	383	386	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	405	410	first strand
Strand 2	B	475	480	parallel
Strand 3	B	434	438	parallel
Strand 4	B	453	458	anti-parallel
Strand 5	B	418	420	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	488	490	first strand
Strand 2	B	493	495	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	524	525	first strand
Strand 2	B	765	766	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	683	684	first strand
Strand 2	B	728	732	parallel
Strand 3	B	530	539	anti-parallel
Strand 4	B	748	750	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	683	684	first strand
Strand 2	B	728	732	parallel
Strand 3	B	530	539	anti-parallel
Strand 4	B	757	762	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	28	first strand
Strand 2	C	59	61	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	90	92	first strand
Strand 2	C	118	120	parallel
Strand 3	C	138	139	parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	163	167	first strand
Strand 2	C	218	222	parallel
Strand 3	C	246	249	parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	267	271	first strand
Strand 2	C	351	356	anti-parallel
Strand 3	C	361	367	anti-parallel
Strand 4	C	372	374	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	478	first strand
Strand 2	C	397	402	parallel
Strand 3	C	512	518	parallel
Strand 4	C	758	762	anti-parallel
Strand 5	C	528	529	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	410	413	first strand
Strand 2	C	453	456	anti-parallel
Strand 3	C	434	436	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	487	488	first strand
Strand 2	C	497	498	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	681	682	first strand
Strand 2	C	728	732	parallel
Strand 3	C	538	543	anti-parallel
Strand 4	C	746	753	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	73	first strand
Strand 2	D	35	42	parallel
Strand 3	D	96	99	parallel
Strand 4	D	123	125	parallel
Strand 5	D	144	145	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	168	169	first strand
Strand 2	D	198	199	parallel

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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	171	173	first strand
Strand 2	D	227	231	parallel
Strand 3	D	255	258	parallel
Strand 4	D	278	282	parallel
Strand 5	D	362	367	anti-parallel
Strand 6	D	373	380	anti-parallel
Strand 7	D	383	386	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	343	344	first strand
Strand 2	D	347	348	anti-parallel

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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	405	410	first strand
Strand 2	D	475	480	parallel
Strand 3	D	434	438	parallel
Strand 4	D	453	458	anti-parallel
Strand 5	D	418	420	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	488	490	first strand
Strand 2	D	493	495	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	513	514	first strand
Strand 2	D	757	763	anti-parallel
Strand 3	D	530	539	anti-parallel
Strand 4	D	728	731	anti-parallel
Strand 5	D	683	684	parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	513	514	first strand
Strand 2	D	757	763	anti-parallel
Strand 3	D	530	539	anti-parallel
Strand 4	D	748	750	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	524	525	first strand
Strand 2	D	765	766	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9OOS

Analysis of interatomic Contacts of Structural Units in PDB entry:
9OOS