Analysis of interatomic Contacts of Structural Units in PDB entry:
9OQ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OQ0 entry

There are 2 chains in PDB entry 9OQ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 554ILE 831
B
 PRO 561LEU 835
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 9OQ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
563 588Right-handed alpha
Helix 2
AA2
A
593 600Right-handed alpha
Helix 3
AA3
A
601 615Right-handed alpha
Helix 4
AA4
A
616 622Right-handed alpha
Helix 5
AA5
A
626 635Right-handed alpha
Helix 6
AA6
A
635 656Right-handed alpha
Helix 7
AA7
A
657 665Right-handed alpha
Helix 8
AA8
A
665 673Right-handed alpha
Helix 9
AA9
A
678 701Right-handed alpha
Helix 10
AB1
A
723 749Right-handed alpha
Helix 11
AB2
A
753 783Right-handed alpha
Helix 12
AB3
A
787 816Right-handed alpha
Helix 13
AB4
A
823 831Right-handed 310
Helix 14
AB5
B
571 598Right-handed alpha
Helix 15
AB6
B
601 607Right-handed alpha
Helix 16
AB7
B
609 624Right-handed alpha
Helix 17
AB8
B
625 629Right-handed 310
Helix 18
AB9
B
634 668Right-handed alpha
Helix 19
AC1
B
670 682Right-handed alpha
Helix 20
AC2
B
683 708Right-handed alpha
Helix 21
AC3
B
731 754Right-handed alpha
Helix 22
AC4
B
764 790Right-handed alpha
Helix 23
AC5
B
791 793Right-handed 310
Helix 24
AC6
B
794 815Right-handed alpha
Helix 25
AC7
B
815 825Right-handed alpha
Helix 26
AC8
B
826 829Right-handed 310
Helix 27
AC9
B
830 835Right-handed alpha
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There are 2 sheets in PDB entry 9OQ0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
555 557first strand
Strand 2
A
715 719parallel
Strand 3
A
705 708anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
563 565first strand
Strand 2
B
722 728parallel
Strand 3
B
711 715anti-parallel
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