Analysis of interatomic Contacts of Structural Units in PDB entry:
9OS7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9OS7 entry

There are 3 chains in PDB entry 9OS7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 6	LYS 560
B	LYS 6	LYS 560
C	GLY 582	LYS 853

There are 56 helices in PDB entry 9OS7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	32	35	Right-handed 310
Helix 2	AA2	A	43	54	Right-handed alpha
Helix 3	AA3	A	66	74	Right-handed alpha
Helix 4	AA4	A	111	121	Right-handed alpha
Helix 5	AA5	A	148	152	Right-handed 310
Helix 6	AA6	A	185	190	Right-handed alpha
Helix 7	AA7	A	215	223	Right-handed alpha
Helix 8	AA8	A	231	239	Right-handed alpha
Helix 9	AA9	A	242	247	Right-handed alpha
Helix 10	AB1	A	261	272	Right-handed alpha
Helix 11	AB2	A	288	296	Right-handed alpha
Helix 12	AB3	A	314	323	Right-handed alpha
Helix 13	AB4	A	343	348	Right-handed alpha
Helix 14	AB5	A	348	354	Right-handed alpha
Helix 15	AB6	A	371	376	Right-handed alpha
Helix 16	AB7	A	400	407	Right-handed alpha
Helix 17	AB8	A	421	426	Right-handed alpha
Helix 18	AB9	A	438	453	Right-handed alpha
Helix 19	AC1	A	457	472	Right-handed alpha
Helix 20	AC2	A	473	477	Right-handed 310
Helix 21	AC3	A	505	517	Right-handed alpha
Helix 22	AC4	A	543	558	Right-handed alpha
Helix 23	AC5	B	32	35	Right-handed 310
Helix 24	AC6	B	43	54	Right-handed alpha
Helix 25	AC7	B	66	74	Right-handed alpha
Helix 26	AC8	B	111	121	Right-handed alpha
Helix 27	AC9	B	148	152	Right-handed 310
Helix 28	AD1	B	185	190	Right-handed alpha
Helix 29	AD2	B	215	223	Right-handed alpha
Helix 30	AD3	B	231	239	Right-handed alpha
Helix 31	AD4	B	242	247	Right-handed alpha
Helix 32	AD5	B	261	272	Right-handed alpha
Helix 33	AD6	B	288	296	Right-handed alpha
Helix 34	AD7	B	314	323	Right-handed alpha
Helix 35	AD8	B	343	348	Right-handed alpha
Helix 36	AD9	B	348	354	Right-handed alpha
Helix 37	AE1	B	371	376	Right-handed alpha
Helix 38	AE2	B	400	407	Right-handed alpha
Helix 39	AE3	B	421	426	Right-handed alpha
Helix 40	AE4	B	438	453	Right-handed alpha
Helix 41	AE5	B	457	472	Right-handed alpha
Helix 42	AE6	B	473	477	Right-handed 310
Helix 43	AE7	B	505	517	Right-handed alpha
Helix 44	AE8	B	543	558	Right-handed alpha
Helix 45	AE9	C	585	604	Right-handed alpha
Helix 46	AF1	C	641	645	Right-handed 310
Helix 47	AF2	C	649	658	Right-handed alpha
Helix 48	AF3	C	658	669	Right-handed alpha
Helix 49	AF4	C	679	691	Right-handed alpha
Helix 50	AF5	C	694	711	Right-handed alpha
Helix 51	AF6	C	723	744	Right-handed alpha
Helix 52	AF7	C	746	769	Right-handed alpha
Helix 53	AF8	C	769	776	Right-handed alpha
Helix 54	AF9	C	778	801	Right-handed alpha
Helix 55	AG1	C	805	815	Right-handed alpha
Helix 56	AG2	C	823	829	Right-handed alpha

There are 13 sheets in PDB entry 9OS7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	84	first strand
Strand 2	A	57	62	parallel
Strand 3	A	12	16	parallel
Strand 4	A	101	104	parallel
Strand 5	A	140	145	anti-parallel
Strand 6	A	129	133	anti-parallel
Strand 7	A	171	173	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	38	first strand
Strand 2	A	41	42	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	109	first strand
Strand 2	A	181	182	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	203	205	first strand
Strand 2	A	519	523	parallel
Strand 3	A	533	536	anti-parallel
Strand 4	A	495	496	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	253	257	first strand
Strand 2	A	395	399	anti-parallel
Strand 3	A	379	383	anti-parallel
Strand 4	A	358	360	parallel
Strand 5	A	327	331	parallel
Strand 6	A	279	281	parallel
Strand 7	A	303	304	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	482	483	first strand
Strand 2	A	498	499	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	84	first strand
Strand 2	B	57	62	parallel
Strand 3	B	12	16	parallel
Strand 4	B	101	104	parallel
Strand 5	B	140	145	anti-parallel
Strand 6	B	129	133	anti-parallel
Strand 7	B	171	173	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	37	38	first strand
Strand 2	B	41	42	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	109	first strand
Strand 2	B	181	182	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	205	first strand
Strand 2	B	519	523	parallel
Strand 3	B	533	536	anti-parallel
Strand 4	B	495	496	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	253	257	first strand
Strand 2	B	395	399	anti-parallel
Strand 3	B	379	383	anti-parallel
Strand 4	B	358	360	parallel
Strand 5	B	327	331	parallel
Strand 6	B	279	281	parallel
Strand 7	B	303	304	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	482	483	first strand
Strand 2	B	498	499	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	633	634	first strand
Strand 2	C	676	677	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9OS7

Analysis of interatomic Contacts of Structural Units in PDB entry:
9OS7