Analysis of interatomic Contacts of Structural Units in PDB entry:
9OT6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9OT6 entry

There are 8 chains in PDB entry 9OT6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 27	LEU 2083
B	SER 27	LEU 2083
C	MET 1	SER 123
D	THR 131	LEU 843
E	GLY 7	PRO 287
F	THR 131	LEU 843
G	GLY 7	PRO 287
H	MET 1	SER 123

There are272 helices in PDB entry 9OT6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	44	Right-handed alpha
Helix 2	AA2	A	49	60	Right-handed alpha
Helix 3	AA3	A	71	88	Right-handed alpha
Helix 4	AA4	A	92	106	Right-handed alpha
Helix 5	AA5	A	127	146	Right-handed alpha
Helix 6	AA6	A	149	169	Right-handed alpha
Helix 7	AA7	A	176	193	Right-handed alpha
Helix 8	AA8	A	203	209	Right-handed alpha
Helix 9	AA9	A	297	301	Right-handed alpha
Helix 10	AB1	A	325	340	Right-handed alpha
Helix 11	AB2	A	341	359	Right-handed alpha
Helix 12	AB3	A	369	385	Right-handed alpha
Helix 13	AB4	A	392	412	Right-handed alpha
Helix 14	AB5	A	433	446	Right-handed alpha
Helix 15	AB6	A	451	467	Right-handed alpha
Helix 16	AB7	A	479	496	Right-handed alpha
Helix 17	AB8	A	499	513	Right-handed alpha
Helix 18	AB9	A	516	523	Right-handed alpha
Helix 19	AC1	A	563	584	Right-handed alpha
Helix 20	AC2	A	586	601	Right-handed alpha
Helix 21	AC3	A	612	627	Right-handed alpha
Helix 22	AC4	A	633	644	Right-handed alpha
Helix 23	AC5	A	650	652	Right-handed 310
Helix 24	AC6	A	653	665	Right-handed alpha
Helix 25	AC7	A	668	686	Right-handed alpha
Helix 26	AC8	A	704	718	Right-handed alpha
Helix 27	AC9	A	722	741	Right-handed alpha
Helix 28	AD1	A	766	769	Right-handed 310
Helix 29	AD2	A	770	779	Right-handed alpha
Helix 30	AD3	A	788	806	Right-handed alpha
Helix 31	AD4	A	816	822	Right-handed alpha
Helix 32	AD5	A	822	830	Right-handed alpha
Helix 33	AD6	A	840	845	Right-handed alpha
Helix 34	AD7	A	858	873	Right-handed alpha
Helix 35	AD8	A	875	884	Right-handed alpha
Helix 36	AD9	A	886	907	Right-handed alpha
Helix 37	AE1	A	912	915	Right-handed 310
Helix 38	AE2	A	916	921	Right-handed alpha
Helix 39	AE3	A	922	928	Right-handed alpha
Helix 40	AE4	A	934	952	Right-handed alpha
Helix 41	AE5	A	957	974	Right-handed alpha
Helix 42	AE6	A	975	977	Right-handed 310
Helix 43	AE7	A	980	997	Right-handed alpha
Helix 44	AE8	A	998	1001	Right-handed 310
Helix 45	AE9	A	1005	1021	Right-handed alpha
Helix 46	AF1	A	1046	1072	Right-handed alpha
Helix 47	AF2	A	1072	1084	Right-handed alpha
Helix 48	AF3	A	1086	1093	Right-handed alpha
Helix 49	AF4	A	1097	1107	Right-handed alpha
Helix 50	AF5	A	1136	1157	Right-handed alpha
Helix 51	AF6	A	1169	1184	Right-handed alpha
Helix 52	AF7	A	1185	1202	Right-handed alpha
Helix 53	AF8	A	1207	1216	Right-handed alpha
Helix 54	AF9	A	1217	1221	Right-handed 310
Helix 55	AG1	A	1224	1241	Right-handed alpha
Helix 56	AG2	A	1244	1263	Right-handed alpha
Helix 57	AG3	A	1275	1279	Right-handed 310
Helix 58	AG4	A	1294	1309	Right-handed alpha
Helix 59	AG5	A	1315	1326	Right-handed alpha
Helix 60	AG6	A	1342	1345	Right-handed 310
Helix 61	AG7	A	1346	1362	Right-handed alpha
Helix 62	AG8	A	1369	1384	Right-handed alpha
Helix 63	AG9	A	1385	1387	Right-handed 310
Helix 64	AH1	A	1400	1416	Right-handed alpha
Helix 65	AH2	A	1478	1508	Right-handed alpha
Helix 66	AH3	A	1518	1533	Right-handed alpha
Helix 67	AH4	A	1540	1551	Right-handed alpha
Helix 68	AH5	A	1551	1558	Right-handed alpha
Helix 69	AH6	A	1559	1561	Right-handed 310
Helix 70	AH7	A	1566	1579	Right-handed alpha
Helix 71	AH8	A	1580	1583	Right-handed 310
Helix 72	AH9	A	1585	1590	Right-handed alpha
Helix 73	AI1	A	1591	1593	Right-handed 310
Helix 74	AI2	A	1616	1622	Right-handed alpha
Helix 75	AI3	A	1623	1625	Right-handed 310
Helix 76	AI4	A	1631	1643	Right-handed alpha
Helix 77	AI5	A	1646	1653	Right-handed alpha
Helix 78	AI6	A	1653	1660	Right-handed alpha
Helix 79	AI7	A	1667	1680	Right-handed alpha
Helix 80	AI8	A	1681	1695	Right-handed alpha
Helix 81	AI9	A	1708	1720	Right-handed alpha
Helix 82	AJ1	A	1725	1749	Right-handed alpha
Helix 83	AJ2	A	1754	1768	Right-handed alpha
Helix 84	AJ3	A	1814	1821	Right-handed alpha
Helix 85	AJ4	A	1856	1876	Right-handed alpha
Helix 86	AJ5	A	1904	1913	Right-handed alpha
Helix 87	AJ6	A	1915	1925	Right-handed alpha
Helix 88	AJ7	A	1929	1954	Right-handed alpha
Helix 89	AJ8	A	1997	2004	Right-handed alpha
Helix 90	AJ9	A	2010	2028	Right-handed alpha
Helix 91	AK1	A	2030	2040	Right-handed alpha
Helix 92	AK2	A	2041	2045	Right-handed 310
Helix 93	AK3	A	2052	2060	Right-handed alpha
Helix 94	AK4	A	2066	2081	Right-handed alpha
Helix 95	AK5	B	30	44	Right-handed alpha
Helix 96	AK6	B	49	60	Right-handed alpha
Helix 97	AK7	B	71	88	Right-handed alpha
Helix 98	AK8	B	92	106	Right-handed alpha
Helix 99	AK9	B	127	146	Right-handed alpha
Helix 100	AL1	B	149	169	Right-handed alpha
Helix 101	AL2	B	176	193	Right-handed alpha
Helix 102	AL3	B	203	209	Right-handed alpha
Helix 103	AL4	B	297	301	Right-handed alpha
Helix 104	AL5	B	325	340	Right-handed alpha
Helix 105	AL6	B	341	359	Right-handed alpha
Helix 106	AL7	B	369	385	Right-handed alpha
Helix 107	AL8	B	392	412	Right-handed alpha
Helix 108	AL9	B	433	446	Right-handed alpha
Helix 109	AM1	B	451	467	Right-handed alpha
Helix 110	AM2	B	479	496	Right-handed alpha
Helix 111	AM3	B	499	513	Right-handed alpha
Helix 112	AM4	B	516	523	Right-handed alpha
Helix 113	AM5	B	563	584	Right-handed alpha
Helix 114	AM6	B	586	601	Right-handed alpha
Helix 115	AM7	B	612	627	Right-handed alpha
Helix 116	AM8	B	633	644	Right-handed alpha
Helix 117	AM9	B	650	652	Right-handed 310
Helix 118	AN1	B	653	665	Right-handed alpha
Helix 119	AN2	B	668	686	Right-handed alpha
Helix 120	AN3	B	704	718	Right-handed alpha
Helix 121	AN4	B	722	741	Right-handed alpha
Helix 122	AN5	B	766	769	Right-handed 310
Helix 123	AN6	B	770	779	Right-handed alpha
Helix 124	AN7	B	788	806	Right-handed alpha
Helix 125	AN8	B	816	822	Right-handed alpha
Helix 126	AN9	B	822	830	Right-handed alpha
Helix 127	AO1	B	840	845	Right-handed alpha
Helix 128	AO2	B	858	873	Right-handed alpha
Helix 129	AO3	B	875	884	Right-handed alpha
Helix 130	AO4	B	886	907	Right-handed alpha
Helix 131	AO5	B	912	915	Right-handed 310
Helix 132	AO6	B	916	921	Right-handed alpha
Helix 133	AO7	B	922	928	Right-handed alpha
Helix 134	AO8	B	934	952	Right-handed alpha
Helix 135	AO9	B	957	974	Right-handed alpha
Helix 136	AP1	B	975	977	Right-handed 310
Helix 137	AP2	B	980	997	Right-handed alpha
Helix 138	AP3	B	998	1001	Right-handed 310
Helix 139	AP4	B	1005	1021	Right-handed alpha
Helix 140	AP5	B	1046	1072	Right-handed alpha
Helix 141	AP6	B	1072	1084	Right-handed alpha
Helix 142	AP7	B	1086	1093	Right-handed alpha
Helix 143	AP8	B	1097	1107	Right-handed alpha
Helix 144	AP9	B	1136	1157	Right-handed alpha
Helix 145	AQ1	B	1169	1184	Right-handed alpha
Helix 146	AQ2	B	1185	1202	Right-handed alpha
Helix 147	AQ3	B	1207	1216	Right-handed alpha
Helix 148	AQ4	B	1217	1221	Right-handed 310
Helix 149	AQ5	B	1224	1241	Right-handed alpha
Helix 150	AQ6	B	1244	1263	Right-handed alpha
Helix 151	AQ7	B	1275	1279	Right-handed 310
Helix 152	AQ8	B	1294	1309	Right-handed alpha
Helix 153	AQ9	B	1315	1326	Right-handed alpha
Helix 154	AR1	B	1342	1345	Right-handed 310
Helix 155	AR2	B	1346	1362	Right-handed alpha
Helix 156	AR3	B	1369	1384	Right-handed alpha
Helix 157	AR4	B	1385	1387	Right-handed 310
Helix 158	AR5	B	1400	1416	Right-handed alpha
Helix 159	AR6	B	1478	1508	Right-handed alpha
Helix 160	AR7	B	1518	1533	Right-handed alpha
Helix 161	AR8	B	1540	1551	Right-handed alpha
Helix 162	AR9	B	1551	1558	Right-handed alpha
Helix 163	AS1	B	1559	1561	Right-handed 310
Helix 164	AS2	B	1566	1579	Right-handed alpha
Helix 165	AS3	B	1580	1583	Right-handed 310
Helix 166	AS4	B	1585	1590	Right-handed alpha
Helix 167	AS5	B	1591	1593	Right-handed 310
Helix 168	AS6	B	1616	1622	Right-handed alpha
Helix 169	AS7	B	1623	1625	Right-handed 310
Helix 170	AS8	B	1631	1643	Right-handed alpha
Helix 171	AS9	B	1646	1653	Right-handed alpha
Helix 172	AT1	B	1653	1660	Right-handed alpha
Helix 173	AT2	B	1667	1680	Right-handed alpha
Helix 174	AT3	B	1681	1695	Right-handed alpha
Helix 175	AT4	B	1708	1720	Right-handed alpha
Helix 176	AT5	B	1725	1749	Right-handed alpha
Helix 177	AT6	B	1754	1768	Right-handed alpha
Helix 178	AT7	B	1814	1821	Right-handed alpha
Helix 179	AT8	B	1856	1876	Right-handed alpha
Helix 180	AT9	B	1904	1913	Right-handed alpha
Helix 181	AU1	B	1915	1925	Right-handed alpha
Helix 182	AU2	B	1929	1954	Right-handed alpha
Helix 183	AU3	B	1997	2004	Right-handed alpha
Helix 184	AU4	B	2010	2028	Right-handed alpha
Helix 185	AU5	B	2030	2040	Right-handed alpha
Helix 186	AU6	B	2041	2045	Right-handed 310
Helix 187	AU7	B	2052	2060	Right-handed alpha
Helix 188	AU8	B	2066	2081	Right-handed alpha
Helix 189	AU9	D	134	154	Right-handed alpha
Helix 190	AV1	D	168	196	Right-handed alpha
Helix 191	AV2	D	217	233	Right-handed alpha
Helix 192	AV3	D	234	247	Right-handed alpha
Helix 193	AV4	D	251	253	Right-handed 310
Helix 194	AV5	D	254	269	Right-handed alpha
Helix 195	AV6	D	323	341	Right-handed alpha
Helix 196	AV7	D	352	375	Right-handed alpha
Helix 197	AV8	D	379	390	Right-handed alpha
Helix 198	AV9	D	396	411	Right-handed alpha
Helix 199	AW1	D	413	427	Right-handed alpha
Helix 200	AW2	D	431	443	Right-handed alpha
Helix 201	AW3	D	448	461	Right-handed alpha
Helix 202	AW4	D	466	486	Right-handed alpha
Helix 203	AW5	D	490	511	Right-handed alpha
Helix 204	AW6	D	514	528	Right-handed alpha
Helix 205	AW7	D	530	545	Right-handed alpha
Helix 206	AW8	D	548	562	Right-handed alpha
Helix 207	AW9	D	564	579	Right-handed alpha
Helix 208	AX1	D	583	597	Right-handed alpha
Helix 209	AX2	D	598	617	Right-handed alpha
Helix 210	AX3	D	689	708	Right-handed alpha
Helix 211	AX4	D	711	723	Right-handed alpha
Helix 212	AX5	D	729	744	Right-handed alpha
Helix 213	AX6	D	747	760	Right-handed alpha
Helix 214	AX7	D	764	778	Right-handed alpha
Helix 215	AX8	D	781	794	Right-handed alpha
Helix 216	AX9	D	797	810	Right-handed alpha
Helix 217	AY1	D	813	829	Right-handed alpha
Helix 218	AY2	D	835	839	Right-handed 310
Helix 219	AY3	E	8	17	Right-handed alpha
Helix 220	AY4	E	36	46	Right-handed alpha
Helix 221	AY5	E	52	63	Right-handed alpha
Helix 222	AY6	E	68	77	Right-handed alpha
Helix 223	AY7	E	78	91	Right-handed alpha
Helix 224	AY8	E	100	114	Right-handed alpha
Helix 225	AY9	E	176	189	Right-handed alpha
Helix 226	AZ1	E	196	211	Right-handed alpha
Helix 227	AZ2	E	215	221	Right-handed alpha
Helix 228	AZ3	E	233	248	Right-handed alpha
Helix 229	AZ4	E	253	271	Right-handed alpha
Helix 230	AZ5	E	272	284	Right-handed alpha
Helix 231	AZ6	F	134	154	Right-handed alpha
Helix 232	AZ7	F	168	196	Right-handed alpha
Helix 233	AZ8	F	217	233	Right-handed alpha
Helix 234	AZ9	F	234	247	Right-handed alpha
Helix 235	BA1	F	251	253	Right-handed 310
Helix 236	BA2	F	254	269	Right-handed alpha
Helix 237	BA3	F	323	341	Right-handed alpha
Helix 238	BA4	F	352	375	Right-handed alpha
Helix 239	BA5	F	379	390	Right-handed alpha
Helix 240	BA6	F	396	411	Right-handed alpha
Helix 241	BA7	F	413	427	Right-handed alpha
Helix 242	BA8	F	431	443	Right-handed alpha
Helix 243	BA9	F	448	461	Right-handed alpha
Helix 244	BB1	F	466	486	Right-handed alpha
Helix 245	BB2	F	490	511	Right-handed alpha
Helix 246	BB3	F	514	528	Right-handed alpha
Helix 247	BB4	F	530	545	Right-handed alpha
Helix 248	BB5	F	548	562	Right-handed alpha
Helix 249	BB6	F	564	579	Right-handed alpha
Helix 250	BB7	F	583	597	Right-handed alpha
Helix 251	BB8	F	598	617	Right-handed alpha
Helix 252	BB9	F	689	708	Right-handed alpha
Helix 253	BC1	F	711	723	Right-handed alpha
Helix 254	BC2	F	729	744	Right-handed alpha
Helix 255	BC3	F	747	760	Right-handed alpha
Helix 256	BC4	F	764	778	Right-handed alpha
Helix 257	BC5	F	781	794	Right-handed alpha
Helix 258	BC6	F	797	810	Right-handed alpha
Helix 259	BC7	F	813	829	Right-handed alpha
Helix 260	BC8	F	835	839	Right-handed 310
Helix 261	BC9	G	8	17	Right-handed alpha
Helix 262	BD1	G	36	46	Right-handed alpha
Helix 263	BD2	G	52	63	Right-handed alpha
Helix 264	BD3	G	68	77	Right-handed alpha
Helix 265	BD4	G	78	91	Right-handed alpha
Helix 266	BD5	G	100	114	Right-handed alpha
Helix 267	BD6	G	176	189	Right-handed alpha
Helix 268	BD7	G	196	211	Right-handed alpha
Helix 269	BD8	G	215	221	Right-handed alpha
Helix 270	BD9	G	233	248	Right-handed alpha
Helix 271	BE1	G	253	271	Right-handed alpha
Helix 272	BE2	G	272	284	Right-handed alpha

There are 16 sheets in PDB entry 9OT6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	70	first strand
Strand 2	A	110	112	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1032	1033	first strand
Strand 2	A	1040	1041	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1782	1787	first strand
Strand 2	A	1803	1811	anti-parallel
Strand 3	A	1842	1851	anti-parallel
Strand 4	A	1893	1897	anti-parallel
Strand 5	A	1886	1890	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1964	1965	first strand
Strand 2	A	1971	1972	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	70	first strand
Strand 2	B	110	112	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1032	1033	first strand
Strand 2	B	1040	1041	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1782	1787	first strand
Strand 2	B	1803	1811	anti-parallel
Strand 3	B	1842	1851	anti-parallel
Strand 4	B	1893	1897	anti-parallel
Strand 5	B	1886	1890	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1964	1965	first strand
Strand 2	B	1971	1972	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	6	9	first strand
Strand 2	C	22	26	anti-parallel
Strand 3	C	79	83	anti-parallel
Strand 4	C	70	74	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	61	first strand
Strand 2	C	48	53	anti-parallel
Strand 3	C	35	41	anti-parallel
Strand 4	C	93	101	anti-parallel
Strand 5	C	110	114	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	61	first strand
Strand 2	C	48	53	anti-parallel
Strand 3	C	35	41	anti-parallel
Strand 4	C	93	101	anti-parallel
Strand 5	C	118	120	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	123	125	first strand
Strand 2	E	160	163	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	123	125	first strand
Strand 2	G	160	163	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	6	9	first strand
Strand 2	H	22	26	anti-parallel
Strand 3	H	79	83	anti-parallel
Strand 4	H	70	74	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	59	61	first strand
Strand 2	H	48	53	anti-parallel
Strand 3	H	35	41	anti-parallel
Strand 4	H	93	101	anti-parallel
Strand 5	H	110	114	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	59	61	first strand
Strand 2	H	48	53	anti-parallel
Strand 3	H	35	41	anti-parallel
Strand 4	H	93	101	anti-parallel
Strand 5	H	118	120	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9OT6

Analysis of interatomic Contacts of Structural Units in PDB entry:
9OT6