Analysis of interatomic Contacts of Structural Units in PDB entry:
9OU1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OU1 entry

There are 4 chains in PDB entry 9OU1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 13LEU 284
A
 GLY 286ASP 319
B
 GLY 13LEU 284
B
 GLY 286ASP 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9OU1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 35Right-handed 310
Helix 2
AA2
A
36 47Right-handed alpha
Helix 3
AA3
A
56 60Right-handed 310
Helix 4
AA4
A
61 74Right-handed alpha
Helix 5
AA5
A
78 82Right-handed 310
Helix 6
AA6
A
89 93Right-handed 310
Helix 7
AA7
A
94 96Right-handed 310
Helix 8
AA8
A
97 110Right-handed alpha
Helix 9
AA9
A
142 156Right-handed alpha
Helix 10
AB1
A
168 179Right-handed alpha
Helix 11
AB2
A
196 206Right-handed alpha
Helix 12
AB3
A
226 237Right-handed alpha
Helix 13
AB4
A
239 252Right-handed alpha
Helix 14
AB5
A
261 269Right-handed alpha
Helix 15
AB6
A
277 287Right-handed alpha
Helix 16
AB7
A
296 301Right-handed alpha
Helix 17
AB8
A
310 315Right-handed alpha
Helix 18
AB9
B
33 35Right-handed 310
Helix 19
AC1
B
36 49Right-handed alpha
Helix 20
AC2
B
56 60Right-handed 310
Helix 21
AC3
B
61 75Right-handed alpha
Helix 22
AC4
B
78 82Right-handed 310
Helix 23
AC5
B
89 93Right-handed 310
Helix 24
AC6
B
94 96Right-handed 310
Helix 25
AC7
B
97 110Right-handed alpha
Helix 26
AC8
B
142 156Right-handed alpha
Helix 27
AC9
B
168 179Right-handed alpha
Helix 28
AD1
B
196 207Right-handed alpha
Helix 29
AD2
B
226 237Right-handed alpha
Helix 30
AD3
B
239 252Right-handed alpha
Helix 31
AD4
B
261 269Right-handed alpha
Helix 32
AD5
B
277 286Right-handed alpha
Helix 33
AD6
B
296 301Right-handed alpha
Helix 34
AD7
B
310 315Right-handed alpha
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There are 6 sheets in PDB entry 9OU1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 16first strand
Strand 2
A
22 24anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
A
52 54parallel
Strand 3
A
83 88parallel
Strand 4
A
116 119parallel
Strand 5
A
162 165parallel
Strand 6
A
185 189parallel
Strand 7
A
209 213parallel
Strand 8
A
254 255parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 125first strand
Strand 2
A
138 139anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 16first strand
Strand 2
B
22 24anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 29first strand
Strand 2
B
52 54parallel
Strand 3
B
83 88parallel
Strand 4
B
116 119parallel
Strand 5
B
162 165parallel
Strand 6
B
185 189parallel
Strand 7
B
209 213parallel
Strand 8
B
254 255parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 125first strand
Strand 2
B
138 139anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il