Analysis of interatomic Contacts of Structural Units in PDB entry:
9OV1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OV1 entry

There are 6 chains in PDB entry 9OV1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 105ASP 313
B
PRO 105ASP 313
C
PRO 105ASP 313
D
PRO 105ASP 313
E
PRO 105ASP 313
F
PRO 105ASP 313
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 72 helices in PDB entry 9OV1. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
107 121Right-handed alpha
Helix 2
AA2
A
124 138Right-handed alpha
Helix 3
AA3
A
138 143Right-handed alpha
Helix 4
AA4
A
157 177Right-handed alpha
Helix 5
AA5
A
181 192Right-handed alpha
Helix 6
AA6
A
195 200Right-handed alpha
Helix 7
AA7
A
209 215Right-handed alpha
Helix 8
AA8
A
216 233Right-handed alpha
Helix 9
AA9
A
236 248Right-handed alpha
Helix 10
AB1
A
252 256Right-handed 310
Helix 11
AB2
A
263 289Right-handed alpha
Helix 12
AB3
A
298 302Right-handed 310
Helix 13
AB4
B
107 121Right-handed alpha
Helix 14
AB5
B
124 138Right-handed alpha
Helix 15
AB6
B
138 143Right-handed alpha
Helix 16
AB7
B
157 177Right-handed alpha
Helix 17
AB8
B
181 192Right-handed alpha
Helix 18
AB9
B
195 200Right-handed alpha
Helix 19
AC1
B
209 215Right-handed alpha
Helix 20
AC2
B
216 232Right-handed alpha
Helix 21
AC3
B
236 248Right-handed alpha
Helix 22
AC4
B
252 256Right-handed 310
Helix 23
AC5
B
263 289Right-handed alpha
Helix 24
AC6
B
298 302Right-handed 310
Helix 25
AC7
C
107 121Right-handed alpha
Helix 26
AC8
C
124 138Right-handed alpha
Helix 27
AC9
C
138 143Right-handed alpha
Helix 28
AD1
C
157 177Right-handed alpha
Helix 29
AD2
C
181 192Right-handed alpha
Helix 30
AD3
C
195 200Right-handed alpha
Helix 31
AD4
C
209 215Right-handed alpha
Helix 32
AD5
C
216 232Right-handed alpha
Helix 33
AD6
C
236 248Right-handed alpha
Helix 34
AD7
C
252 256Right-handed 310
Helix 35
AD8
C
263 289Right-handed alpha
Helix 36
AD9
C
298 302Right-handed 310
Helix 37
AE1
D
107 121Right-handed alpha
Helix 38
AE2
D
124 138Right-handed alpha
Helix 39
AE3
D
138 143Right-handed alpha
Helix 40
AE4
D
157 177Right-handed alpha
Helix 41
AE5
D
181 192Right-handed alpha
Helix 42
AE6
D
195 200Right-handed alpha
Helix 43
AE7
D
209 215Right-handed alpha
Helix 44
AE8
D
216 233Right-handed alpha
Helix 45
AE9
D
236 248Right-handed alpha
Helix 46
AF1
D
252 256Right-handed 310
Helix 47
AF2
D
263 289Right-handed alpha
Helix 48
AF3
D
298 302Right-handed 310
Helix 49
AF4
E
107 121Right-handed alpha
Helix 50
AF5
E
124 138Right-handed alpha
Helix 51
AF6
E
138 143Right-handed alpha
Helix 52
AF7
E
157 177Right-handed alpha
Helix 53
AF8
E
181 192Right-handed alpha
Helix 54
AF9
E
195 200Right-handed alpha
Helix 55
AG1
E
209 215Right-handed alpha
Helix 56
AG2
E
215 233Right-handed alpha
Helix 57
AG3
E
236 248Right-handed alpha
Helix 58
AG4
E
252 256Right-handed 310
Helix 59
AG5
E
263 289Right-handed alpha
Helix 60
AG6
E
298 302Right-handed 310
Helix 61
AG7
F
107 121Right-handed alpha
Helix 62
AG8
F
124 138Right-handed alpha
Helix 63
AG9
F
138 143Right-handed alpha
Helix 64
AH1
F
157 177Right-handed alpha
Helix 65
AH2
F
181 192Right-handed alpha
Helix 66
AH3
F
195 200Right-handed alpha
Helix 67
AH4
F
209 215Right-handed alpha
Helix 68
AH5
F
215 233Right-handed alpha
Helix 69
AH6
F
236 248Right-handed alpha
Helix 70
AH7
F
252 256Right-handed 310
Helix 71
AH8
F
263 289Right-handed alpha
Helix 72
AH9
F
298 302Right-handed 310
Back to top of page
There are no sheets in PDB entry 9OV1

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il