Analysis of interatomic Contacts of Structural Units in PDB entry:
9OVH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OVH entry

There are 2 chains in PDB entry 9OVH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 8LEU 328
B
 LEU 9ARG 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 9OVH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 37Right-handed alpha
Helix 2
AA2
A
48 64Right-handed alpha
Helix 3
AA3
A
66 71Right-handed alpha
Helix 4
AA4
A
72 82Right-handed 310
Helix 5
AA5
A
113 118Right-handed alpha
Helix 6
AA6
A
134 161Right-handed alpha
Helix 7
AA7
A
241 248Right-handed alpha
Helix 8
AA8
A
285 289Right-handed 310
Helix 9
AA9
A
312 325Right-handed alpha
Helix 10
AB1
B
15 18Right-handed 310
Helix 11
AB2
B
24 37Right-handed alpha
Helix 12
AB3
B
48 64Right-handed alpha
Helix 13
AB4
B
66 71Right-handed alpha
Helix 14
AB5
B
72 82Right-handed 310
Helix 15
AB6
B
113 118Right-handed alpha
Helix 16
AB7
B
134 161Right-handed alpha
Helix 17
AB8
B
241 248Right-handed alpha
Helix 18
AB9
B
312 325Right-handed alpha
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There are 6 sheets in PDB entry 9OVH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 13first strand
Strand 2
A
39 43parallel
Strand 3
A
236 240anti-parallel
Strand 4
A
206 211anti-parallel
Strand 5
A
267 275anti-parallel
Strand 6
A
177 185anti-parallel
Strand 7
A
101 106anti-parallel
Strand 8
A
84 86anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 93first strand
Strand 2
A
96 97anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 229first strand
Strand 2
A
217 219anti-parallel
Strand 3
A
257 259anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 13first strand
Strand 2
B
39 43parallel
Strand 3
B
236 240anti-parallel
Strand 4
B
206 211anti-parallel
Strand 5
B
267 275anti-parallel
Strand 6
B
177 185anti-parallel
Strand 7
B
101 106anti-parallel
Strand 8
B
84 86anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 93first strand
Strand 2
B
96 97anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
226 229first strand
Strand 2
B
217 220anti-parallel
Strand 3
B
257 259anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il