Analysis of interatomic Contacts of Structural Units in PDB entry:
9OW4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9OW4 entry

There are 6 chains in PDB entry 9OW4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 61	GLN 960
B	VAL 2	ASP 4
C	ALA 365	LEU 572
D	GLN 61	GLN 960
E	VAL 2	ASP 4
F	ALA 365	LEU 572

There are 98 helices in PDB entry 9OW4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	63	67	Right-handed 310
Helix 2	AA2	A	207	211	Right-handed 310
Helix 3	AA3	A	267	271	Right-handed 310
Helix 4	AA4	A	296	302	Right-handed alpha
Helix 5	AA5	A	305	323	Right-handed alpha
Helix 6	AA6	A	356	358	Right-handed 310
Helix 7	AA7	A	366	383	Right-handed alpha
Helix 8	AA8	A	394	397	Right-handed 310
Helix 9	AA9	A	398	417	Right-handed alpha
Helix 10	AB1	A	418	424	Right-handed 310
Helix 11	AB2	A	425	430	Right-handed alpha
Helix 12	AB3	A	430	439	Right-handed alpha
Helix 13	AB4	A	449	453	Right-handed 310
Helix 14	AB5	A	455	461	Right-handed alpha
Helix 15	AB6	A	464	481	Right-handed alpha
Helix 16	AB7	A	483	499	Right-handed alpha
Helix 17	AB8	A	504	517	Right-handed alpha
Helix 18	AB9	A	518	523	Right-handed 310
Helix 19	AC1	A	527	537	Right-handed alpha
Helix 20	AC2	A	617	620	Right-handed 310
Helix 21	AC3	A	628	643	Right-handed alpha
Helix 22	AC4	A	644	646	Right-handed 310
Helix 23	AC5	A	647	664	Right-handed alpha
Helix 24	AC6	A	668	675	Right-handed alpha
Helix 25	AC7	A	676	681	Right-handed 310
Helix 26	AC8	A	684	703	Right-handed alpha
Helix 27	AC9	A	707	730	Right-handed alpha
Helix 28	AD1	A	739	756	Right-handed alpha
Helix 29	AD2	A	758	774	Right-handed alpha
Helix 30	AD3	A	785	797	Right-handed alpha
Helix 31	AD4	A	798	811	Right-handed alpha
Helix 32	AD5	A	814	825	Right-handed alpha
Helix 33	AD6	A	826	828	Right-handed 310
Helix 34	AD7	A	830	842	Right-handed alpha
Helix 35	AD8	A	848	862	Right-handed alpha
Helix 36	AD9	A	864	876	Right-handed alpha
Helix 37	AE1	A	876	884	Right-handed alpha
Helix 38	AE2	A	890	900	Right-handed alpha
Helix 39	AE3	A	904	918	Right-handed alpha
Helix 40	AE4	A	923	925	Right-handed 310
Helix 41	AE5	A	926	959	Right-handed alpha
Helix 42	AE6	C	372	377	Right-handed 310
Helix 43	AE7	C	383	387	Right-handed 310
Helix 44	AE8	C	399	404	Right-handed alpha
Helix 45	AE9	C	417	422	Right-handed alpha
Helix 46	AF1	C	437	445	Right-handed 310
Helix 47	AF2	C	450	456	Right-handed alpha
Helix 48	AF3	C	473	480	Right-handed alpha
Helix 49	AF4	C	511	521	Right-handed alpha
Helix 50	AF5	D	63	67	Right-handed 310
Helix 51	AF6	D	207	211	Right-handed 310
Helix 52	AF7	D	267	271	Right-handed 310
Helix 53	AF8	D	296	302	Right-handed alpha
Helix 54	AF9	D	305	323	Right-handed alpha
Helix 55	AG1	D	356	358	Right-handed 310
Helix 56	AG2	D	366	383	Right-handed alpha
Helix 57	AG3	D	394	397	Right-handed 310
Helix 58	AG4	D	398	417	Right-handed alpha
Helix 59	AG5	D	418	424	Right-handed 310
Helix 60	AG6	D	425	430	Right-handed alpha
Helix 61	AG7	D	430	439	Right-handed alpha
Helix 62	AG8	D	449	453	Right-handed 310
Helix 63	AG9	D	455	461	Right-handed alpha
Helix 64	AH1	D	464	481	Right-handed alpha
Helix 65	AH2	D	483	499	Right-handed alpha
Helix 66	AH3	D	504	517	Right-handed alpha
Helix 67	AH4	D	518	523	Right-handed 310
Helix 68	AH5	D	527	537	Right-handed alpha
Helix 69	AH6	D	617	620	Right-handed 310
Helix 70	AH7	D	628	643	Right-handed alpha
Helix 71	AH8	D	644	646	Right-handed 310
Helix 72	AH9	D	647	664	Right-handed alpha
Helix 73	AI1	D	668	675	Right-handed alpha
Helix 74	AI2	D	676	681	Right-handed 310
Helix 75	AI3	D	684	703	Right-handed alpha
Helix 76	AI4	D	707	730	Right-handed alpha
Helix 77	AI5	D	739	756	Right-handed alpha
Helix 78	AI6	D	758	774	Right-handed alpha
Helix 79	AI7	D	785	797	Right-handed alpha
Helix 80	AI8	D	798	811	Right-handed alpha
Helix 81	AI9	D	814	825	Right-handed alpha
Helix 82	AJ1	D	826	828	Right-handed 310
Helix 83	AJ2	D	830	842	Right-handed alpha
Helix 84	AJ3	D	848	862	Right-handed alpha
Helix 85	AJ4	D	864	876	Right-handed alpha
Helix 86	AJ5	D	876	884	Right-handed alpha
Helix 87	AJ6	D	890	900	Right-handed alpha
Helix 88	AJ7	D	904	918	Right-handed alpha
Helix 89	AJ8	D	923	925	Right-handed 310
Helix 90	AJ9	D	926	959	Right-handed alpha
Helix 91	AK1	F	372	377	Right-handed 310
Helix 92	AK2	F	383	387	Right-handed 310
Helix 93	AK3	F	399	404	Right-handed alpha
Helix 94	AK4	F	417	422	Right-handed alpha
Helix 95	AK5	F	437	445	Right-handed 310
Helix 96	AK6	F	450	456	Right-handed alpha
Helix 97	AK7	F	473	480	Right-handed alpha
Helix 98	AK8	F	511	521	Right-handed alpha

There are 28 sheets in PDB entry 9OW4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	122	123	first strand
Strand 2	A	166	176	anti-parallel
Strand 3	A	129	133	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	122	123	first strand
Strand 2	A	166	176	anti-parallel
Strand 3	A	96	107	anti-parallel
Strand 4	A	74	86	anti-parallel
Strand 5	A	223	231	parallel
Strand 6	A	255	259	anti-parallel
Strand 7	A	247	248	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	117	first strand
Strand 2	A	152	157	anti-parallel
Strand 3	A	141	147	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	183	191	first strand
Strand 2	A	194	202	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	235	238	first strand
Strand 2	A	273	276	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	279	284	first strand
Strand 2	A	290	295	anti-parallel
Strand 3	A	331	337	parallel
Strand 4	A	350	354	parallel
Strand 5	A	344	345	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	390	392	first strand
Strand 2	A	501	503	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	599	601	first strand
Strand 2	A	552	557	anti-parallel
Strand 3	A	542	547	anti-parallel
Strand 4	A	624	627	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	577	580	first strand
Strand 2	A	592	595	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	587	588	first strand
Strand 2	A	582	584	anti-parallel
Strand 3	A	613	615	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	388	392	first strand
Strand 2	C	428	435	anti-parallel
Strand 3	C	551	561	anti-parallel
Strand 4	C	465	472	anti-parallel
Strand 5	C	407	414	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	388	392	first strand
Strand 2	C	428	435	anti-parallel
Strand 3	C	551	561	anti-parallel
Strand 4	C	547	548	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	395	397	first strand
Strand 2	C	569	571	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	489	496	first strand
Strand 2	C	535	543	anti-parallel
Strand 3	C	525	532	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	122	123	first strand
Strand 2	D	166	176	anti-parallel
Strand 3	D	129	133	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	122	123	first strand
Strand 2	D	166	176	anti-parallel
Strand 3	D	96	107	anti-parallel
Strand 4	D	74	86	anti-parallel
Strand 5	D	223	231	parallel
Strand 6	D	255	259	anti-parallel
Strand 7	D	247	248	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	113	117	first strand
Strand 2	D	152	157	anti-parallel
Strand 3	D	141	147	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	183	191	first strand
Strand 2	D	194	202	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	235	238	first strand
Strand 2	D	273	276	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	279	284	first strand
Strand 2	D	290	295	anti-parallel
Strand 3	D	331	337	parallel
Strand 4	D	350	354	parallel
Strand 5	D	344	345	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	390	392	first strand
Strand 2	D	501	503	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	599	601	first strand
Strand 2	D	552	557	anti-parallel
Strand 3	D	542	547	anti-parallel
Strand 4	D	624	627	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	577	580	first strand
Strand 2	D	592	595	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	587	588	first strand
Strand 2	D	582	584	anti-parallel
Strand 3	D	613	615	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	388	392	first strand
Strand 2	F	428	435	anti-parallel
Strand 3	F	551	561	anti-parallel
Strand 4	F	465	472	anti-parallel
Strand 5	F	407	414	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	388	392	first strand
Strand 2	F	428	435	anti-parallel
Strand 3	F	551	561	anti-parallel
Strand 4	F	547	548	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	395	397	first strand
Strand 2	F	569	571	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	489	496	first strand
Strand 2	F	535	543	anti-parallel
Strand 3	F	525	532	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9OW4

Analysis of interatomic Contacts of Structural Units in PDB entry:
9OW4