Analysis of interatomic Contacts of Structural Units in PDB entry:
9OW5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9OW5 entry

There are 3 chains in PDB entry 9OW5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 61	GLN 960
B	VAL 2	ASP 4
C	ALA 365	LEU 573

There are 50 helices in PDB entry 9OW5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	63	67	Right-handed 310
Helix 2	AA2	A	207	211	Right-handed 310
Helix 3	AA3	A	267	271	Right-handed 310
Helix 4	AA4	A	296	302	Right-handed alpha
Helix 5	AA5	A	305	323	Right-handed alpha
Helix 6	AA6	A	356	358	Right-handed 310
Helix 7	AA7	A	366	383	Right-handed alpha
Helix 8	AA8	A	394	397	Right-handed 310
Helix 9	AA9	A	398	417	Right-handed alpha
Helix 10	AB1	A	418	424	Right-handed 310
Helix 11	AB2	A	425	430	Right-handed alpha
Helix 12	AB3	A	430	439	Right-handed alpha
Helix 13	AB4	A	449	453	Right-handed 310
Helix 14	AB5	A	455	461	Right-handed alpha
Helix 15	AB6	A	464	481	Right-handed alpha
Helix 16	AB7	A	483	499	Right-handed alpha
Helix 17	AB8	A	504	517	Right-handed alpha
Helix 18	AB9	A	518	523	Right-handed 310
Helix 19	AC1	A	527	537	Right-handed alpha
Helix 20	AC2	A	617	620	Right-handed 310
Helix 21	AC3	A	628	643	Right-handed alpha
Helix 22	AC4	A	644	646	Right-handed 310
Helix 23	AC5	A	647	664	Right-handed alpha
Helix 24	AC6	A	668	675	Right-handed alpha
Helix 25	AC7	A	676	681	Right-handed 310
Helix 26	AC8	A	684	703	Right-handed alpha
Helix 27	AC9	A	707	730	Right-handed alpha
Helix 28	AD1	A	739	756	Right-handed alpha
Helix 29	AD2	A	758	774	Right-handed alpha
Helix 30	AD3	A	785	797	Right-handed alpha
Helix 31	AD4	A	798	811	Right-handed alpha
Helix 32	AD5	A	814	825	Right-handed alpha
Helix 33	AD6	A	826	828	Right-handed 310
Helix 34	AD7	A	830	842	Right-handed alpha
Helix 35	AD8	A	848	850	Right-handed 310
Helix 36	AD9	A	851	862	Right-handed alpha
Helix 37	AE1	A	864	876	Right-handed alpha
Helix 38	AE2	A	876	884	Right-handed alpha
Helix 39	AE3	A	890	900	Right-handed alpha
Helix 40	AE4	A	904	918	Right-handed alpha
Helix 41	AE5	A	923	925	Right-handed 310
Helix 42	AE6	A	926	959	Right-handed alpha
Helix 43	AE7	C	372	377	Right-handed 310
Helix 44	AE8	C	383	387	Right-handed 310
Helix 45	AE9	C	399	404	Right-handed alpha
Helix 46	AF1	C	417	422	Right-handed alpha
Helix 47	AF2	C	437	445	Right-handed 310
Helix 48	AF3	C	450	456	Right-handed alpha
Helix 49	AF4	C	473	481	Right-handed alpha
Helix 50	AF5	C	511	521	Right-handed alpha

There are 13 sheets in PDB entry 9OW5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	122	123	first strand
Strand 2	A	166	176	anti-parallel
Strand 3	A	129	133	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	122	123	first strand
Strand 2	A	166	176	anti-parallel
Strand 3	A	96	107	anti-parallel
Strand 4	A	74	86	anti-parallel
Strand 5	A	223	231	parallel
Strand 6	A	255	259	anti-parallel
Strand 7	A	247	248	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	117	first strand
Strand 2	A	152	157	anti-parallel
Strand 3	A	141	147	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	183	191	first strand
Strand 2	A	194	202	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	235	238	first strand
Strand 2	A	273	276	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	279	284	first strand
Strand 2	A	290	295	anti-parallel
Strand 3	A	331	337	parallel
Strand 4	A	350	354	parallel
Strand 5	A	344	345	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	390	392	first strand
Strand 2	A	501	503	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	599	601	first strand
Strand 2	A	552	557	anti-parallel
Strand 3	A	542	546	anti-parallel
Strand 4	A	624	627	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	577	580	first strand
Strand 2	A	592	595	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	587	588	first strand
Strand 2	A	582	584	anti-parallel
Strand 3	A	613	615	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	388	392	first strand
Strand 2	C	428	435	anti-parallel
Strand 3	C	553	562	anti-parallel
Strand 4	C	465	472	anti-parallel
Strand 5	C	407	414	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	395	397	first strand
Strand 2	C	570	572	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	489	496	first strand
Strand 2	C	535	543	anti-parallel
Strand 3	C	525	532	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9OW5

Analysis of interatomic Contacts of Structural Units in PDB entry:
9OW5