Analysis of interatomic Contacts of Structural Units in PDB entry:
9OX7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9OX7 entry

There are 8 chains in PDB entry 9OX7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	MET 1	ALA 430
D	MET 1	ALA 430
E	MET 1	ALA 430
F	MET 1	ALA 430
A	MET 1	SER 439
C	MET 1	SER 439
G	MET 1	SER 439
H	MET 1	SER 439

There are164 helices in PDB entry 9OX7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	10	29	Right-handed alpha
Helix 2	AA2	B	41	46	Right-handed alpha
Helix 3	AA3	B	47	49	Right-handed 310
Helix 4	AA4	B	70	78	Right-handed alpha
Helix 5	AA5	B	81	85	Right-handed 310
Helix 6	AA6	B	86	88	Right-handed 310
Helix 7	AA7	B	100	106	Right-handed alpha
Helix 8	AA8	B	107	127	Right-handed alpha
Helix 9	AA9	B	142	159	Right-handed alpha
Helix 10	AB1	B	180	196	Right-handed alpha
Helix 11	AB2	B	204	214	Right-handed alpha
Helix 12	AB3	B	221	237	Right-handed alpha
Helix 13	AB4	B	249	258	Right-handed alpha
Helix 14	AB5	B	275	282	Right-handed alpha
Helix 15	AB6	B	285	295	Right-handed alpha
Helix 16	AB7	B	296	299	Right-handed 310
Helix 17	AB8	B	304	308	Right-handed 310
Helix 18	AB9	B	322	337	Right-handed alpha
Helix 19	AC1	B	338	341	Right-handed 310
Helix 20	AC2	B	373	390	Right-handed alpha
Helix 21	AC3	B	394	401	Right-handed alpha
Helix 22	AC4	B	404	426	Right-handed alpha
Helix 23	AC5	D	10	28	Right-handed alpha
Helix 24	AC6	D	40	46	Right-handed alpha
Helix 25	AC7	D	47	49	Right-handed 310
Helix 26	AC8	D	70	78	Right-handed alpha
Helix 27	AC9	D	81	85	Right-handed 310
Helix 28	AD1	D	86	88	Right-handed 310
Helix 29	AD2	D	100	106	Right-handed alpha
Helix 30	AD3	D	107	127	Right-handed alpha
Helix 31	AD4	D	142	159	Right-handed alpha
Helix 32	AD5	D	180	196	Right-handed alpha
Helix 33	AD6	D	204	213	Right-handed alpha
Helix 34	AD7	D	221	237	Right-handed alpha
Helix 35	AD8	D	249	258	Right-handed alpha
Helix 36	AD9	D	275	282	Right-handed alpha
Helix 37	AE1	D	285	294	Right-handed alpha
Helix 38	AE2	D	295	299	Right-handed 310
Helix 39	AE3	D	304	308	Right-handed 310
Helix 40	AE4	D	322	337	Right-handed alpha
Helix 41	AE5	D	338	341	Right-handed 310
Helix 42	AE6	D	373	390	Right-handed alpha
Helix 43	AE7	D	394	401	Right-handed alpha
Helix 44	AE8	D	404	426	Right-handed alpha
Helix 45	AE9	E	10	29	Right-handed alpha
Helix 46	AF1	E	40	46	Right-handed alpha
Helix 47	AF2	E	47	49	Right-handed 310
Helix 48	AF3	E	70	78	Right-handed alpha
Helix 49	AF4	E	81	85	Right-handed 310
Helix 50	AF5	E	86	88	Right-handed 310
Helix 51	AF6	E	100	106	Right-handed alpha
Helix 52	AF7	E	107	127	Right-handed alpha
Helix 53	AF8	E	142	159	Right-handed alpha
Helix 54	AF9	E	180	196	Right-handed alpha
Helix 55	AG1	E	204	214	Right-handed alpha
Helix 56	AG2	E	221	237	Right-handed alpha
Helix 57	AG3	E	249	258	Right-handed alpha
Helix 58	AG4	E	275	282	Right-handed alpha
Helix 59	AG5	E	285	295	Right-handed alpha
Helix 60	AG6	E	296	299	Right-handed 310
Helix 61	AG7	E	304	308	Right-handed 310
Helix 62	AG8	E	322	337	Right-handed alpha
Helix 63	AG9	E	338	341	Right-handed 310
Helix 64	AH1	E	373	390	Right-handed alpha
Helix 65	AH2	E	394	401	Right-handed alpha
Helix 66	AH3	E	404	426	Right-handed alpha
Helix 67	AH4	F	10	29	Right-handed alpha
Helix 68	AH5	F	41	46	Right-handed alpha
Helix 69	AH6	F	47	49	Right-handed 310
Helix 70	AH7	F	70	78	Right-handed alpha
Helix 71	AH8	F	86	88	Right-handed 310
Helix 72	AH9	F	100	106	Right-handed alpha
Helix 73	AI1	F	107	127	Right-handed alpha
Helix 74	AI2	F	142	159	Right-handed alpha
Helix 75	AI3	F	180	196	Right-handed alpha
Helix 76	AI4	F	204	213	Right-handed alpha
Helix 77	AI5	F	221	237	Right-handed alpha
Helix 78	AI6	F	249	258	Right-handed alpha
Helix 79	AI7	F	275	282	Right-handed alpha
Helix 80	AI8	F	285	294	Right-handed alpha
Helix 81	AI9	F	295	299	Right-handed 310
Helix 82	AJ1	F	304	308	Right-handed 310
Helix 83	AJ2	F	322	337	Right-handed alpha
Helix 84	AJ3	F	338	341	Right-handed 310
Helix 85	AJ4	F	373	390	Right-handed alpha
Helix 86	AJ5	F	394	401	Right-handed alpha
Helix 87	AJ6	F	404	426	Right-handed alpha
Helix 88	AJ7	A	10	28	Right-handed alpha
Helix 89	AJ8	A	45	51	Right-handed 310
Helix 90	AJ9	A	72	81	Right-handed alpha
Helix 91	AK1	A	88	90	Right-handed 310
Helix 92	AK2	A	102	108	Right-handed alpha
Helix 93	AK3	A	111	127	Right-handed alpha
Helix 94	AK4	A	143	161	Right-handed alpha
Helix 95	AK5	A	182	190	Right-handed alpha
Helix 96	AK6	A	190	197	Right-handed alpha
Helix 97	AK7	A	206	216	Right-handed alpha
Helix 98	AK8	A	223	244	Right-handed alpha
Helix 99	AK9	A	251	260	Right-handed alpha
Helix 100	AL1	A	280	284	Right-handed 310
Helix 101	AL2	A	287	295	Right-handed alpha
Helix 102	AL3	A	296	301	Right-handed 310
Helix 103	AL4	A	306	310	Right-handed 310
Helix 104	AL5	A	324	338	Right-handed alpha
Helix 105	AL6	A	383	400	Right-handed alpha
Helix 106	AL7	A	404	410	Right-handed alpha
Helix 107	AL8	A	415	435	Right-handed alpha
Helix 108	AL9	C	10	28	Right-handed alpha
Helix 109	AM1	C	45	51	Right-handed 310
Helix 110	AM2	C	72	81	Right-handed alpha
Helix 111	AM3	C	102	108	Right-handed alpha
Helix 112	AM4	C	111	127	Right-handed alpha
Helix 113	AM5	C	143	161	Right-handed alpha
Helix 114	AM6	C	182	190	Right-handed alpha
Helix 115	AM7	C	190	197	Right-handed alpha
Helix 116	AM8	C	206	216	Right-handed alpha
Helix 117	AM9	C	223	244	Right-handed alpha
Helix 118	AN1	C	251	260	Right-handed alpha
Helix 119	AN2	C	280	284	Right-handed 310
Helix 120	AN3	C	287	295	Right-handed alpha
Helix 121	AN4	C	296	301	Right-handed 310
Helix 122	AN5	C	306	310	Right-handed 310
Helix 123	AN6	C	324	338	Right-handed alpha
Helix 124	AN7	C	383	401	Right-handed alpha
Helix 125	AN8	C	404	411	Right-handed alpha
Helix 126	AN9	C	415	435	Right-handed alpha
Helix 127	AO1	G	10	28	Right-handed alpha
Helix 128	AO2	G	45	51	Right-handed 310
Helix 129	AO3	G	72	81	Right-handed alpha
Helix 130	AO4	G	88	90	Right-handed 310
Helix 131	AO5	G	102	108	Right-handed alpha
Helix 132	AO6	G	111	127	Right-handed alpha
Helix 133	AO7	G	143	161	Right-handed alpha
Helix 134	AO8	G	182	197	Right-handed alpha
Helix 135	AO9	G	206	216	Right-handed alpha
Helix 136	AP1	G	223	244	Right-handed alpha
Helix 137	AP2	G	251	260	Right-handed alpha
Helix 138	AP3	G	277	282	Right-handed alpha
Helix 139	AP4	G	287	296	Right-handed alpha
Helix 140	AP5	G	297	301	Right-handed 310
Helix 141	AP6	G	324	338	Right-handed alpha
Helix 142	AP7	G	383	402	Right-handed alpha
Helix 143	AP8	G	404	411	Right-handed alpha
Helix 144	AP9	G	414	436	Right-handed alpha
Helix 145	AQ1	H	10	28	Right-handed alpha
Helix 146	AQ2	H	47	51	Right-handed 310
Helix 147	AQ3	H	72	81	Right-handed alpha
Helix 148	AQ4	H	88	90	Right-handed 310
Helix 149	AQ5	H	102	108	Right-handed alpha
Helix 150	AQ6	H	111	128	Right-handed alpha
Helix 151	AQ7	H	143	161	Right-handed alpha
Helix 152	AQ8	H	182	190	Right-handed alpha
Helix 153	AQ9	H	190	197	Right-handed alpha
Helix 154	AR1	H	206	216	Right-handed alpha
Helix 155	AR2	H	223	244	Right-handed alpha
Helix 156	AR3	H	251	260	Right-handed alpha
Helix 157	AR4	H	280	284	Right-handed 310
Helix 158	AR5	H	287	295	Right-handed alpha
Helix 159	AR6	H	296	301	Right-handed 310
Helix 160	AR7	H	306	310	Right-handed 310
Helix 161	AR8	H	324	338	Right-handed alpha
Helix 162	AR9	H	383	400	Right-handed alpha
Helix 163	AS1	H	404	411	Right-handed alpha
Helix 164	AS2	H	415	435	Right-handed alpha

There are 20 sheets in PDB entry 9OX7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	92	first strand
Strand 2	B	63	67	parallel
Strand 3	B	3	9	parallel
Strand 4	B	130	138	parallel
Strand 5	B	163	170	parallel
Strand 6	B	198	203	parallel
Strand 7	B	265	271	parallel
Strand 8	B	364	371	anti-parallel
Strand 9	B	310	318	anti-parallel
Strand 10	B	349	354	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	54	first strand
Strand 2	B	58	61	anti-parallel

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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	90	92	first strand
Strand 2	D	63	67	parallel
Strand 3	D	3	9	parallel
Strand 4	D	130	138	parallel
Strand 5	D	163	170	parallel
Strand 6	D	198	203	parallel
Strand 7	D	265	271	parallel
Strand 8	D	364	371	anti-parallel
Strand 9	D	310	318	anti-parallel
Strand 10	D	349	354	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	51	54	first strand
Strand 2	D	58	61	anti-parallel

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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	90	92	first strand
Strand 2	E	63	67	parallel
Strand 3	E	3	9	parallel
Strand 4	E	130	138	parallel
Strand 5	E	163	170	parallel
Strand 6	E	198	203	parallel
Strand 7	E	265	271	parallel
Strand 8	E	364	371	anti-parallel
Strand 9	E	310	318	anti-parallel
Strand 10	E	349	354	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	51	53	first strand
Strand 2	E	59	61	anti-parallel

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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	90	92	first strand
Strand 2	F	63	67	parallel
Strand 3	F	3	9	parallel
Strand 4	F	130	138	parallel
Strand 5	F	163	170	parallel
Strand 6	F	198	203	parallel
Strand 7	F	265	271	parallel
Strand 8	F	364	371	anti-parallel
Strand 9	F	310	318	anti-parallel
Strand 10	F	349	354	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	51	53	first strand
Strand 2	F	59	61	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	94	first strand
Strand 2	A	65	69	parallel
Strand 3	A	4	9	parallel
Strand 4	A	134	140	parallel
Strand 5	A	165	172	parallel
Strand 6	A	200	205	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	55	first strand
Strand 2	A	61	63	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	272	273	first strand
Strand 2	A	373	381	anti-parallel
Strand 3	A	312	321	anti-parallel
Strand 4	A	351	356	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	92	94	first strand
Strand 2	C	65	69	parallel
Strand 3	C	4	9	parallel
Strand 4	C	134	140	parallel
Strand 5	C	165	172	parallel
Strand 6	C	200	205	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	55	first strand
Strand 2	C	61	63	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	246	248	first strand
Strand 2	C	351	356	anti-parallel
Strand 3	C	312	321	parallel
Strand 4	C	373	381	anti-parallel
Strand 5	C	269	273	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	92	94	first strand
Strand 2	G	65	69	parallel
Strand 3	G	4	9	parallel
Strand 4	G	134	140	parallel
Strand 5	G	165	172	parallel
Strand 6	G	200	205	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	53	55	first strand
Strand 2	G	61	63	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	269	273	first strand
Strand 2	G	373	381	anti-parallel
Strand 3	G	312	321	anti-parallel
Strand 4	G	351	356	parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	92	94	first strand
Strand 2	H	65	69	parallel
Strand 3	H	4	9	parallel
Strand 4	H	134	140	parallel
Strand 5	H	165	172	parallel
Strand 6	H	200	205	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	53	55	first strand
Strand 2	H	61	63	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	246	248	first strand
Strand 2	H	351	356	anti-parallel
Strand 3	H	312	321	parallel
Strand 4	H	373	381	anti-parallel
Strand 5	H	269	273	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9OX7

Analysis of interatomic Contacts of Structural Units in PDB entry:
9OX7