Analysis of interatomic Contacts of Structural Units in PDB entry:
9OYZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9OYZ entry

There is 1 chain in PDB entry 9OYZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	CYS 24	ALA 1044

There are 8 helices in PDB entry 9OYZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	29	38	Right-handed alpha
Helix 2	AA2	B	49	64	Right-handed alpha
Helix 3	AA3	B	65	70	Right-handed 310
Helix 4	AA4	B	71	80	Right-handed alpha
Helix 5	AA5	B	82	108	Right-handed alpha
Helix 6	AA6	B	364	368	Right-handed 310
Helix 7	AA7	B	563	567	Right-handed 310
Helix 8	AA8	B	931	935	Right-handed 310

There are 23 sheets in PDB entry 9OYZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	42	first strand
Strand 2	B	780	785	parallel
Strand 3	B	769	774	anti-parallel
Strand 4	B	760	764	anti-parallel
Strand 5	B	751	755	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	115	119	first strand
Strand 2	B	124	127	anti-parallel
Strand 3	B	161	164	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	157	first strand
Strand 2	B	137	144	anti-parallel
Strand 3	B	172	180	anti-parallel
Strand 4	B	186	188	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	157	first strand
Strand 2	B	137	144	anti-parallel
Strand 3	B	172	180	anti-parallel
Strand 4	B	195	196	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	208	216	first strand
Strand 2	B	219	225	anti-parallel
Strand 3	B	256	260	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	247	252	first strand
Strand 2	B	234	242	anti-parallel
Strand 3	B	267	276	anti-parallel
Strand 4	B	284	289	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	323	324	first strand
Strand 2	B	309	314	anti-parallel
Strand 3	B	301	306	anti-parallel
Strand 4	B	556	562	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	334	340	first strand
Strand 2	B	345	350	anti-parallel
Strand 3	B	353	358	anti-parallel
Strand 4	B	369	373	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	378	384	first strand
Strand 2	B	389	394	anti-parallel
Strand 3	B	397	402	anti-parallel
Strand 4	B	410	411	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	423	426	first strand
Strand 2	B	431	435	anti-parallel
Strand 3	B	439	444	anti-parallel
Strand 4	B	455	460	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	467	470	first strand
Strand 2	B	475	480	anti-parallel
Strand 3	B	485	488	anti-parallel
Strand 4	B	497	500	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	510	514	first strand
Strand 2	B	517	521	anti-parallel
Strand 3	B	526	530	anti-parallel
Strand 4	B	538	542	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	576	582	first strand
Strand 2	B	586	592	anti-parallel
Strand 3	B	633	637	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	623	629	first strand
Strand 2	B	609	616	anti-parallel
Strand 3	B	644	653	anti-parallel
Strand 4	B	656	657	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	623	629	first strand
Strand 2	B	609	616	anti-parallel
Strand 3	B	644	653	anti-parallel
Strand 4	B	664	667	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	698	701	first strand
Strand 2	B	686	689	anti-parallel
Strand 3	B	677	681	anti-parallel
Strand 4	B	926	930	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	710	712	first strand
Strand 2	B	716	720	anti-parallel
Strand 3	B	726	730	anti-parallel
Strand 4	B	741	742	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	790	796	first strand
Strand 2	B	801	806	anti-parallel
Strand 3	B	809	814	anti-parallel
Strand 4	B	821	825	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	832	840	first strand
Strand 2	B	845	852	anti-parallel
Strand 3	B	855	862	anti-parallel
Strand 4	B	874	880	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	884	891	first strand
Strand 2	B	895	900	anti-parallel
Strand 3	B	905	909	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	958	961	first strand
Strand 2	B	966	969	anti-parallel
Strand 3	B	1010	1013	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	982	983	first strand
Strand 2	B	1028	1030	anti-parallel
Strand 3	B	1033	1034	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1021	1026	first strand
Strand 2	B	1038	1043	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9OYZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
9OYZ