Analysis of interatomic Contacts of Structural Units in PDB entry:
9OZ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9OZ4 entry

There are 2 chains in PDB entry 9OZ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 299
B
 MET 1LEU 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9OZ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 30Right-handed alpha
Helix 2
AA2
A
31 36Right-handed alpha
Helix 3
AA3
A
46 56Right-handed alpha
Helix 4
AA4
A
66 75Right-handed alpha
Helix 5
AA5
A
76 80Right-handed 310
Helix 6
AA6
A
105 108Right-handed 310
Helix 7
AA7
A
111 116Right-handed 310
Helix 8
AA8
A
127 140Right-handed alpha
Helix 9
AA9
A
143 147Right-handed 310
Helix 10
AB1
A
157 164Right-handed alpha
Helix 11
AB2
A
178 188Right-handed alpha
Helix 12
AB3
A
197 207Right-handed alpha
Helix 13
AB4
A
243 256Right-handed alpha
Helix 14
AB5
A
257 264Right-handed alpha
Helix 15
AB6
A
265 269Right-handed 310
Helix 16
AB7
A
272 277Right-handed alpha
Helix 17
AB8
A
286 297Right-handed alpha
Helix 18
AB9
B
16 30Right-handed alpha
Helix 19
AC1
B
31 36Right-handed alpha
Helix 20
AC2
B
46 56Right-handed alpha
Helix 21
AC3
B
66 75Right-handed alpha
Helix 22
AC4
B
76 80Right-handed 310
Helix 23
AC5
B
105 108Right-handed 310
Helix 24
AC6
B
111 116Right-handed 310
Helix 25
AC7
B
127 141Right-handed alpha
Helix 26
AC8
B
143 147Right-handed 310
Helix 27
AC9
B
157 164Right-handed alpha
Helix 28
AD1
B
178 189Right-handed alpha
Helix 29
AD2
B
197 207Right-handed alpha
Helix 30
AD3
B
243 257Right-handed alpha
Helix 31
AD4
B
257 264Right-handed alpha
Helix 32
AD5
B
265 269Right-handed 310
Helix 33
AD6
B
272 277Right-handed alpha
Helix 34
AD7
B
286 297Right-handed alpha
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There are 4 sheets in PDB entry 9OZ4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 42first strand
Strand 2
A
4 9parallel
Strand 3
A
61 65parallel
Strand 4
A
227 239anti-parallel
Strand 5
A
88 103anti-parallel
Strand 6
A
191 193anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 151first strand
Strand 2
A
119 121parallel
Strand 3
A
169 173parallel
Strand 4
A
88 103anti-parallel
Strand 5
A
227 239anti-parallel
Strand 6
A
211 215anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 42first strand
Strand 2
B
4 9parallel
Strand 3
B
61 65parallel
Strand 4
B
227 239anti-parallel
Strand 5
B
88 103anti-parallel
Strand 6
B
191 193anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
149 151first strand
Strand 2
B
119 121parallel
Strand 3
B
169 173parallel
Strand 4
B
88 103anti-parallel
Strand 5
B
227 239anti-parallel
Strand 6
B
211 215anti-parallel
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