Analysis of interatomic Contacts of Structural Units in PDB entry:
9P01

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9P01 entry

There are 6 chains in PDB entry 9P01 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 196	PHE 768
B	ASN 196	PHE 768
F	ASN 196	PHE 768
E	ASN 196	PHE 768
D	ASN 196	PHE 768
C	ASN 196	PHE 768

There are190 helices in PDB entry 9P01. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	199	203	Right-handed 310
Helix 2	AA2	A	206	218	Right-handed alpha
Helix 3	AA3	A	218	223	Right-handed alpha
Helix 4	AA4	A	223	231	Right-handed alpha
Helix 5	AA5	A	247	259	Right-handed alpha
Helix 6	AA6	A	268	274	Right-handed alpha
Helix 7	AA7	A	275	293	Right-handed alpha
Helix 8	AA8	A	302	307	Right-handed alpha
Helix 9	AA9	A	315	331	Right-handed alpha
Helix 10	AB1	A	346	350	Right-handed 310
Helix 11	AB2	A	351	355	Right-handed 310
Helix 12	AB3	A	370	382	Right-handed alpha
Helix 13	AB4	A	392	400	Right-handed alpha
Helix 14	AB5	A	404	427	Right-handed alpha
Helix 15	AB6	A	435	441	Right-handed alpha
Helix 16	AB7	A	445	456	Right-handed alpha
Helix 17	AB8	A	472	476	Right-handed 310
Helix 18	AB9	A	479	496	Right-handed alpha
Helix 19	AC1	A	496	504	Right-handed alpha
Helix 20	AC2	A	520	532	Right-handed alpha
Helix 21	AC3	A	540	547	Right-handed alpha
Helix 22	AC4	A	555	566	Right-handed alpha
Helix 23	AC5	A	576	582	Right-handed alpha
Helix 24	AC6	A	594	608	Right-handed alpha
Helix 25	AC7	A	622	626	Right-handed 310
Helix 26	AC8	A	627	632	Right-handed 310
Helix 27	AC9	A	646	658	Right-handed alpha
Helix 28	AD1	A	668	676	Right-handed alpha
Helix 29	AD2	A	680	709	Right-handed alpha
Helix 30	AD3	A	728	736	Right-handed alpha
Helix 31	AD4	A	744	755	Right-handed alpha
Helix 32	AD5	A	764	768	Right-handed 310
Helix 33	AD6	B	199	203	Right-handed 310
Helix 34	AD7	B	206	223	Right-handed alpha
Helix 35	AD8	B	223	231	Right-handed alpha
Helix 36	AD9	B	247	259	Right-handed alpha
Helix 37	AE1	B	268	274	Right-handed alpha
Helix 38	AE2	B	275	293	Right-handed alpha
Helix 39	AE3	B	302	307	Right-handed alpha
Helix 40	AE4	B	315	331	Right-handed alpha
Helix 41	AE5	B	346	350	Right-handed 310
Helix 42	AE6	B	351	356	Right-handed 310
Helix 43	AE7	B	370	382	Right-handed alpha
Helix 44	AE8	B	392	400	Right-handed alpha
Helix 45	AE9	B	404	427	Right-handed alpha
Helix 46	AF1	B	435	441	Right-handed alpha
Helix 47	AF2	B	445	456	Right-handed alpha
Helix 48	AF3	B	472	476	Right-handed 310
Helix 49	AF4	B	479	496	Right-handed alpha
Helix 50	AF5	B	496	504	Right-handed alpha
Helix 51	AF6	B	520	532	Right-handed alpha
Helix 52	AF7	B	541	547	Right-handed alpha
Helix 53	AF8	B	555	566	Right-handed alpha
Helix 54	AF9	B	576	582	Right-handed alpha
Helix 55	AG1	B	594	607	Right-handed alpha
Helix 56	AG2	B	622	626	Right-handed 310
Helix 57	AG3	B	627	632	Right-handed 310
Helix 58	AG4	B	646	658	Right-handed alpha
Helix 59	AG5	B	668	676	Right-handed alpha
Helix 60	AG6	B	680	708	Right-handed alpha
Helix 61	AG7	B	728	738	Right-handed alpha
Helix 62	AG8	B	744	758	Right-handed alpha
Helix 63	AG9	B	764	768	Right-handed 310
Helix 64	AH1	F	199	203	Right-handed 310
Helix 65	AH2	F	206	218	Right-handed alpha
Helix 66	AH3	F	218	223	Right-handed alpha
Helix 67	AH4	F	223	231	Right-handed alpha
Helix 68	AH5	F	247	259	Right-handed alpha
Helix 69	AH6	F	268	274	Right-handed alpha
Helix 70	AH7	F	275	293	Right-handed alpha
Helix 71	AH8	F	302	307	Right-handed alpha
Helix 72	AH9	F	315	331	Right-handed alpha
Helix 73	AI1	F	346	350	Right-handed 310
Helix 74	AI2	F	351	356	Right-handed 310
Helix 75	AI3	F	370	382	Right-handed alpha
Helix 76	AI4	F	392	400	Right-handed alpha
Helix 77	AI5	F	404	427	Right-handed alpha
Helix 78	AI6	F	435	441	Right-handed alpha
Helix 79	AI7	F	445	456	Right-handed alpha
Helix 80	AI8	F	472	476	Right-handed 310
Helix 81	AI9	F	479	496	Right-handed alpha
Helix 82	AJ1	F	496	504	Right-handed alpha
Helix 83	AJ2	F	520	532	Right-handed alpha
Helix 84	AJ3	F	541	547	Right-handed alpha
Helix 85	AJ4	F	555	566	Right-handed alpha
Helix 86	AJ5	F	576	582	Right-handed alpha
Helix 87	AJ6	F	594	608	Right-handed alpha
Helix 88	AJ7	F	627	632	Right-handed 310
Helix 89	AJ8	F	646	658	Right-handed alpha
Helix 90	AJ9	F	668	676	Right-handed alpha
Helix 91	AK1	F	680	709	Right-handed alpha
Helix 92	AK2	F	728	736	Right-handed alpha
Helix 93	AK3	F	744	755	Right-handed alpha
Helix 94	AK4	E	199	203	Right-handed 310
Helix 95	AK5	E	206	218	Right-handed alpha
Helix 96	AK6	E	218	223	Right-handed alpha
Helix 97	AK7	E	223	231	Right-handed alpha
Helix 98	AK8	E	247	259	Right-handed alpha
Helix 99	AK9	E	268	273	Right-handed alpha
Helix 100	AL1	E	275	293	Right-handed alpha
Helix 101	AL2	E	302	307	Right-handed alpha
Helix 102	AL3	E	309	313	Right-handed 310
Helix 103	AL4	E	315	331	Right-handed alpha
Helix 104	AL5	E	346	350	Right-handed 310
Helix 105	AL6	E	351	356	Right-handed 310
Helix 106	AL7	E	370	382	Right-handed alpha
Helix 107	AL8	E	392	400	Right-handed alpha
Helix 108	AL9	E	404	427	Right-handed alpha
Helix 109	AM1	E	435	441	Right-handed alpha
Helix 110	AM2	E	445	456	Right-handed alpha
Helix 111	AM3	E	472	476	Right-handed 310
Helix 112	AM4	E	479	496	Right-handed alpha
Helix 113	AM5	E	496	504	Right-handed alpha
Helix 114	AM6	E	520	532	Right-handed alpha
Helix 115	AM7	E	541	547	Right-handed alpha
Helix 116	AM8	E	555	566	Right-handed alpha
Helix 117	AM9	E	576	582	Right-handed alpha
Helix 118	AN1	E	594	607	Right-handed alpha
Helix 119	AN2	E	622	626	Right-handed 310
Helix 120	AN3	E	627	632	Right-handed 310
Helix 121	AN4	E	646	658	Right-handed alpha
Helix 122	AN5	E	668	676	Right-handed alpha
Helix 123	AN6	E	680	709	Right-handed alpha
Helix 124	AN7	E	728	736	Right-handed alpha
Helix 125	AN8	E	744	758	Right-handed alpha
Helix 126	AN9	E	764	768	Right-handed 310
Helix 127	AO1	D	199	203	Right-handed 310
Helix 128	AO2	D	206	218	Right-handed alpha
Helix 129	AO3	D	218	223	Right-handed alpha
Helix 130	AO4	D	223	231	Right-handed alpha
Helix 131	AO5	D	247	259	Right-handed alpha
Helix 132	AO6	D	268	274	Right-handed alpha
Helix 133	AO7	D	275	293	Right-handed alpha
Helix 134	AO8	D	302	307	Right-handed alpha
Helix 135	AO9	D	315	331	Right-handed alpha
Helix 136	AP1	D	346	350	Right-handed 310
Helix 137	AP2	D	351	355	Right-handed 310
Helix 138	AP3	D	370	382	Right-handed alpha
Helix 139	AP4	D	392	400	Right-handed alpha
Helix 140	AP5	D	404	427	Right-handed alpha
Helix 141	AP6	D	435	441	Right-handed alpha
Helix 142	AP7	D	445	456	Right-handed alpha
Helix 143	AP8	D	472	476	Right-handed 310
Helix 144	AP9	D	479	496	Right-handed alpha
Helix 145	AQ1	D	496	504	Right-handed alpha
Helix 146	AQ2	D	520	532	Right-handed alpha
Helix 147	AQ3	D	540	547	Right-handed alpha
Helix 148	AQ4	D	555	566	Right-handed alpha
Helix 149	AQ5	D	576	582	Right-handed alpha
Helix 150	AQ6	D	594	608	Right-handed alpha
Helix 151	AQ7	D	622	626	Right-handed 310
Helix 152	AQ8	D	627	632	Right-handed 310
Helix 153	AQ9	D	646	658	Right-handed alpha
Helix 154	AR1	D	668	676	Right-handed alpha
Helix 155	AR2	D	680	709	Right-handed alpha
Helix 156	AR3	D	728	736	Right-handed alpha
Helix 157	AR4	D	744	758	Right-handed alpha
Helix 158	AR5	D	764	768	Right-handed 310
Helix 159	AR6	C	199	203	Right-handed 310
Helix 160	AR7	C	206	218	Right-handed alpha
Helix 161	AR8	C	218	223	Right-handed alpha
Helix 162	AR9	C	223	231	Right-handed alpha
Helix 163	AS1	C	247	259	Right-handed alpha
Helix 164	AS2	C	268	274	Right-handed alpha
Helix 165	AS3	C	275	293	Right-handed alpha
Helix 166	AS4	C	302	307	Right-handed alpha
Helix 167	AS5	C	309	313	Right-handed 310
Helix 168	AS6	C	315	331	Right-handed alpha
Helix 169	AS7	C	346	350	Right-handed 310
Helix 170	AS8	C	351	356	Right-handed 310
Helix 171	AS9	C	370	382	Right-handed alpha
Helix 172	AT1	C	392	400	Right-handed alpha
Helix 173	AT2	C	404	427	Right-handed alpha
Helix 174	AT3	C	435	440	Right-handed alpha
Helix 175	AT4	C	445	456	Right-handed alpha
Helix 176	AT5	C	472	476	Right-handed 310
Helix 177	AT6	C	479	496	Right-handed alpha
Helix 178	AT7	C	496	504	Right-handed alpha
Helix 179	AT8	C	520	532	Right-handed alpha
Helix 180	AT9	C	541	547	Right-handed alpha
Helix 181	AU1	C	555	566	Right-handed alpha
Helix 182	AU2	C	576	582	Right-handed alpha
Helix 183	AU3	C	594	608	Right-handed alpha
Helix 184	AU4	C	627	632	Right-handed 310
Helix 185	AU5	C	646	658	Right-handed alpha
Helix 186	AU6	C	668	676	Right-handed alpha
Helix 187	AU7	C	680	709	Right-handed alpha
Helix 188	AU8	C	728	736	Right-handed alpha
Helix 189	AU9	C	744	755	Right-handed alpha
Helix 190	AV1	C	764	768	Right-handed 310

There are 12 sheets in PDB entry 9P01. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	262	267	first strand
Strand 2	A	296	301	parallel
Strand 3	A	338	344	parallel
Strand 4	A	237	241	parallel
Strand 5	A	362	365	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	535	538	first strand
Strand 2	A	569	573	parallel
Strand 3	A	614	620	parallel
Strand 4	A	510	514	parallel
Strand 5	A	638	641	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	262	267	first strand
Strand 2	B	296	301	parallel
Strand 3	B	338	344	parallel
Strand 4	B	237	241	parallel
Strand 5	B	362	365	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	535	540	first strand
Strand 2	B	569	574	parallel
Strand 3	B	614	620	parallel
Strand 4	B	510	514	parallel
Strand 5	B	638	641	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	262	267	first strand
Strand 2	F	296	301	parallel
Strand 3	F	338	344	parallel
Strand 4	F	237	241	parallel
Strand 5	F	362	365	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	535	540	first strand
Strand 2	F	569	574	parallel
Strand 3	F	614	620	parallel
Strand 4	F	510	514	parallel
Strand 5	F	638	641	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	262	267	first strand
Strand 2	E	296	301	parallel
Strand 3	E	338	344	parallel
Strand 4	E	237	241	parallel
Strand 5	E	362	365	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	535	540	first strand
Strand 2	E	569	574	parallel
Strand 3	E	614	620	parallel
Strand 4	E	510	514	parallel
Strand 5	E	638	641	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	262	267	first strand
Strand 2	D	296	301	parallel
Strand 3	D	338	344	parallel
Strand 4	D	237	241	parallel
Strand 5	D	362	365	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	535	538	first strand
Strand 2	D	569	573	parallel
Strand 3	D	614	620	parallel
Strand 4	D	510	514	parallel
Strand 5	D	638	641	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	262	267	first strand
Strand 2	C	296	301	parallel
Strand 3	C	338	344	parallel
Strand 4	C	237	241	parallel
Strand 5	C	362	365	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	535	540	first strand
Strand 2	C	569	574	parallel
Strand 3	C	614	620	parallel
Strand 4	C	510	514	parallel
Strand 5	C	638	641	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9P01

Analysis of interatomic Contacts of Structural Units in PDB entry:
9P01