Analysis of interatomic Contacts of Structural Units in PDB entry:
9P0X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9P0X entry

There are 22 chains in PDB entry 9P0X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
V	ALA 1	LEU 5
V	LEU 8	LEU 13
V	ARG 15	ARG 15
V	CYS 17	LYS 18
V	GLN 21	PHE 24
V	ALA 27	ARG 28
V	ILE 30	ALA 34
V	ARG 36	GLU 142
X	ALA 1	LEU 5
X	MET 8	LEU 13
X	ARG 15	ARG 15
X	CYS 17	MET 18
X	THR 21	TYR 24
X	ALA 27	ARG 28
X	VAL 30	PHE 31
X	ASP 33	ASN 38
X	PHE 40	PRO 131
S	ILE 153	PRO 406
T	THR 6	MET 210
K	THR 12	ASP 79
H	GLN 1	ASP 221
L	ASP 1	CYS 220

There are 26 helices in PDB entry 9P0X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	V	12	18	Right-handed alpha
Helix 2	AA2	V	23	32	Right-handed alpha
Helix 3	AA3	V	33	45	Right-handed alpha
Helix 4	AA4	V	86	88	Right-handed 310
Helix 5	AA5	X	13	18	Right-handed alpha
Helix 6	AA6	X	23	32	Right-handed alpha
Helix 7	AA7	X	33	45	Right-handed alpha
Helix 8	AA8	X	91	96	Right-handed alpha
Helix 9	AA9	S	191	195	Right-handed 310
Helix 10	AB1	S	200	202	Right-handed 310
Helix 11	AB2	S	265	272	Right-handed alpha
Helix 12	AB3	S	306	314	Right-handed alpha
Helix 13	AB4	S	379	382	Right-handed 310
Helix 14	AB5	S	383	392	Right-handed alpha
Helix 15	AB6	T	59	64	Right-handed alpha
Helix 16	AB7	T	101	106	Right-handed alpha
Helix 17	AB8	T	143	148	Right-handed alpha
Helix 18	AB9	T	149	151	Right-handed 310
Helix 19	AC1	K	24	28	Right-handed 310
Helix 20	AC2	K	68	77	Right-handed alpha
Helix 21	AC3	H	28	32	Right-handed 310
Helix 22	AC4	H	62	65	Right-handed 310
Helix 23	AC5	H	87	91	Right-handed 310
Helix 24	AC6	L	85	89	Right-handed 310
Helix 25	AC7	L	127	134	Right-handed alpha
Helix 26	AC8	L	188	193	Right-handed alpha

There are 29 sheets in PDB entry 9P0X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	60	64	first strand
Strand 2	V	67	71	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	76	77	first strand
Strand 2	V	83	84	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	101	103	first strand
Strand 2	V	111	113	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	118	120	first strand
Strand 2	V	127	129	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	99	101	first strand
Strand 2	X	108	110	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	157	158	first strand
Strand 2	S	298	302	anti-parallel
Strand 3	S	279	283	anti-parallel
Strand 4	S	347	351	anti-parallel
Strand 5	S	356	362	anti-parallel
Strand 6	S	375	378	anti-parallel
Strand 7	S	329	330	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	175	178	first strand
Strand 2	S	168	172	anti-parallel
Strand 3	S	204	208	anti-parallel
Strand 4	S	221	231	anti-parallel
Strand 5	S	244	248	anti-parallel
Strand 6	S	187	190	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	175	178	first strand
Strand 2	S	168	172	anti-parallel
Strand 3	S	204	208	anti-parallel
Strand 4	S	221	231	anti-parallel
Strand 5	S	400	403	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	13	17	first strand
Strand 2	T	20	24	anti-parallel
Strand 3	T	56	58	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	46	52	first strand
Strand 2	T	32	39	anti-parallel
Strand 3	T	72	79	anti-parallel
Strand 4	T	95	96	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	113	119	first strand
Strand 2	T	122	127	anti-parallel
Strand 3	T	177	178	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	131	136	first strand
Strand 2	T	139	142	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	153	157	first strand
Strand 2	T	166	170	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	186	187	first strand
Strand 2	T	208	209	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	39	45	first strand
Strand 2	K	50	56	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	6	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	68	73	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	114	118	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	34	39	anti-parallel
Strand 5	H	46	47	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	114	118	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	107	110	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	49	51	first strand
Strand 2	H	58	60	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	129	130	first strand
Strand 2	H	147	152	anti-parallel
Strand 3	H	182	184	anti-parallel
Strand 4	H	176	177	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	142	145	first strand
Strand 2	H	186	191	anti-parallel
Strand 3	H	170	172	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	158	161	first strand
Strand 2	H	200	206	anti-parallel
Strand 3	H	211	213	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	158	161	first strand
Strand 2	H	200	206	anti-parallel
Strand 3	H	216	217	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	6	first strand
Strand 2	L	19	25	anti-parallel
Strand 3	L	76	81	anti-parallel
Strand 4	L	69	71	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	13	first strand
Strand 2	L	109	112	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	30	31	first strand
Strand 2	L	36	37	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	59	60	first strand
Strand 2	L	51	55	anti-parallel
Strand 3	L	39	44	anti-parallel
Strand 4	L	91	96	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	122	124	first strand
Strand 2	L	138	141	anti-parallel
Strand 3	L	182	185	anti-parallel
Strand 4	L	165	166	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	159	160	first strand
Strand 2	L	150	156	anti-parallel
Strand 3	L	197	204	anti-parallel
Strand 4	L	211	216	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9P0X

Analysis of interatomic Contacts of Structural Units in PDB entry:
9P0X