Analysis of interatomic Contacts of Structural Units in PDB entry:
9P11

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9P11 entry

There are 6 chains in PDB entry 9P11 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	ILE 12	THR 321
D	LYS 10	THR 321
A	MET 1	ASN 1076
B	MET 1	ASN 1076
C	ILE 12	THR 321
E	LYS 10	THR 321

There are145 helices in PDB entry 9P11. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	68	76	Right-handed alpha
Helix 2	AA2	F	114	124	Right-handed alpha
Helix 3	AA3	F	125	149	Right-handed alpha
Helix 4	AA4	F	152	157	Right-handed alpha
Helix 5	AA5	F	163	178	Right-handed alpha
Helix 6	AA6	F	182	206	Right-handed alpha
Helix 7	AA7	F	213	217	Right-handed 310
Helix 8	AA8	F	220	245	Right-handed alpha
Helix 9	AA9	F	260	286	Right-handed alpha
Helix 10	AB1	F	288	303	Right-handed alpha
Helix 11	AB2	F	304	319	Right-handed alpha
Helix 12	AB3	D	13	17	Right-handed 310
Helix 13	AB4	D	51	53	Right-handed 310
Helix 14	AB5	D	68	75	Right-handed alpha
Helix 15	AB6	D	114	124	Right-handed alpha
Helix 16	AB7	D	125	150	Right-handed alpha
Helix 17	AB8	D	151	157	Right-handed alpha
Helix 18	AB9	D	162	179	Right-handed alpha
Helix 19	AC1	D	182	205	Right-handed alpha
Helix 20	AC2	D	220	245	Right-handed alpha
Helix 21	AC3	D	260	272	Right-handed alpha
Helix 22	AC4	D	274	285	Right-handed alpha
Helix 23	AC5	D	288	304	Right-handed alpha
Helix 24	AC6	D	304	321	Right-handed alpha
Helix 25	AC7	A	10	22	Right-handed alpha
Helix 26	AC8	A	38	52	Right-handed alpha
Helix 27	AC9	A	79	82	Right-handed 310
Helix 28	AD1	A	108	122	Right-handed alpha
Helix 29	AD2	A	124	128	Right-handed 310
Helix 30	AD3	A	129	138	Right-handed alpha
Helix 31	AD4	A	148	162	Right-handed alpha
Helix 32	AD5	A	168	176	Right-handed alpha
Helix 33	AD6	A	181	186	Right-handed 310
Helix 34	AD7	A	209	219	Right-handed alpha
Helix 35	AD8	A	242	246	Right-handed 310
Helix 36	AD9	A	252	259	Right-handed alpha
Helix 37	AE1	A	270	287	Right-handed alpha
Helix 38	AE2	A	289	292	Right-handed 310
Helix 39	AE3	A	293	299	Right-handed alpha
Helix 40	AE4	A	300	319	Right-handed alpha
Helix 41	AE5	A	348	367	Right-handed alpha
Helix 42	AE6	A	369	374	Right-handed alpha
Helix 43	AE7	A	393	413	Right-handed alpha
Helix 44	AE8	A	425	437	Right-handed alpha
Helix 45	AE9	A	456	468	Right-handed alpha
Helix 46	AF1	A	489	497	Right-handed alpha
Helix 47	AF2	A	523	528	Right-handed alpha
Helix 48	AF3	A	531	539	Right-handed alpha
Helix 49	AF4	A	546	550	Right-handed alpha
Helix 50	AF5	A	551	553	Right-handed 310
Helix 51	AF6	A	561	570	Right-handed alpha
Helix 52	AF7	A	578	581	Right-handed 310
Helix 53	AF8	A	582	584	Right-handed 310
Helix 54	AF9	A	585	599	Right-handed alpha
Helix 55	AG1	A	611	631	Right-handed alpha
Helix 56	AG2	A	659	680	Right-handed alpha
Helix 57	AG3	A	699	721	Right-handed alpha
Helix 58	AG4	A	739	752	Right-handed alpha
Helix 59	AG5	A	771	786	Right-handed alpha
Helix 60	AG6	A	792	797	Right-handed alpha
Helix 61	AG7	A	799	809	Right-handed alpha
Helix 62	AG8	A	822	825	Right-handed 310
Helix 63	AG9	A	841	850	Right-handed alpha
Helix 64	AH1	A	871	876	Right-handed alpha
Helix 65	AH2	A	898	903	Right-handed alpha
Helix 66	AH3	A	904	908	Right-handed 310
Helix 67	AH4	A	913	918	Right-handed alpha
Helix 68	AH5	A	928	941	Right-handed alpha
Helix 69	AH6	A	954	959	Right-handed alpha
Helix 70	AH7	A	960	964	Right-handed 310
Helix 71	AH8	A	965	971	Right-handed alpha
Helix 72	AH9	A	1029	1042	Right-handed alpha
Helix 73	AI1	A	1044	1053	Right-handed alpha
Helix 74	AI2	B	11	22	Right-handed alpha
Helix 75	AI3	B	38	52	Right-handed alpha
Helix 76	AI4	B	79	82	Right-handed 310
Helix 77	AI5	B	108	122	Right-handed alpha
Helix 78	AI6	B	124	128	Right-handed 310
Helix 79	AI7	B	129	138	Right-handed alpha
Helix 80	AI8	B	148	162	Right-handed alpha
Helix 81	AI9	B	168	176	Right-handed alpha
Helix 82	AJ1	B	181	186	Right-handed 310
Helix 83	AJ2	B	209	219	Right-handed alpha
Helix 84	AJ3	B	242	246	Right-handed 310
Helix 85	AJ4	B	252	259	Right-handed alpha
Helix 86	AJ5	B	270	287	Right-handed alpha
Helix 87	AJ6	B	293	299	Right-handed alpha
Helix 88	AJ7	B	300	319	Right-handed alpha
Helix 89	AJ8	B	348	367	Right-handed alpha
Helix 90	AJ9	B	369	374	Right-handed alpha
Helix 91	AK1	B	393	413	Right-handed alpha
Helix 92	AK2	B	425	437	Right-handed alpha
Helix 93	AK3	B	456	468	Right-handed alpha
Helix 94	AK4	B	489	497	Right-handed alpha
Helix 95	AK5	B	523	528	Right-handed alpha
Helix 96	AK6	B	531	539	Right-handed alpha
Helix 97	AK7	B	546	550	Right-handed alpha
Helix 98	AK8	B	551	553	Right-handed 310
Helix 99	AK9	B	561	570	Right-handed alpha
Helix 100	AL1	B	578	581	Right-handed 310
Helix 101	AL2	B	582	584	Right-handed 310
Helix 102	AL3	B	585	599	Right-handed alpha
Helix 103	AL4	B	611	631	Right-handed alpha
Helix 104	AL5	B	659	680	Right-handed alpha
Helix 105	AL6	B	699	721	Right-handed alpha
Helix 106	AL7	B	739	752	Right-handed alpha
Helix 107	AL8	B	771	786	Right-handed alpha
Helix 108	AL9	B	792	797	Right-handed alpha
Helix 109	AM1	B	799	809	Right-handed alpha
Helix 110	AM2	B	822	825	Right-handed 310
Helix 111	AM3	B	841	850	Right-handed alpha
Helix 112	AM4	B	871	876	Right-handed alpha
Helix 113	AM5	B	898	903	Right-handed alpha
Helix 114	AM6	B	904	908	Right-handed 310
Helix 115	AM7	B	913	918	Right-handed alpha
Helix 116	AM8	B	928	941	Right-handed alpha
Helix 117	AM9	B	954	959	Right-handed alpha
Helix 118	AN1	B	960	964	Right-handed 310
Helix 119	AN2	B	965	971	Right-handed alpha
Helix 120	AN3	B	1029	1042	Right-handed alpha
Helix 121	AN4	B	1044	1053	Right-handed alpha
Helix 122	AN5	C	68	76	Right-handed alpha
Helix 123	AN6	C	114	124	Right-handed alpha
Helix 124	AN7	C	125	149	Right-handed alpha
Helix 125	AN8	C	152	157	Right-handed alpha
Helix 126	AN9	C	163	178	Right-handed alpha
Helix 127	AO1	C	182	206	Right-handed alpha
Helix 128	AO2	C	213	217	Right-handed 310
Helix 129	AO3	C	220	245	Right-handed alpha
Helix 130	AO4	C	260	286	Right-handed alpha
Helix 131	AO5	C	288	303	Right-handed alpha
Helix 132	AO6	C	304	319	Right-handed alpha
Helix 133	AO7	E	13	17	Right-handed 310
Helix 134	AO8	E	51	53	Right-handed 310
Helix 135	AO9	E	68	75	Right-handed alpha
Helix 136	AP1	E	114	124	Right-handed alpha
Helix 137	AP2	E	125	150	Right-handed alpha
Helix 138	AP3	E	151	156	Right-handed alpha
Helix 139	AP4	E	162	179	Right-handed alpha
Helix 140	AP5	E	182	205	Right-handed alpha
Helix 141	AP6	E	220	245	Right-handed alpha
Helix 142	AP7	E	260	272	Right-handed alpha
Helix 143	AP8	E	274	285	Right-handed alpha
Helix 144	AP9	E	288	304	Right-handed alpha
Helix 145	AQ1	E	304	321	Right-handed alpha

There are 20 sheets in PDB entry 9P11. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	21	23	first strand
Strand 2	F	58	60	parallel
Strand 3	F	81	84	parallel
Strand 4	F	91	95	anti-parallel
Strand 5	E	103	106	anti-parallel
Strand 6	E	80	83	anti-parallel
Strand 7	E	55	60	parallel
Strand 8	E	19	23	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	34	38	first strand
Strand 2	F	26	31	anti-parallel
Strand 3	F	64	67	parallel
Strand 4	E	65	67	anti-parallel
Strand 5	E	27	31	parallel
Strand 6	E	34	40	anti-parallel
Strand 7	E	45	49	anti-parallel
Strand 8	B	91	93	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	19	23	first strand
Strand 2	D	55	60	parallel
Strand 3	D	80	82	parallel
Strand 4	D	103	106	anti-parallel
Strand 5	C	91	95	anti-parallel
Strand 6	C	81	84	anti-parallel
Strand 7	C	58	60	parallel
Strand 8	C	21	23	parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	93	first strand
Strand 2	D	45	49	anti-parallel
Strand 3	D	34	40	anti-parallel
Strand 4	D	27	31	anti-parallel
Strand 5	D	65	67	parallel
Strand 6	C	65	67	anti-parallel
Strand 7	C	27	31	parallel
Strand 8	C	34	38	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	92	94	first strand
Strand 2	D	97	99	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	26	27	first strand
Strand 2	A	32	36	anti-parallel
Strand 3	A	2	7	anti-parallel
Strand 4	A	58	64	anti-parallel
Strand 5	A	70	77	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	337	338	first strand
Strand 2	A	345	347	anti-parallel

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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	511	513	first strand
Strand 2	A	474	478	anti-parallel
Strand 3	A	541	545	parallel
Strand 4	A	446	450	parallel
Strand 5	A	572	576	parallel
Strand 6	A	603	606	parallel
Strand 7	A	415	418	parallel
Strand 8	A	642	647	parallel
Strand 9	A	652	657	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	687	690	first strand
Strand 2	A	865	868	parallel
Strand 3	A	834	837	parallel
Strand 4	A	728	736	parallel
Strand 5	A	723	725	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	687	690	first strand
Strand 2	A	865	868	parallel
Strand 3	A	834	837	parallel
Strand 4	A	728	736	parallel
Strand 5	A	813	820	parallel
Strand 6	A	760	766	parallel
Strand 7	A	1022	1024	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1004	1006	first strand
Strand 2	A	994	999	anti-parallel
Strand 3	A	979	986	anti-parallel
Strand 4	A	1055	1058	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1011	1013	first strand
Strand 2	A	1064	1067	parallel
Strand 3	A	1071	1074	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	26	27	first strand
Strand 2	B	32	36	anti-parallel
Strand 3	B	2	7	anti-parallel
Strand 4	B	58	64	anti-parallel
Strand 5	B	70	77	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	337	338	first strand
Strand 2	B	345	347	anti-parallel

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There are 9 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	511	513	first strand
Strand 2	B	474	478	anti-parallel
Strand 3	B	541	545	parallel
Strand 4	B	446	450	parallel
Strand 5	B	572	576	parallel
Strand 6	B	603	606	parallel
Strand 7	B	415	418	parallel
Strand 8	B	642	647	parallel
Strand 9	B	652	657	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	687	690	first strand
Strand 2	B	865	868	parallel
Strand 3	B	834	837	parallel
Strand 4	B	728	736	parallel
Strand 5	B	723	725	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	687	690	first strand
Strand 2	B	865	868	parallel
Strand 3	B	834	837	parallel
Strand 4	B	728	736	parallel
Strand 5	B	813	820	parallel
Strand 6	B	760	766	parallel
Strand 7	B	1022	1024	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1004	1006	first strand
Strand 2	B	994	999	anti-parallel
Strand 3	B	979	986	anti-parallel
Strand 4	B	1055	1058	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1011	1013	first strand
Strand 2	B	1064	1067	parallel
Strand 3	B	1071	1074	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	92	94	first strand
Strand 2	E	97	99	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9P11

Analysis of interatomic Contacts of Structural Units in PDB entry:
9P11