Analysis of interatomic Contacts of Structural Units in PDB entry:
9P24


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9P24 entry

There is 1 chain in PDB entry 9P24 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 17ALA 1778
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 9P24. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 37Right-handed alpha
Helix 2
AA2
A
85 90Right-handed 310
Helix 3
AA3
A
118 130Right-handed alpha
Helix 4
AA4
A
131 147Right-handed alpha
Helix 5
AA5
A
156 179Right-handed alpha
Helix 6
AA6
A
187 191Right-handed 310
Helix 7
AA7
A
192 210Right-handed alpha
Helix 8
AA8
A
223 228Right-handed alpha
Helix 9
AA9
A
235 250Right-handed alpha
Helix 10
AB1
A
253 270Right-handed alpha
Helix 11
AB2
A
303 310Right-handed alpha
Helix 12
AB3
A
348 352Right-handed 310
Helix 13
AB4
A
357 371Right-handed alpha
Helix 14
AB5
A
373 385Right-handed alpha
Helix 15
AB6
A
389 401Right-handed alpha
Helix 16
AB7
A
403 439Right-handed alpha
Helix 17
AB8
A
703 715Right-handed alpha
Helix 18
AB9
A
719 735Right-handed alpha
Helix 19
AC1
A
742 776Right-handed alpha
Helix 20
AC2
A
779 794Right-handed alpha
Helix 21
AC3
A
804 821Right-handed 310
Helix 22
AC4
A
822 835Right-handed alpha
Helix 23
AC5
A
842 861Right-handed alpha
Helix 24
AC6
A
862 872Right-handed 310
Helix 25
AC7
A
883 897Right-handed alpha
Helix 26
AC8
A
900 911Right-handed alpha
Helix 27
AC9
A
912 943Right-handed alpha
Helix 28
AD1
A
958 971Right-handed alpha
Helix 29
AD2
A
1189 1203Right-handed alpha
Helix 30
AD3
A
1204 1221Right-handed alpha
Helix 31
AD4
A
1222 1225Right-handed 310
Helix 32
AD5
A
1235 1262Right-handed alpha
Helix 33
AD6
A
1262 1267Right-handed alpha
Helix 34
AD7
A
1269 1291Right-handed alpha
Helix 35
AD8
A
1296 1304Right-handed alpha
Helix 36
AD9
A
1305 1315Right-handed 310
Helix 37
AE1
A
1317 1329Right-handed alpha
Helix 38
AE2
A
1331 1356Right-handed alpha
Helix 39
AE3
A
1380 1387Right-handed alpha
Helix 40
AE4
A
1404 1417Right-handed alpha
Helix 41
AE5
A
1420 1430Right-handed alpha
Helix 42
AE6
A
1443 1445Right-handed 310
Helix 43
AE7
A
1446 1457Right-handed alpha
Helix 44
AE8
A
1459 1480Right-handed alpha
Helix 45
AE9
A
1488 1503Right-handed alpha
Helix 46
AF1
A
1518 1526Right-handed alpha
Helix 47
AF2
A
1527 1546Right-handed alpha
Helix 48
AF3
A
1553 1582Right-handed alpha
Helix 49
AF4
A
1591 1616Right-handed alpha
Helix 50
AF5
A
1618 1627Right-handed alpha
Helix 51
AF6
A
1628 1631Right-handed 310
Helix 52
AF7
A
1633 1640Right-handed 310
Helix 53
AF8
A
1641 1654Right-handed alpha
Helix 54
AF9
A
1654 1677Right-handed alpha
Helix 55
AG1
A
1696 1708Right-handed alpha
Helix 56
AG2
A
1712 1718Right-handed alpha
Helix 57
AG3
A
1744 1778Right-handed alpha
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There are 4 sheets in PDB entry 9P24. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 93first strand
Strand 2
A
105 106anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 282first strand
Strand 2
A
339 343anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
295 296first strand
Strand 2
A
299 300anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1361 1364first strand
Strand 2
A
1394 1397anti-parallel
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