Analysis of interatomic Contacts of Structural Units in PDB entry:
9P2F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9P2F entry

There is 1 chain in PDB entry 9P2F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 26GLU 432
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 9P2F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
62 70Right-handed alpha
Helix 2
AA2
A
80 89Right-handed alpha
Helix 3
AA3
A
102 106Right-handed 310
Helix 4
AA4
A
111 130Right-handed alpha
Helix 5
AA5
A
149 171Right-handed alpha
Helix 6
AA6
A
186 195Right-handed alpha
Helix 7
AA7
A
208 210Right-handed 310
Helix 8
AA8
A
211 219Right-handed alpha
Helix 9
AA9
A
250 266Right-handed alpha
Helix 10
AB1
A
302 313Right-handed alpha
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There are 4 sheets in PDB entry 9P2F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 39first strand
Strand 2
A
42 47anti-parallel
Strand 3
A
50 52anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 58first strand
Strand 2
A
73 76parallel
Strand 3
A
93 98parallel
Strand 4
A
135 140parallel
Strand 5
A
176 181parallel
Strand 6
A
200 204parallel
Strand 7
A
225 229parallel
Strand 8
A
272 277parallel
Strand 9
A
54 58parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 332first strand
Strand 2
A
348 356anti-parallel
Strand 3
A
398 401anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
342 343first strand
Strand 2
A
422 431parallel
Strand 3
A
407 416anti-parallel
Strand 4
A
364 371anti-parallel
Strand 5
A
391 394anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il