Analysis of interatomic Contacts of Structural Units in PDB entry:
9P3B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9P3B entry

There are 2 chains in PDB entry 9P3B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 20PRO 417
B
 ASN 20PRO 417
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 9P3B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
48 53Right-handed 310
Helix 2
AA2
A
54 59Right-handed alpha
Helix 3
AA3
A
64 88Right-handed alpha
Helix 4
AA4
A
101 105Right-handed 310
Helix 5
AA5
A
106 121Right-handed alpha
Helix 6
AA6
A
122 126Right-handed 310
Helix 7
AA7
A
134 138Right-handed 310
Helix 8
AA8
A
139 150Right-handed alpha
Helix 9
AA9
A
162 169Right-handed alpha
Helix 10
AB1
A
174 188Right-handed alpha
Helix 11
AB2
A
205 218Right-handed alpha
Helix 12
AB3
A
246 267Right-handed alpha
Helix 13
AB4
A
281 289Right-handed alpha
Helix 14
AB5
A
316 323Right-handed alpha
Helix 15
AB6
A
335 347Right-handed alpha
Helix 16
AB7
A
355 363Right-handed alpha
Helix 17
AB8
A
365 371Right-handed alpha
Helix 18
AB9
A
375 385Right-handed alpha
Helix 19
AC1
A
400 416Right-handed alpha
Helix 20
AC2
B
48 53Right-handed 310
Helix 21
AC3
B
54 59Right-handed alpha
Helix 22
AC4
B
64 88Right-handed alpha
Helix 23
AC5
B
101 105Right-handed 310
Helix 24
AC6
B
106 121Right-handed alpha
Helix 25
AC7
B
122 126Right-handed 310
Helix 26
AC8
B
134 138Right-handed 310
Helix 27
AC9
B
139 150Right-handed alpha
Helix 28
AD1
B
162 169Right-handed alpha
Helix 29
AD2
B
174 188Right-handed alpha
Helix 30
AD3
B
205 218Right-handed alpha
Helix 31
AD4
B
242 267Right-handed alpha
Helix 32
AD5
B
281 289Right-handed alpha
Helix 33
AD6
B
316 323Right-handed alpha
Helix 34
AD7
B
335 347Right-handed alpha
Helix 35
AD8
B
355 363Right-handed alpha
Helix 36
AD9
B
365 371Right-handed alpha
Helix 37
AE1
B
375 385Right-handed alpha
Helix 38
AE2
B
400 416Right-handed alpha
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There are 6 sheets in PDB entry 9P3B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 273first strand
Strand 2
A
276 278anti-parallel
Strand 3
A
223 228anti-parallel
Strand 4
A
193 199parallel
Strand 5
A
153 159parallel
Strand 6
A
128 133parallel
Strand 7
A
91 99parallel
Strand 8
A
30 37parallel
Strand 9
A
293 297parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 305first strand
Strand 2
A
308 311anti-parallel
Strand 3
A
329 332anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 354first strand
Strand 2
A
393 395anti-parallel
Strand 3
A
388 389anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
271 273first strand
Strand 2
B
276 278anti-parallel
Strand 3
B
223 228anti-parallel
Strand 4
B
193 199parallel
Strand 5
B
153 159parallel
Strand 6
B
128 133parallel
Strand 7
B
91 99parallel
Strand 8
B
30 37parallel
Strand 9
B
293 297parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
302 305first strand
Strand 2
B
308 311anti-parallel
Strand 3
B
329 332anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
353 354first strand
Strand 2
B
393 396anti-parallel
Strand 3
B
387 389anti-parallel
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