Analysis of interatomic Contacts of Structural Units in PDB entry:
9P3G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9P3G entry

There are 2 chains in PDB entry 9P3G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 8	ALA 406
B	VAL 8	ALA 406

There are 2 helices in PDB entry 9P3G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	183	187	Right-handed 310
Helix 2	AA2	B	183	187	Right-handed 310

There are 16 sheets in PDB entry 9P3G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	32	first strand
Strand 2	A	337	340	parallel
Strand 3	A	343	350	anti-parallel
Strand 4	A	354	361	anti-parallel
Strand 5	A	367	372	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	44	first strand
Strand 2	A	399	405	anti-parallel
Strand 3	A	391	395	anti-parallel
Strand 4	A	380	385	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	60	64	anti-parallel
Strand 3	A	73	77	anti-parallel
Strand 4	A	84	88	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	100	101	first strand
Strand 2	A	107	111	anti-parallel
Strand 3	A	114	118	anti-parallel
Strand 4	A	126	129	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	138	139	first strand
Strand 2	A	144	148	anti-parallel
Strand 3	A	153	158	anti-parallel
Strand 4	A	164	170	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	201	203	first strand
Strand 2	A	208	213	anti-parallel
Strand 3	A	222	229	anti-parallel
Strand 4	A	233	240	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	247	253	first strand
Strand 2	A	259	264	anti-parallel
Strand 3	A	268	273	anti-parallel
Strand 4	A	279	284	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	294	295	first strand
Strand 2	A	300	302	anti-parallel
Strand 3	A	311	316	anti-parallel
Strand 4	A	321	327	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	16	first strand
Strand 2	B	54	56	anti-parallel
Strand 3	B	60	64	anti-parallel
Strand 4	B	73	77	anti-parallel
Strand 5	B	84	88	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	32	first strand
Strand 2	B	337	340	parallel
Strand 3	B	343	350	anti-parallel
Strand 4	B	354	361	anti-parallel
Strand 5	B	367	372	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	37	44	first strand
Strand 2	B	399	405	anti-parallel
Strand 3	B	391	395	anti-parallel
Strand 4	B	380	385	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	101	first strand
Strand 2	B	107	111	anti-parallel
Strand 3	B	114	118	anti-parallel
Strand 4	B	126	129	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	138	139	first strand
Strand 2	B	144	148	anti-parallel
Strand 3	B	153	158	anti-parallel
Strand 4	B	164	170	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	201	203	first strand
Strand 2	B	208	213	anti-parallel
Strand 3	B	222	227	anti-parallel
Strand 4	B	235	240	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	247	253	first strand
Strand 2	B	259	264	anti-parallel
Strand 3	B	268	273	anti-parallel
Strand 4	B	279	284	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	294	295	first strand
Strand 2	B	300	302	anti-parallel
Strand 3	B	311	316	anti-parallel
Strand 4	B	321	327	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9P3G

Analysis of interatomic Contacts of Structural Units in PDB entry:
9P3G