Analysis of interatomic Contacts of Structural Units in PDB entry:
9P3Q

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9P3Q entry

There are 4 chains in PDB entry 9P3Q (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 16	MET 1092
B	ARG 16	MET 1092
C	ARG 16	MET 1092
D	ARG 16	MET 1092

There are196 helices in PDB entry 9P3Q. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	40	50	Right-handed alpha
Helix 2	AA2	A	73	91	Right-handed alpha
Helix 3	AA3	A	102	119	Right-handed alpha
Helix 4	AA4	A	135	137	Right-handed 310
Helix 5	AA5	A	139	145	Right-handed alpha
Helix 6	AA6	A	185	201	Right-handed alpha
Helix 7	AA7	A	223	225	Right-handed 310
Helix 8	AA8	A	226	236	Right-handed alpha
Helix 9	AA9	A	248	260	Right-handed alpha
Helix 10	AB1	A	263	275	Right-handed alpha
Helix 11	AB2	A	280	298	Right-handed alpha
Helix 12	AB3	A	311	328	Right-handed alpha
Helix 13	AB4	A	330	333	Right-handed 310
Helix 14	AB5	A	334	345	Right-handed alpha
Helix 15	AB6	A	346	353	Right-handed alpha
Helix 16	AB7	A	363	365	Right-handed 310
Helix 17	AB8	A	366	376	Right-handed alpha
Helix 18	AB9	A	378	388	Right-handed alpha
Helix 19	AC1	A	391	396	Right-handed alpha
Helix 20	AC2	A	397	407	Right-handed alpha
Helix 21	AC3	A	412	429	Right-handed alpha
Helix 22	AC4	A	450	462	Right-handed alpha
Helix 23	AC5	A	499	510	Right-handed alpha
Helix 24	AC6	A	513	523	Right-handed alpha
Helix 25	AC7	A	526	545	Right-handed alpha
Helix 26	AC8	A	547	555	Right-handed alpha
Helix 27	AC9	A	558	574	Right-handed alpha
Helix 28	AD1	A	576	584	Right-handed alpha
Helix 29	AD2	A	593	601	Right-handed alpha
Helix 30	AD3	A	603	608	Right-handed alpha
Helix 31	AD4	A	609	622	Right-handed alpha
Helix 32	AD5	A	629	639	Right-handed alpha
Helix 33	AD6	A	640	644	Right-handed 310
Helix 34	AD7	A	699	714	Right-handed alpha
Helix 35	AD8	A	715	740	Right-handed alpha
Helix 36	AD9	A	751	774	Right-handed alpha
Helix 37	AE1	A	780	791	Right-handed alpha
Helix 38	AE2	A	791	813	Right-handed alpha
Helix 39	AE3	A	816	839	Right-handed alpha
Helix 40	AE4	A	840	842	Right-handed 310
Helix 41	AE5	A	845	882	Right-handed alpha
Helix 42	AE6	A	887	903	Right-handed alpha
Helix 43	AE7	A	913	917	Right-handed 310
Helix 44	AE8	A	925	932	Right-handed alpha
Helix 45	AE9	A	942	959	Right-handed alpha
Helix 46	AF1	A	959	997	Right-handed alpha
Helix 47	AF2	A	1005	1020	Right-handed alpha
Helix 48	AF3	A	1034	1062	Right-handed alpha
Helix 49	AF4	A	1063	1092	Right-handed alpha
Helix 50	AF5	B	40	50	Right-handed alpha
Helix 51	AF6	B	73	91	Right-handed alpha
Helix 52	AF7	B	102	119	Right-handed alpha
Helix 53	AF8	B	135	137	Right-handed 310
Helix 54	AF9	B	139	145	Right-handed alpha
Helix 55	AG1	B	185	201	Right-handed alpha
Helix 56	AG2	B	223	225	Right-handed 310
Helix 57	AG3	B	226	236	Right-handed alpha
Helix 58	AG4	B	248	260	Right-handed alpha
Helix 59	AG5	B	263	275	Right-handed alpha
Helix 60	AG6	B	280	298	Right-handed alpha
Helix 61	AG7	B	311	328	Right-handed alpha
Helix 62	AG8	B	330	333	Right-handed 310
Helix 63	AG9	B	334	345	Right-handed alpha
Helix 64	AH1	B	346	353	Right-handed alpha
Helix 65	AH2	B	363	365	Right-handed 310
Helix 66	AH3	B	366	376	Right-handed alpha
Helix 67	AH4	B	378	388	Right-handed alpha
Helix 68	AH5	B	391	396	Right-handed alpha
Helix 69	AH6	B	397	407	Right-handed alpha
Helix 70	AH7	B	412	429	Right-handed alpha
Helix 71	AH8	B	450	462	Right-handed alpha
Helix 72	AH9	B	499	510	Right-handed alpha
Helix 73	AI1	B	513	523	Right-handed alpha
Helix 74	AI2	B	526	545	Right-handed alpha
Helix 75	AI3	B	547	555	Right-handed alpha
Helix 76	AI4	B	558	574	Right-handed alpha
Helix 77	AI5	B	576	584	Right-handed alpha
Helix 78	AI6	B	593	601	Right-handed alpha
Helix 79	AI7	B	603	608	Right-handed alpha
Helix 80	AI8	B	609	622	Right-handed alpha
Helix 81	AI9	B	629	639	Right-handed alpha
Helix 82	AJ1	B	640	644	Right-handed 310
Helix 83	AJ2	B	699	714	Right-handed alpha
Helix 84	AJ3	B	715	740	Right-handed alpha
Helix 85	AJ4	B	751	774	Right-handed alpha
Helix 86	AJ5	B	780	791	Right-handed alpha
Helix 87	AJ6	B	791	813	Right-handed alpha
Helix 88	AJ7	B	816	839	Right-handed alpha
Helix 89	AJ8	B	840	842	Right-handed 310
Helix 90	AJ9	B	845	882	Right-handed alpha
Helix 91	AK1	B	887	903	Right-handed alpha
Helix 92	AK2	B	913	917	Right-handed 310
Helix 93	AK3	B	925	932	Right-handed alpha
Helix 94	AK4	B	942	959	Right-handed alpha
Helix 95	AK5	B	959	997	Right-handed alpha
Helix 96	AK6	B	1005	1020	Right-handed alpha
Helix 97	AK7	B	1034	1062	Right-handed alpha
Helix 98	AK8	B	1063	1092	Right-handed alpha
Helix 99	AK9	C	40	50	Right-handed alpha
Helix 100	AL1	C	73	91	Right-handed alpha
Helix 101	AL2	C	102	119	Right-handed alpha
Helix 102	AL3	C	135	137	Right-handed 310
Helix 103	AL4	C	139	145	Right-handed alpha
Helix 104	AL5	C	185	201	Right-handed alpha
Helix 105	AL6	C	223	225	Right-handed 310
Helix 106	AL7	C	226	236	Right-handed alpha
Helix 107	AL8	C	248	260	Right-handed alpha
Helix 108	AL9	C	263	275	Right-handed alpha
Helix 109	AM1	C	280	298	Right-handed alpha
Helix 110	AM2	C	311	328	Right-handed alpha
Helix 111	AM3	C	330	333	Right-handed 310
Helix 112	AM4	C	334	345	Right-handed alpha
Helix 113	AM5	C	346	353	Right-handed alpha
Helix 114	AM6	C	363	365	Right-handed 310
Helix 115	AM7	C	366	376	Right-handed alpha
Helix 116	AM8	C	378	388	Right-handed alpha
Helix 117	AM9	C	391	396	Right-handed alpha
Helix 118	AN1	C	397	407	Right-handed alpha
Helix 119	AN2	C	412	429	Right-handed alpha
Helix 120	AN3	C	450	462	Right-handed alpha
Helix 121	AN4	C	499	510	Right-handed alpha
Helix 122	AN5	C	513	523	Right-handed alpha
Helix 123	AN6	C	526	545	Right-handed alpha
Helix 124	AN7	C	547	555	Right-handed alpha
Helix 125	AN8	C	558	574	Right-handed alpha
Helix 126	AN9	C	576	584	Right-handed alpha
Helix 127	AO1	C	593	601	Right-handed alpha
Helix 128	AO2	C	603	608	Right-handed alpha
Helix 129	AO3	C	609	622	Right-handed alpha
Helix 130	AO4	C	629	639	Right-handed alpha
Helix 131	AO5	C	640	644	Right-handed 310
Helix 132	AO6	C	699	714	Right-handed alpha
Helix 133	AO7	C	715	740	Right-handed alpha
Helix 134	AO8	C	751	774	Right-handed alpha
Helix 135	AO9	C	780	791	Right-handed alpha
Helix 136	AP1	C	791	813	Right-handed alpha
Helix 137	AP2	C	816	839	Right-handed alpha
Helix 138	AP3	C	840	842	Right-handed 310
Helix 139	AP4	C	845	882	Right-handed alpha
Helix 140	AP5	C	887	903	Right-handed alpha
Helix 141	AP6	C	913	917	Right-handed 310
Helix 142	AP7	C	925	932	Right-handed alpha
Helix 143	AP8	C	942	959	Right-handed alpha
Helix 144	AP9	C	959	997	Right-handed alpha
Helix 145	AQ1	C	1005	1020	Right-handed alpha
Helix 146	AQ2	C	1034	1062	Right-handed alpha
Helix 147	AQ3	C	1063	1092	Right-handed alpha
Helix 148	AQ4	D	40	50	Right-handed alpha
Helix 149	AQ5	D	73	91	Right-handed alpha
Helix 150	AQ6	D	102	119	Right-handed alpha
Helix 151	AQ7	D	135	137	Right-handed 310
Helix 152	AQ8	D	139	145	Right-handed alpha
Helix 153	AQ9	D	185	201	Right-handed alpha
Helix 154	AR1	D	223	225	Right-handed 310
Helix 155	AR2	D	226	236	Right-handed alpha
Helix 156	AR3	D	248	260	Right-handed alpha
Helix 157	AR4	D	263	275	Right-handed alpha
Helix 158	AR5	D	280	298	Right-handed alpha
Helix 159	AR6	D	311	328	Right-handed alpha
Helix 160	AR7	D	330	333	Right-handed 310
Helix 161	AR8	D	334	345	Right-handed alpha
Helix 162	AR9	D	346	353	Right-handed alpha
Helix 163	AS1	D	363	365	Right-handed 310
Helix 164	AS2	D	366	376	Right-handed alpha
Helix 165	AS3	D	378	388	Right-handed alpha
Helix 166	AS4	D	391	396	Right-handed alpha
Helix 167	AS5	D	397	407	Right-handed alpha
Helix 168	AS6	D	412	429	Right-handed alpha
Helix 169	AS7	D	450	462	Right-handed alpha
Helix 170	AS8	D	499	510	Right-handed alpha
Helix 171	AS9	D	513	523	Right-handed alpha
Helix 172	AT1	D	526	545	Right-handed alpha
Helix 173	AT2	D	547	555	Right-handed alpha
Helix 174	AT3	D	558	574	Right-handed alpha
Helix 175	AT4	D	576	584	Right-handed alpha
Helix 176	AT5	D	593	601	Right-handed alpha
Helix 177	AT6	D	603	608	Right-handed alpha
Helix 178	AT7	D	609	622	Right-handed alpha
Helix 179	AT8	D	629	639	Right-handed alpha
Helix 180	AT9	D	640	644	Right-handed 310
Helix 181	AU1	D	699	714	Right-handed alpha
Helix 182	AU2	D	715	740	Right-handed alpha
Helix 183	AU3	D	751	774	Right-handed alpha
Helix 184	AU4	D	780	791	Right-handed alpha
Helix 185	AU5	D	791	813	Right-handed alpha
Helix 186	AU6	D	816	839	Right-handed alpha
Helix 187	AU7	D	840	842	Right-handed 310
Helix 188	AU8	D	845	882	Right-handed alpha
Helix 189	AU9	D	887	903	Right-handed alpha
Helix 190	AV1	D	913	917	Right-handed 310
Helix 191	AV2	D	925	932	Right-handed alpha
Helix 192	AV3	D	942	959	Right-handed alpha
Helix 193	AV4	D	959	997	Right-handed alpha
Helix 194	AV5	D	1005	1020	Right-handed alpha
Helix 195	AV6	D	1034	1062	Right-handed alpha
Helix 196	AV7	D	1063	1092	Right-handed alpha

There are 12 sheets in PDB entry 9P3Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	18	22	first strand
Strand 2	A	28	35	anti-parallel
Strand 3	A	173	177	parallel
Strand 4	A	129	133	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	127	first strand
Strand 2	A	93	96	parallel
Strand 3	A	59	65	parallel
Strand 4	A	215	220	parallel
Strand 5	A	240	243	parallel
Strand 6	A	301	304	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	202	204	first strand
Strand 2	A	210	212	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	18	22	first strand
Strand 2	B	28	35	anti-parallel
Strand 3	B	173	177	parallel
Strand 4	B	129	133	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	127	first strand
Strand 2	B	93	96	parallel
Strand 3	B	59	65	parallel
Strand 4	B	215	220	parallel
Strand 5	B	240	243	parallel
Strand 6	B	301	304	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	202	204	first strand
Strand 2	B	210	212	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	18	22	first strand
Strand 2	C	28	35	anti-parallel
Strand 3	C	173	177	parallel
Strand 4	C	129	133	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	127	first strand
Strand 2	C	93	96	parallel
Strand 3	C	59	65	parallel
Strand 4	C	215	220	parallel
Strand 5	C	240	243	parallel
Strand 6	C	301	304	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	202	204	first strand
Strand 2	C	210	212	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	18	22	first strand
Strand 2	D	28	35	anti-parallel
Strand 3	D	173	177	parallel
Strand 4	D	129	133	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	126	127	first strand
Strand 2	D	93	96	parallel
Strand 3	D	59	65	parallel
Strand 4	D	215	220	parallel
Strand 5	D	240	243	parallel
Strand 6	D	301	304	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	202	204	first strand
Strand 2	D	210	212	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9P3Q

Analysis of interatomic Contacts of Structural Units in PDB entry:
9P3Q