Analysis of interatomic Contacts of Structural Units in PDB entry:
9P3R

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9P3R entry

There are 4 chains in PDB entry 9P3R (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 16	MET 1092
B	ARG 16	MET 1092
C	ARG 16	MET 1092
D	ARG 16	MET 1092

There are204 helices in PDB entry 9P3R. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	40	50	Right-handed alpha
Helix 2	AA2	A	73	91	Right-handed alpha
Helix 3	AA3	A	102	119	Right-handed alpha
Helix 4	AA4	A	135	137	Right-handed 310
Helix 5	AA5	A	139	145	Right-handed alpha
Helix 6	AA6	A	185	201	Right-handed alpha
Helix 7	AA7	A	223	225	Right-handed 310
Helix 8	AA8	A	226	236	Right-handed alpha
Helix 9	AA9	A	248	260	Right-handed alpha
Helix 10	AB1	A	263	275	Right-handed alpha
Helix 11	AB2	A	280	298	Right-handed alpha
Helix 12	AB3	A	311	328	Right-handed alpha
Helix 13	AB4	A	330	333	Right-handed 310
Helix 14	AB5	A	334	345	Right-handed alpha
Helix 15	AB6	A	346	353	Right-handed alpha
Helix 16	AB7	A	363	365	Right-handed 310
Helix 17	AB8	A	366	376	Right-handed alpha
Helix 18	AB9	A	378	388	Right-handed alpha
Helix 19	AC1	A	391	396	Right-handed alpha
Helix 20	AC2	A	397	407	Right-handed alpha
Helix 21	AC3	A	412	429	Right-handed alpha
Helix 22	AC4	A	450	463	Right-handed alpha
Helix 23	AC5	A	499	511	Right-handed alpha
Helix 24	AC6	A	513	523	Right-handed alpha
Helix 25	AC7	A	526	545	Right-handed alpha
Helix 26	AC8	A	547	555	Right-handed alpha
Helix 27	AC9	A	558	574	Right-handed alpha
Helix 28	AD1	A	576	584	Right-handed alpha
Helix 29	AD2	A	593	602	Right-handed alpha
Helix 30	AD3	A	603	608	Right-handed alpha
Helix 31	AD4	A	609	622	Right-handed alpha
Helix 32	AD5	A	629	639	Right-handed alpha
Helix 33	AD6	A	640	645	Right-handed 310
Helix 34	AD7	A	699	714	Right-handed alpha
Helix 35	AD8	A	715	741	Right-handed alpha
Helix 36	AD9	A	751	774	Right-handed alpha
Helix 37	AE1	A	780	791	Right-handed alpha
Helix 38	AE2	A	791	812	Right-handed alpha
Helix 39	AE3	A	813	815	Right-handed 310
Helix 40	AE4	A	816	839	Right-handed alpha
Helix 41	AE5	A	840	842	Right-handed 310
Helix 42	AE6	A	845	882	Right-handed alpha
Helix 43	AE7	A	887	903	Right-handed alpha
Helix 44	AE8	A	913	917	Right-handed 310
Helix 45	AE9	A	925	932	Right-handed alpha
Helix 46	AF1	A	942	958	Right-handed alpha
Helix 47	AF2	A	960	979	Right-handed alpha
Helix 48	AF3	A	979	997	Right-handed alpha
Helix 49	AF4	A	1005	1020	Right-handed alpha
Helix 50	AF5	A	1034	1062	Right-handed alpha
Helix 51	AF6	A	1063	1092	Right-handed alpha
Helix 52	AF7	B	40	50	Right-handed alpha
Helix 53	AF8	B	73	91	Right-handed alpha
Helix 54	AF9	B	102	119	Right-handed alpha
Helix 55	AG1	B	135	137	Right-handed 310
Helix 56	AG2	B	139	145	Right-handed alpha
Helix 57	AG3	B	185	201	Right-handed alpha
Helix 58	AG4	B	223	225	Right-handed 310
Helix 59	AG5	B	226	236	Right-handed alpha
Helix 60	AG6	B	248	260	Right-handed alpha
Helix 61	AG7	B	263	275	Right-handed alpha
Helix 62	AG8	B	280	298	Right-handed alpha
Helix 63	AG9	B	311	328	Right-handed alpha
Helix 64	AH1	B	330	333	Right-handed 310
Helix 65	AH2	B	334	345	Right-handed alpha
Helix 66	AH3	B	346	353	Right-handed alpha
Helix 67	AH4	B	363	365	Right-handed 310
Helix 68	AH5	B	366	376	Right-handed alpha
Helix 69	AH6	B	378	388	Right-handed alpha
Helix 70	AH7	B	391	396	Right-handed alpha
Helix 71	AH8	B	397	407	Right-handed alpha
Helix 72	AH9	B	412	429	Right-handed alpha
Helix 73	AI1	B	450	463	Right-handed alpha
Helix 74	AI2	B	499	511	Right-handed alpha
Helix 75	AI3	B	513	523	Right-handed alpha
Helix 76	AI4	B	526	545	Right-handed alpha
Helix 77	AI5	B	547	555	Right-handed alpha
Helix 78	AI6	B	558	574	Right-handed alpha
Helix 79	AI7	B	576	584	Right-handed alpha
Helix 80	AI8	B	593	602	Right-handed alpha
Helix 81	AI9	B	603	608	Right-handed alpha
Helix 82	AJ1	B	609	622	Right-handed alpha
Helix 83	AJ2	B	629	639	Right-handed alpha
Helix 84	AJ3	B	640	645	Right-handed 310
Helix 85	AJ4	B	699	714	Right-handed alpha
Helix 86	AJ5	B	715	741	Right-handed alpha
Helix 87	AJ6	B	751	774	Right-handed alpha
Helix 88	AJ7	B	780	791	Right-handed alpha
Helix 89	AJ8	B	791	812	Right-handed alpha
Helix 90	AJ9	B	813	815	Right-handed 310
Helix 91	AK1	B	816	839	Right-handed alpha
Helix 92	AK2	B	840	842	Right-handed 310
Helix 93	AK3	B	845	882	Right-handed alpha
Helix 94	AK4	B	887	903	Right-handed alpha
Helix 95	AK5	B	913	917	Right-handed 310
Helix 96	AK6	B	925	932	Right-handed alpha
Helix 97	AK7	B	942	958	Right-handed alpha
Helix 98	AK8	B	960	979	Right-handed alpha
Helix 99	AK9	B	979	997	Right-handed alpha
Helix 100	AL1	B	1005	1020	Right-handed alpha
Helix 101	AL2	B	1034	1062	Right-handed alpha
Helix 102	AL3	B	1063	1092	Right-handed alpha
Helix 103	AL4	C	40	50	Right-handed alpha
Helix 104	AL5	C	73	91	Right-handed alpha
Helix 105	AL6	C	102	119	Right-handed alpha
Helix 106	AL7	C	135	137	Right-handed 310
Helix 107	AL8	C	139	145	Right-handed alpha
Helix 108	AL9	C	185	201	Right-handed alpha
Helix 109	AM1	C	223	225	Right-handed 310
Helix 110	AM2	C	226	236	Right-handed alpha
Helix 111	AM3	C	248	260	Right-handed alpha
Helix 112	AM4	C	263	275	Right-handed alpha
Helix 113	AM5	C	280	298	Right-handed alpha
Helix 114	AM6	C	311	328	Right-handed alpha
Helix 115	AM7	C	330	333	Right-handed 310
Helix 116	AM8	C	334	345	Right-handed alpha
Helix 117	AM9	C	346	353	Right-handed alpha
Helix 118	AN1	C	363	365	Right-handed 310
Helix 119	AN2	C	366	376	Right-handed alpha
Helix 120	AN3	C	378	388	Right-handed alpha
Helix 121	AN4	C	391	396	Right-handed alpha
Helix 122	AN5	C	397	407	Right-handed alpha
Helix 123	AN6	C	412	429	Right-handed alpha
Helix 124	AN7	C	450	463	Right-handed alpha
Helix 125	AN8	C	499	511	Right-handed alpha
Helix 126	AN9	C	513	523	Right-handed alpha
Helix 127	AO1	C	526	545	Right-handed alpha
Helix 128	AO2	C	547	555	Right-handed alpha
Helix 129	AO3	C	558	574	Right-handed alpha
Helix 130	AO4	C	576	584	Right-handed alpha
Helix 131	AO5	C	593	602	Right-handed alpha
Helix 132	AO6	C	603	608	Right-handed alpha
Helix 133	AO7	C	609	622	Right-handed alpha
Helix 134	AO8	C	629	639	Right-handed alpha
Helix 135	AO9	C	640	645	Right-handed 310
Helix 136	AP1	C	699	714	Right-handed alpha
Helix 137	AP2	C	715	741	Right-handed alpha
Helix 138	AP3	C	751	774	Right-handed alpha
Helix 139	AP4	C	780	791	Right-handed alpha
Helix 140	AP5	C	791	812	Right-handed alpha
Helix 141	AP6	C	813	815	Right-handed 310
Helix 142	AP7	C	816	839	Right-handed alpha
Helix 143	AP8	C	840	842	Right-handed 310
Helix 144	AP9	C	845	882	Right-handed alpha
Helix 145	AQ1	C	887	903	Right-handed alpha
Helix 146	AQ2	C	913	917	Right-handed 310
Helix 147	AQ3	C	925	932	Right-handed alpha
Helix 148	AQ4	C	942	958	Right-handed alpha
Helix 149	AQ5	C	960	979	Right-handed alpha
Helix 150	AQ6	C	979	997	Right-handed alpha
Helix 151	AQ7	C	1005	1020	Right-handed alpha
Helix 152	AQ8	C	1034	1062	Right-handed alpha
Helix 153	AQ9	C	1063	1092	Right-handed alpha
Helix 154	AR1	D	40	50	Right-handed alpha
Helix 155	AR2	D	73	91	Right-handed alpha
Helix 156	AR3	D	102	119	Right-handed alpha
Helix 157	AR4	D	135	137	Right-handed 310
Helix 158	AR5	D	139	145	Right-handed alpha
Helix 159	AR6	D	185	201	Right-handed alpha
Helix 160	AR7	D	223	225	Right-handed 310
Helix 161	AR8	D	226	236	Right-handed alpha
Helix 162	AR9	D	248	260	Right-handed alpha
Helix 163	AS1	D	263	275	Right-handed alpha
Helix 164	AS2	D	280	298	Right-handed alpha
Helix 165	AS3	D	311	328	Right-handed alpha
Helix 166	AS4	D	330	333	Right-handed 310
Helix 167	AS5	D	334	345	Right-handed alpha
Helix 168	AS6	D	346	353	Right-handed alpha
Helix 169	AS7	D	363	365	Right-handed 310
Helix 170	AS8	D	366	376	Right-handed alpha
Helix 171	AS9	D	378	388	Right-handed alpha
Helix 172	AT1	D	391	396	Right-handed alpha
Helix 173	AT2	D	397	407	Right-handed alpha
Helix 174	AT3	D	412	429	Right-handed alpha
Helix 175	AT4	D	450	463	Right-handed alpha
Helix 176	AT5	D	499	511	Right-handed alpha
Helix 177	AT6	D	513	523	Right-handed alpha
Helix 178	AT7	D	526	545	Right-handed alpha
Helix 179	AT8	D	547	555	Right-handed alpha
Helix 180	AT9	D	558	574	Right-handed alpha
Helix 181	AU1	D	576	584	Right-handed alpha
Helix 182	AU2	D	593	602	Right-handed alpha
Helix 183	AU3	D	603	608	Right-handed alpha
Helix 184	AU4	D	609	622	Right-handed alpha
Helix 185	AU5	D	629	639	Right-handed alpha
Helix 186	AU6	D	640	645	Right-handed 310
Helix 187	AU7	D	699	714	Right-handed alpha
Helix 188	AU8	D	715	741	Right-handed alpha
Helix 189	AU9	D	751	774	Right-handed alpha
Helix 190	AV1	D	780	791	Right-handed alpha
Helix 191	AV2	D	791	812	Right-handed alpha
Helix 192	AV3	D	813	815	Right-handed 310
Helix 193	AV4	D	816	839	Right-handed alpha
Helix 194	AV5	D	840	842	Right-handed 310
Helix 195	AV6	D	845	882	Right-handed alpha
Helix 196	AV7	D	887	903	Right-handed alpha
Helix 197	AV8	D	913	917	Right-handed 310
Helix 198	AV9	D	925	932	Right-handed alpha
Helix 199	AW1	D	942	958	Right-handed alpha
Helix 200	AW2	D	960	979	Right-handed alpha
Helix 201	AW3	D	979	997	Right-handed alpha
Helix 202	AW4	D	1005	1020	Right-handed alpha
Helix 203	AW5	D	1034	1062	Right-handed alpha
Helix 204	AW6	D	1063	1092	Right-handed alpha

There are 12 sheets in PDB entry 9P3R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	133	first strand
Strand 2	A	173	177	parallel
Strand 3	A	28	35	parallel
Strand 4	A	18	23	anti-parallel
Strand 5	A	152	155	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	93	96	first strand
Strand 2	A	59	65	parallel
Strand 3	A	215	220	parallel
Strand 4	A	240	243	parallel
Strand 5	A	301	304	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	202	204	first strand
Strand 2	A	210	212	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	129	133	first strand
Strand 2	B	173	177	parallel
Strand 3	B	28	35	parallel
Strand 4	B	18	23	anti-parallel
Strand 5	B	152	155	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	93	96	first strand
Strand 2	B	59	65	parallel
Strand 3	B	215	220	parallel
Strand 4	B	240	243	parallel
Strand 5	B	301	304	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	202	204	first strand
Strand 2	B	210	212	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	129	133	first strand
Strand 2	C	173	177	parallel
Strand 3	C	28	35	parallel
Strand 4	C	18	23	anti-parallel
Strand 5	C	152	155	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	93	96	first strand
Strand 2	C	59	65	parallel
Strand 3	C	215	220	parallel
Strand 4	C	240	243	parallel
Strand 5	C	301	304	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	202	204	first strand
Strand 2	C	210	212	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	129	133	first strand
Strand 2	D	173	177	parallel
Strand 3	D	28	35	parallel
Strand 4	D	18	23	anti-parallel
Strand 5	D	152	155	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	93	96	first strand
Strand 2	D	59	65	parallel
Strand 3	D	215	220	parallel
Strand 4	D	240	243	parallel
Strand 5	D	301	304	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	202	204	first strand
Strand 2	D	210	212	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9P3R

Analysis of interatomic Contacts of Structural Units in PDB entry:
9P3R