Analysis of interatomic Contacts of Structural Units in PDB entry:
9P6A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9P6A entry

There are 2 chains in PDB entry 9P6A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 351HIS 617
B
 SER 347TYR 618
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 9P6A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
397 411Right-handed alpha
Helix 2
AA2
A
445 453Right-handed alpha
Helix 3
AA3
A
456 477Right-handed alpha
Helix 4
AA4
A
529 534Right-handed alpha
Helix 5
AA5
A
540 557Right-handed alpha
Helix 6
AA6
A
565 576Right-handed alpha
Helix 7
AA7
A
587 598Right-handed alpha
Helix 8
AA8
A
600 604Right-handed 310
Helix 9
AA9
A
606 611Right-handed alpha
Helix 10
AB1
A
612 617Right-handed 310
Helix 11
AB2
B
397 411Right-handed alpha
Helix 12
AB3
B
445 453Right-handed alpha
Helix 13
AB4
B
456 477Right-handed alpha
Helix 14
AB5
B
485 487Right-handed 310
Helix 15
AB6
B
529 534Right-handed alpha
Helix 16
AB7
B
539 557Right-handed alpha
Helix 17
AB8
B
565 576Right-handed alpha
Helix 18
AB9
B
587 598Right-handed alpha
Helix 19
AC1
B
600 604Right-handed 310
Helix 20
AC2
B
606 611Right-handed alpha
Helix 21
AC3
B
612 617Right-handed 310
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There are 4 sheets in PDB entry 9P6A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 365first strand
Strand 2
A
368 375anti-parallel
Strand 3
A
381 388anti-parallel
Strand 4
A
432 438anti-parallel
Strand 5
A
421 427anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
443 444first strand
Strand 2
A
489 491anti-parallel
Strand 3
A
497 499anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
356 363first strand
Strand 2
B
370 375anti-parallel
Strand 3
B
381 388anti-parallel
Strand 4
B
432 438anti-parallel
Strand 5
B
421 427anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
443 444first strand
Strand 2
B
489 491anti-parallel
Strand 3
B
497 499anti-parallel
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