Analysis of interatomic Contacts of Structural Units in PDB entry:
9P6B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9P6B entry

There are 4 chains in PDB entry 9P6B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 115SER 781
B
 ARG 115SER 781
C
 ARG 115SER 781
D
 ARG 115SER 781
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are124 helices in PDB entry 9P6B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
115 124Right-handed alpha
Helix 2
AA2
A
128 139Right-handed alpha
Helix 3
AA3
A
142 149Right-handed alpha
Helix 4
AA4
A
157 165Right-handed alpha
Helix 5
AA5
A
173 184Right-handed alpha
Helix 6
AA6
A
187 192Right-handed alpha
Helix 7
AA7
A
204 212Right-handed alpha
Helix 8
AA8
A
214 224Right-handed alpha
Helix 9
AA9
A
234 238Right-handed 310
Helix 10
AB1
A
251 258Right-handed alpha
Helix 11
AB2
A
261 270Right-handed alpha
Helix 12
AB3
A
287 295Right-handed alpha
Helix 13
AB4
A
299 320Right-handed alpha
Helix 14
AB5
A
325 329Right-handed 310
Helix 15
AB6
A
336 344Right-handed alpha
Helix 16
AB7
A
346 355Right-handed alpha
Helix 17
AB8
A
360 364Right-handed 310
Helix 18
AB9
A
395 402Right-handed alpha
Helix 19
AC1
A
418 430Right-handed alpha
Helix 20
AC2
A
430 455Right-handed alpha
Helix 21
AC3
A
469 498Right-handed alpha
Helix 22
AC4
A
502 509Right-handed alpha
Helix 23
AC5
A
510 531Right-handed alpha
Helix 24
AC6
A
536 551Right-handed alpha
Helix 25
AC7
A
552 558Right-handed 310
Helix 26
AC8
A
559 575Right-handed alpha
Helix 27
AC9
A
575 599Right-handed alpha
Helix 28
AD1
A
630 639Right-handed alpha
Helix 29
AD2
A
656 671Right-handed alpha
Helix 30
AD3
A
674 713Right-handed alpha
Helix 31
AD4
A
762 766Right-handed 310
Helix 32
AD5
B
116 124Right-handed alpha
Helix 33
AD6
B
128 139Right-handed alpha
Helix 34
AD7
B
142 149Right-handed alpha
Helix 35
AD8
B
157 165Right-handed alpha
Helix 36
AD9
B
173 184Right-handed alpha
Helix 37
AE1
B
187 192Right-handed alpha
Helix 38
AE2
B
204 212Right-handed alpha
Helix 39
AE3
B
214 224Right-handed alpha
Helix 40
AE4
B
234 238Right-handed 310
Helix 41
AE5
B
251 258Right-handed alpha
Helix 42
AE6
B
261 270Right-handed alpha
Helix 43
AE7
B
287 295Right-handed alpha
Helix 44
AE8
B
299 320Right-handed alpha
Helix 45
AE9
B
325 329Right-handed 310
Helix 46
AF1
B
336 344Right-handed alpha
Helix 47
AF2
B
346 355Right-handed alpha
Helix 48
AF3
B
360 364Right-handed 310
Helix 49
AF4
B
395 402Right-handed alpha
Helix 50
AF5
B
418 430Right-handed alpha
Helix 51
AF6
B
430 455Right-handed alpha
Helix 52
AF7
B
469 498Right-handed alpha
Helix 53
AF8
B
502 509Right-handed alpha
Helix 54
AF9
B
510 531Right-handed alpha
Helix 55
AG1
B
536 551Right-handed alpha
Helix 56
AG2
B
552 558Right-handed 310
Helix 57
AG3
B
559 575Right-handed alpha
Helix 58
AG4
B
575 599Right-handed alpha
Helix 59
AG5
B
630 639Right-handed alpha
Helix 60
AG6
B
656 671Right-handed alpha
Helix 61
AG7
B
674 713Right-handed alpha
Helix 62
AG8
B
762 766Right-handed 310
Helix 63
AG9
C
116 124Right-handed alpha
Helix 64
AH1
C
128 139Right-handed alpha
Helix 65
AH2
C
142 149Right-handed alpha
Helix 66
AH3
C
157 165Right-handed alpha
Helix 67
AH4
C
173 184Right-handed alpha
Helix 68
AH5
C
187 192Right-handed alpha
Helix 69
AH6
C
204 212Right-handed alpha
Helix 70
AH7
C
214 224Right-handed alpha
Helix 71
AH8
C
234 238Right-handed 310
Helix 72
AH9
C
251 258Right-handed alpha
Helix 73
AI1
C
261 270Right-handed alpha
Helix 74
AI2
C
287 295Right-handed alpha
Helix 75
AI3
C
299 320Right-handed alpha
Helix 76
AI4
C
325 329Right-handed 310
Helix 77
AI5
C
336 344Right-handed alpha
Helix 78
AI6
C
346 355Right-handed alpha
Helix 79
AI7
C
360 364Right-handed 310
Helix 80
AI8
C
395 402Right-handed alpha
Helix 81
AI9
C
418 430Right-handed alpha
Helix 82
AJ1
C
430 455Right-handed alpha
Helix 83
AJ2
C
469 498Right-handed alpha
Helix 84
AJ3
C
502 509Right-handed alpha
Helix 85
AJ4
C
510 531Right-handed alpha
Helix 86
AJ5
C
536 551Right-handed alpha
Helix 87
AJ6
C
552 558Right-handed 310
Helix 88
AJ7
C
559 575Right-handed alpha
Helix 89
AJ8
C
575 599Right-handed alpha
Helix 90
AJ9
C
630 639Right-handed alpha
Helix 91
AK1
C
656 671Right-handed alpha
Helix 92
AK2
C
674 713Right-handed alpha
Helix 93
AK3
C
762 766Right-handed 310
Helix 94
AK4
D
116 124Right-handed alpha
Helix 95
AK5
D
128 139Right-handed alpha
Helix 96
AK6
D
142 149Right-handed alpha
Helix 97
AK7
D
157 165Right-handed alpha
Helix 98
AK8
D
173 184Right-handed alpha
Helix 99
AK9
D
187 192Right-handed alpha
Helix 100
AL1
D
204 212Right-handed alpha
Helix 101
AL2
D
214 224Right-handed alpha
Helix 102
AL3
D
234 238Right-handed 310
Helix 103
AL4
D
251 258Right-handed alpha
Helix 104
AL5
D
261 270Right-handed alpha
Helix 105
AL6
D
287 295Right-handed alpha
Helix 106
AL7
D
299 320Right-handed alpha
Helix 107
AL8
D
325 329Right-handed 310
Helix 108
AL9
D
336 344Right-handed alpha
Helix 109
AM1
D
346 355Right-handed alpha
Helix 110
AM2
D
360 364Right-handed 310
Helix 111
AM3
D
395 402Right-handed alpha
Helix 112
AM4
D
418 430Right-handed alpha
Helix 113
AM5
D
430 455Right-handed alpha
Helix 114
AM6
D
469 498Right-handed alpha
Helix 115
AM7
D
502 509Right-handed alpha
Helix 116
AM8
D
510 531Right-handed alpha
Helix 117
AM9
D
536 551Right-handed alpha
Helix 118
AN1
D
552 558Right-handed 310
Helix 119
AN2
D
559 575Right-handed alpha
Helix 120
AN3
D
575 599Right-handed alpha
Helix 121
AN4
D
630 639Right-handed alpha
Helix 122
AN5
D
656 671Right-handed alpha
Helix 123
AN6
D
674 713Right-handed alpha
Helix 124
AN7
D
762 766Right-handed 310
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There are 4 sheets in PDB entry 9P6B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 373first strand
Strand 2
A
378 384anti-parallel
Strand 3
A
737 748anti-parallel
Strand 4
A
725 731anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
369 373first strand
Strand 2
B
378 384anti-parallel
Strand 3
B
737 748anti-parallel
Strand 4
B
725 731anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
369 373first strand
Strand 2
C
378 384anti-parallel
Strand 3
C
737 748anti-parallel
Strand 4
C
725 731anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
369 373first strand
Strand 2
D
378 384anti-parallel
Strand 3
D
737 748anti-parallel
Strand 4
D
725 731anti-parallel
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