Analysis of interatomic Contacts of Structural Units in PDB entry:
9P6I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9P6I entry

There are 8 chains in PDB entry 9P6I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 13	LYS 192
B	HIS 12	LYS 187
C	SER 15	LYS 187
D	SER 15	ALA 186
E	HIS 12	LYS 192
F	HIS 12	LYS 187
G	SER 15	GLY 188
H	SER 15	SER 65

There are 49 helices in PDB entry 9P6I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	16	29	Right-handed alpha
Helix 2	AA2	A	47	55	Right-handed alpha
Helix 3	AA3	A	62	70	Right-handed alpha
Helix 4	AA4	A	107	130	Right-handed alpha
Helix 5	AA5	A	134	151	Right-handed alpha
Helix 6	AA6	A	157	188	Right-handed alpha
Helix 7	AA7	B	14	30	Right-handed alpha
Helix 8	AA8	B	47	55	Right-handed alpha
Helix 9	AA9	B	62	71	Right-handed alpha
Helix 10	AB1	B	107	150	Right-handed alpha
Helix 11	AB2	B	151	153	Right-handed 310
Helix 12	AB3	B	157	183	Right-handed alpha
Helix 13	AB4	C	17	29	Right-handed alpha
Helix 14	AB5	C	47	54	Right-handed alpha
Helix 15	AB6	C	62	71	Right-handed alpha
Helix 16	AB7	C	107	137	Right-handed alpha
Helix 17	AB8	C	137	147	Right-handed alpha
Helix 18	AB9	C	160	185	Right-handed alpha
Helix 19	AC1	D	17	30	Right-handed alpha
Helix 20	AC2	D	47	55	Right-handed alpha
Helix 21	AC3	D	62	70	Right-handed alpha
Helix 22	AC4	D	107	148	Right-handed alpha
Helix 23	AC5	D	157	161	Right-handed 310
Helix 24	AC6	D	165	185	Right-handed alpha
Helix 25	AC7	E	13	30	Right-handed alpha
Helix 26	AC8	E	47	54	Right-handed alpha
Helix 27	AC9	E	62	71	Right-handed alpha
Helix 28	AD1	E	107	128	Right-handed alpha
Helix 29	AD2	E	134	151	Right-handed alpha
Helix 30	AD3	E	157	188	Right-handed alpha
Helix 31	AD4	F	15	30	Right-handed alpha
Helix 32	AD5	F	47	55	Right-handed alpha
Helix 33	AD6	F	62	70	Right-handed alpha
Helix 34	AD7	F	107	124	Right-handed alpha
Helix 35	AD8	F	124	136	Right-handed alpha
Helix 36	AD9	F	137	149	Right-handed alpha
Helix 37	AE1	F	157	184	Right-handed alpha
Helix 38	AE2	G	16	30	Right-handed alpha
Helix 39	AE3	G	47	55	Right-handed alpha
Helix 40	AE4	G	62	71	Right-handed alpha
Helix 41	AE5	G	109	128	Right-handed alpha
Helix 42	AE6	G	129	145	Right-handed alpha
Helix 43	AE7	G	161	188	Right-handed alpha
Helix 44	AE8	H	16	28	Right-handed alpha
Helix 45	AE9	H	47	55	Right-handed alpha
Helix 46	AF1	H	62	71	Right-handed alpha
Helix 47	AF2	H	107	121	Right-handed alpha
Helix 48	AF3	H	124	148	Right-handed alpha
Helix 49	AF4	H	165	186	Right-handed alpha

There are 8 sheets in PDB entry 9P6I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	46	first strand
Strand 2	A	33	36	anti-parallel
Strand 3	A	100	106	anti-parallel
Strand 4	A	88	95	anti-parallel
Strand 5	A	81	82	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	46	first strand
Strand 2	B	33	36	anti-parallel
Strand 3	B	101	106	anti-parallel
Strand 4	B	88	94	anti-parallel
Strand 5	B	80	82	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	46	first strand
Strand 2	C	33	37	anti-parallel
Strand 3	C	100	106	anti-parallel
Strand 4	C	88	95	anti-parallel
Strand 5	C	81	82	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	45	46	first strand
Strand 2	D	33	36	anti-parallel
Strand 3	D	100	106	anti-parallel
Strand 4	D	88	95	anti-parallel
Strand 5	D	81	82	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	43	46	first strand
Strand 2	E	33	37	anti-parallel
Strand 3	E	100	106	anti-parallel
Strand 4	E	88	95	anti-parallel
Strand 5	E	81	82	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	43	46	first strand
Strand 2	F	33	37	anti-parallel
Strand 3	F	100	106	anti-parallel
Strand 4	F	88	95	anti-parallel
Strand 5	F	81	82	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	43	46	first strand
Strand 2	G	33	37	anti-parallel
Strand 3	G	100	106	anti-parallel
Strand 4	G	88	95	anti-parallel
Strand 5	G	81	82	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	43	46	first strand
Strand 2	H	33	37	anti-parallel
Strand 3	H	100	106	anti-parallel
Strand 4	H	88	95	anti-parallel
Strand 5	H	81	82	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9P6I

Analysis of interatomic Contacts of Structural Units in PDB entry:
9P6I