Analysis of interatomic Contacts of Structural Units in PDB entry:
9P8T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9P8T entry

There are 16 chains in PDB entry 9P8T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 0	CYS 468
B	SER 0	CYS 468
D	SER 0	CYS 468
E	SER 0	CYS 468
G	SER 0	CYS 468
H	SER 0	CYS 468
J	SER 0	CYS 468
K	SER 0	CYS 468
M	T 2	T 2
N	T 2	T 2
O	T 2	T 2
P	T 2	T 2
Q	T 2	T 2
R	T 2	T 2
S	T 2	T 2
T	T 2	T 2

There are200 helices in PDB entry 9P8T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	7	Right-handed alpha
Helix 2	AA2	A	20	24	Right-handed 310
Helix 3	AA3	A	30	42	Right-handed alpha
Helix 4	AA4	A	42	48	Right-handed alpha
Helix 5	AA5	A	49	51	Right-handed 310
Helix 6	AA6	A	65	87	Right-handed alpha
Helix 7	AA7	A	88	93	Right-handed alpha
Helix 8	AA8	A	101	116	Right-handed alpha
Helix 9	AA9	A	124	140	Right-handed alpha
Helix 10	AB1	A	149	151	Right-handed 310
Helix 11	AB2	A	152	157	Right-handed alpha
Helix 12	AB3	A	159	170	Right-handed alpha
Helix 13	AB4	A	183	191	Right-handed alpha
Helix 14	AB5	A	213	225	Right-handed alpha
Helix 15	AB6	A	232	257	Right-handed alpha
Helix 16	AB7	A	261	272	Right-handed alpha
Helix 17	AB8	A	278	298	Right-handed alpha
Helix 18	AB9	A	301	332	Right-handed alpha
Helix 19	AC1	A	332	337	Right-handed alpha
Helix 20	AC2	A	352	367	Right-handed alpha
Helix 21	AC3	A	370	396	Right-handed alpha
Helix 22	AC4	A	407	417	Right-handed alpha
Helix 23	AC5	A	418	427	Right-handed alpha
Helix 24	AC6	A	432	447	Right-handed alpha
Helix 25	AC7	A	449	464	Right-handed alpha
Helix 26	AC8	B	2	7	Right-handed alpha
Helix 27	AC9	B	20	24	Right-handed 310
Helix 28	AD1	B	30	42	Right-handed alpha
Helix 29	AD2	B	42	48	Right-handed alpha
Helix 30	AD3	B	49	51	Right-handed 310
Helix 31	AD4	B	65	87	Right-handed alpha
Helix 32	AD5	B	88	93	Right-handed alpha
Helix 33	AD6	B	101	116	Right-handed alpha
Helix 34	AD7	B	124	140	Right-handed alpha
Helix 35	AD8	B	149	151	Right-handed 310
Helix 36	AD9	B	152	157	Right-handed alpha
Helix 37	AE1	B	159	170	Right-handed alpha
Helix 38	AE2	B	183	191	Right-handed alpha
Helix 39	AE3	B	213	225	Right-handed alpha
Helix 40	AE4	B	232	257	Right-handed alpha
Helix 41	AE5	B	261	272	Right-handed alpha
Helix 42	AE6	B	278	298	Right-handed alpha
Helix 43	AE7	B	301	332	Right-handed alpha
Helix 44	AE8	B	332	337	Right-handed alpha
Helix 45	AE9	B	352	367	Right-handed alpha
Helix 46	AF1	B	370	396	Right-handed alpha
Helix 47	AF2	B	407	417	Right-handed alpha
Helix 48	AF3	B	418	427	Right-handed alpha
Helix 49	AF4	B	432	447	Right-handed alpha
Helix 50	AF5	B	449	464	Right-handed alpha
Helix 51	AF6	D	2	7	Right-handed alpha
Helix 52	AF7	D	20	24	Right-handed 310
Helix 53	AF8	D	30	42	Right-handed alpha
Helix 54	AF9	D	42	48	Right-handed alpha
Helix 55	AG1	D	49	51	Right-handed 310
Helix 56	AG2	D	65	87	Right-handed alpha
Helix 57	AG3	D	88	93	Right-handed alpha
Helix 58	AG4	D	101	116	Right-handed alpha
Helix 59	AG5	D	124	140	Right-handed alpha
Helix 60	AG6	D	149	151	Right-handed 310
Helix 61	AG7	D	152	157	Right-handed alpha
Helix 62	AG8	D	159	170	Right-handed alpha
Helix 63	AG9	D	183	191	Right-handed alpha
Helix 64	AH1	D	213	225	Right-handed alpha
Helix 65	AH2	D	232	257	Right-handed alpha
Helix 66	AH3	D	261	272	Right-handed alpha
Helix 67	AH4	D	278	298	Right-handed alpha
Helix 68	AH5	D	301	332	Right-handed alpha
Helix 69	AH6	D	332	337	Right-handed alpha
Helix 70	AH7	D	352	367	Right-handed alpha
Helix 71	AH8	D	370	396	Right-handed alpha
Helix 72	AH9	D	407	417	Right-handed alpha
Helix 73	AI1	D	418	427	Right-handed alpha
Helix 74	AI2	D	432	447	Right-handed alpha
Helix 75	AI3	D	449	464	Right-handed alpha
Helix 76	AI4	E	2	7	Right-handed alpha
Helix 77	AI5	E	20	24	Right-handed 310
Helix 78	AI6	E	30	42	Right-handed alpha
Helix 79	AI7	E	42	48	Right-handed alpha
Helix 80	AI8	E	49	51	Right-handed 310
Helix 81	AI9	E	65	87	Right-handed alpha
Helix 82	AJ1	E	88	93	Right-handed alpha
Helix 83	AJ2	E	101	116	Right-handed alpha
Helix 84	AJ3	E	124	140	Right-handed alpha
Helix 85	AJ4	E	149	151	Right-handed 310
Helix 86	AJ5	E	152	157	Right-handed alpha
Helix 87	AJ6	E	159	170	Right-handed alpha
Helix 88	AJ7	E	183	191	Right-handed alpha
Helix 89	AJ8	E	213	225	Right-handed alpha
Helix 90	AJ9	E	232	257	Right-handed alpha
Helix 91	AK1	E	261	272	Right-handed alpha
Helix 92	AK2	E	278	298	Right-handed alpha
Helix 93	AK3	E	301	332	Right-handed alpha
Helix 94	AK4	E	332	337	Right-handed alpha
Helix 95	AK5	E	352	367	Right-handed alpha
Helix 96	AK6	E	370	396	Right-handed alpha
Helix 97	AK7	E	407	417	Right-handed alpha
Helix 98	AK8	E	418	427	Right-handed alpha
Helix 99	AK9	E	432	447	Right-handed alpha
Helix 100	AL1	E	449	464	Right-handed alpha
Helix 101	AL2	G	2	7	Right-handed alpha
Helix 102	AL3	G	20	24	Right-handed 310
Helix 103	AL4	G	30	42	Right-handed alpha
Helix 104	AL5	G	42	48	Right-handed alpha
Helix 105	AL6	G	49	51	Right-handed 310
Helix 106	AL7	G	65	87	Right-handed alpha
Helix 107	AL8	G	88	93	Right-handed alpha
Helix 108	AL9	G	101	116	Right-handed alpha
Helix 109	AM1	G	124	140	Right-handed alpha
Helix 110	AM2	G	149	151	Right-handed 310
Helix 111	AM3	G	152	157	Right-handed alpha
Helix 112	AM4	G	159	170	Right-handed alpha
Helix 113	AM5	G	183	191	Right-handed alpha
Helix 114	AM6	G	213	225	Right-handed alpha
Helix 115	AM7	G	232	257	Right-handed alpha
Helix 116	AM8	G	261	272	Right-handed alpha
Helix 117	AM9	G	278	298	Right-handed alpha
Helix 118	AN1	G	301	332	Right-handed alpha
Helix 119	AN2	G	332	337	Right-handed alpha
Helix 120	AN3	G	352	367	Right-handed alpha
Helix 121	AN4	G	370	396	Right-handed alpha
Helix 122	AN5	G	407	417	Right-handed alpha
Helix 123	AN6	G	418	427	Right-handed alpha
Helix 124	AN7	G	432	447	Right-handed alpha
Helix 125	AN8	G	449	464	Right-handed alpha
Helix 126	AN9	H	2	7	Right-handed alpha
Helix 127	AO1	H	20	24	Right-handed 310
Helix 128	AO2	H	30	42	Right-handed alpha
Helix 129	AO3	H	42	48	Right-handed alpha
Helix 130	AO4	H	49	51	Right-handed 310
Helix 131	AO5	H	65	87	Right-handed alpha
Helix 132	AO6	H	88	93	Right-handed alpha
Helix 133	AO7	H	101	116	Right-handed alpha
Helix 134	AO8	H	124	140	Right-handed alpha
Helix 135	AO9	H	149	151	Right-handed 310
Helix 136	AP1	H	152	157	Right-handed alpha
Helix 137	AP2	H	159	170	Right-handed alpha
Helix 138	AP3	H	183	191	Right-handed alpha
Helix 139	AP4	H	213	225	Right-handed alpha
Helix 140	AP5	H	232	257	Right-handed alpha
Helix 141	AP6	H	261	272	Right-handed alpha
Helix 142	AP7	H	278	298	Right-handed alpha
Helix 143	AP8	H	301	332	Right-handed alpha
Helix 144	AP9	H	332	337	Right-handed alpha
Helix 145	AQ1	H	352	367	Right-handed alpha
Helix 146	AQ2	H	370	396	Right-handed alpha
Helix 147	AQ3	H	407	417	Right-handed alpha
Helix 148	AQ4	H	418	427	Right-handed alpha
Helix 149	AQ5	H	432	447	Right-handed alpha
Helix 150	AQ6	H	449	464	Right-handed alpha
Helix 151	AQ7	J	2	7	Right-handed alpha
Helix 152	AQ8	J	20	24	Right-handed 310
Helix 153	AQ9	J	30	42	Right-handed alpha
Helix 154	AR1	J	42	48	Right-handed alpha
Helix 155	AR2	J	49	51	Right-handed 310
Helix 156	AR3	J	65	87	Right-handed alpha
Helix 157	AR4	J	88	93	Right-handed alpha
Helix 158	AR5	J	101	116	Right-handed alpha
Helix 159	AR6	J	124	140	Right-handed alpha
Helix 160	AR7	J	149	151	Right-handed 310
Helix 161	AR8	J	152	157	Right-handed alpha
Helix 162	AR9	J	159	170	Right-handed alpha
Helix 163	AS1	J	183	191	Right-handed alpha
Helix 164	AS2	J	213	225	Right-handed alpha
Helix 165	AS3	J	232	257	Right-handed alpha
Helix 166	AS4	J	261	272	Right-handed alpha
Helix 167	AS5	J	278	298	Right-handed alpha
Helix 168	AS6	J	301	332	Right-handed alpha
Helix 169	AS7	J	332	337	Right-handed alpha
Helix 170	AS8	J	352	367	Right-handed alpha
Helix 171	AS9	J	370	396	Right-handed alpha
Helix 172	AT1	J	407	417	Right-handed alpha
Helix 173	AT2	J	418	427	Right-handed alpha
Helix 174	AT3	J	432	447	Right-handed alpha
Helix 175	AT4	J	449	464	Right-handed alpha
Helix 176	AT5	K	2	7	Right-handed alpha
Helix 177	AT6	K	20	24	Right-handed 310
Helix 178	AT7	K	30	42	Right-handed alpha
Helix 179	AT8	K	42	48	Right-handed alpha
Helix 180	AT9	K	49	51	Right-handed 310
Helix 181	AU1	K	65	87	Right-handed alpha
Helix 182	AU2	K	88	93	Right-handed alpha
Helix 183	AU3	K	101	116	Right-handed alpha
Helix 184	AU4	K	124	140	Right-handed alpha
Helix 185	AU5	K	149	151	Right-handed 310
Helix 186	AU6	K	152	157	Right-handed alpha
Helix 187	AU7	K	159	170	Right-handed alpha
Helix 188	AU8	K	183	191	Right-handed alpha
Helix 189	AU9	K	213	225	Right-handed alpha
Helix 190	AV1	K	232	257	Right-handed alpha
Helix 191	AV2	K	261	272	Right-handed alpha
Helix 192	AV3	K	278	298	Right-handed alpha
Helix 193	AV4	K	301	332	Right-handed alpha
Helix 194	AV5	K	332	337	Right-handed alpha
Helix 195	AV6	K	352	367	Right-handed alpha
Helix 196	AV7	K	370	396	Right-handed alpha
Helix 197	AV8	K	407	417	Right-handed alpha
Helix 198	AV9	K	418	427	Right-handed alpha
Helix 199	AW1	K	432	447	Right-handed alpha
Helix 200	AW2	K	449	464	Right-handed alpha

There are no sheets in PDB entry 9P8T

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9P8T

Analysis of interatomic Contacts of Structural Units in PDB entry:
9P8T