Analysis of interatomic Contacts of Structural Units in PDB entry:
9P8W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9P8W entry

There is 1 chain in PDB entry 9P8W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 459
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 9P8W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 31Right-handed alpha
Helix 2
AA2
A
32 37Right-handed alpha
Helix 3
AA3
A
38 40Right-handed 310
Helix 4
AA4
A
55 77Right-handed alpha
Helix 5
AA5
A
78 87Right-handed 310
Helix 6
AA6
A
89 100Right-handed alpha
Helix 7
AA7
A
108 119Right-handed alpha
Helix 8
AA8
A
126 137Right-handed alpha
Helix 9
AA9
A
150 158Right-handed alpha
Helix 10
AB1
A
163 168Right-handed alpha
Helix 11
AB2
A
187 192Right-handed 310
Helix 12
AB3
A
198 200Right-handed 310
Helix 13
AB4
A
201 210Right-handed alpha
Helix 14
AB5
A
213 221Right-handed alpha
Helix 15
AB6
A
244 269Right-handed alpha
Helix 16
AB7
A
273 281Right-handed alpha
Helix 17
AB8
A
285 295Right-handed alpha
Helix 18
AB9
A
297 300Right-handed 310
Helix 19
AC1
A
301 310Right-handed alpha
Helix 20
AC2
A
313 330Right-handed alpha
Helix 21
AC3
A
343 347Right-handed alpha
Helix 22
AC4
A
353 371Right-handed alpha
Helix 23
AC5
A
374 398Right-handed alpha
Helix 24
AC6
A
398 403Right-handed alpha
Helix 25
AC7
A
404 416Right-handed alpha
Helix 26
AC8
A
420 437Right-handed alpha
Helix 27
AC9
A
439 451Right-handed alpha
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There are 2 sheets in PDB entry 9P8W. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 224first strand
Strand 2
A
239 240anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 336first strand
Strand 2
A
348 352anti-parallel
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