Analysis of interatomic Contacts of Structural Units in PDB entry:
9P95

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9P95 entry

There are 3 chains in PDB entry 9P95 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 1	ARG 587
B	PRO 80	ASN 458
C	PRO 3	HIS 203

There are 16 helices in PDB entry 9P95. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	140	144	Right-handed 310
Helix 2	AA2	A	241	245	Right-handed 310
Helix 3	AA3	A	359	364	Right-handed alpha
Helix 4	AA4	B	142	147	Right-handed 310
Helix 5	AA5	B	148	165	Right-handed alpha
Helix 6	AA6	B	189	195	Right-handed alpha
Helix 7	AA7	B	219	229	Right-handed alpha
Helix 8	AA8	B	241	252	Right-handed alpha
Helix 9	AA9	B	252	257	Right-handed alpha
Helix 10	AB1	B	278	283	Right-handed alpha
Helix 11	AB2	B	300	306	Right-handed 310
Helix 12	AB3	B	310	322	Right-handed alpha
Helix 13	AB4	B	333	344	Right-handed alpha
Helix 14	AB5	B	356	368	Right-handed alpha
Helix 15	AB6	B	403	408	Right-handed 310
Helix 16	AB7	C	63	67	Right-handed 310

There are 23 sheets in PDB entry 9P95. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	12	first strand
Strand 2	A	424	428	anti-parallel
Strand 3	A	414	419	anti-parallel
Strand 4	A	401	405	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	28	first strand
Strand 2	A	31	38	anti-parallel
Strand 3	A	54	59	anti-parallel
Strand 4	A	69	71	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	88	first strand
Strand 2	A	116	117	anti-parallel
Strand 3	A	127	128	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	94	100	first strand
Strand 2	A	108	112	anti-parallel
Strand 3	A	132	135	anti-parallel
Strand 4	A	145	147	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	171	173	first strand
Strand 2	A	177	182	anti-parallel
Strand 3	A	191	196	anti-parallel
Strand 4	A	201	204	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	222	225	first strand
Strand 2	A	234	239	anti-parallel
Strand 3	A	247	253	anti-parallel
Strand 4	A	258	265	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	277	278	first strand
Strand 2	A	290	294	anti-parallel
Strand 3	A	305	311	anti-parallel
Strand 4	A	318	320	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	343	first strand
Strand 2	A	352	356	anti-parallel
Strand 3	A	366	373	anti-parallel
Strand 4	A	376	377	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	343	first strand
Strand 2	A	352	356	anti-parallel
Strand 3	A	366	373	anti-parallel
Strand 4	A	383	386	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	433	434	first strand
Strand 2	A	569	570	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	439	440	first strand
Strand 2	A	462	469	anti-parallel
Strand 3	A	523	531	anti-parallel
Strand 4	A	500	502	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	453	455	first strand
Strand 2	A	458	460	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	513	518	first strand
Strand 2	A	479	484	anti-parallel
Strand 3	A	548	550	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	542	546	first strand
Strand 2	A	579	583	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	89	first strand
Strand 2	B	106	113	anti-parallel
Strand 3	B	446	453	parallel
Strand 4	B	433	440	anti-parallel
Strand 5	B	376	378	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	119	126	first strand
Strand 2	B	417	426	anti-parallel
Strand 3	B	385	393	anti-parallel
Strand 4	B	397	399	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	211	217	first strand
Strand 2	B	170	177	anti-parallel
Strand 3	B	133	140	parallel
Strand 4	B	262	268	parallel
Strand 5	B	323	329	parallel
Strand 6	B	348	351	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	372	374	first strand
Strand 2	B	409	412	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	6	first strand
Strand 2	C	21	27	anti-parallel
Strand 3	C	54	59	anti-parallel
Strand 4	C	48	51	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	12	16	first strand
Strand 2	C	86	90	parallel
Strand 3	C	68	69	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	39	first strand
Strand 2	C	71	76	anti-parallel
Strand 3	C	79	83	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	99	first strand
Strand 2	C	109	114	anti-parallel
Strand 3	C	164	168	anti-parallel
Strand 4	C	140	145	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	134	135	first strand
Strand 2	C	125	131	anti-parallel
Strand 3	C	179	188	anti-parallel
Strand 4	C	191	200	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9P95

Analysis of interatomic Contacts of Structural Units in PDB entry:
9P95