Analysis of interatomic Contacts of Structural Units in PDB entry:
9P9G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9P9G entry

There are 8 chains in PDB entry 9P9G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 416	SER 840
B	THR 416	SER 840
C	THR 416	SER 840
D	THR 416	SER 840
H	ARG 6	GLY 210
F	ARG 6	GLY 210
G	ARG 6	GLY 210
E	ARG 6	GLY 210

There are100 helices in PDB entry 9P9G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	432	435	Right-handed 310
Helix 2	AA2	A	438	442	Right-handed alpha
Helix 3	AA3	A	445	459	Right-handed alpha
Helix 4	AA4	A	468	471	Right-handed 310
Helix 5	AA5	A	483	491	Right-handed alpha
Helix 6	AA6	A	504	509	Right-handed alpha
Helix 7	AA7	A	537	541	Right-handed 310
Helix 8	AA8	A	544	568	Right-handed alpha
Helix 9	AA9	A	594	607	Right-handed alpha
Helix 10	AB1	A	617	646	Right-handed alpha
Helix 11	AB2	A	657	662	Right-handed alpha
Helix 12	AB3	A	675	684	Right-handed alpha
Helix 13	AB4	A	686	699	Right-handed alpha
Helix 14	AB5	A	707	718	Right-handed alpha
Helix 15	AB6	A	728	737	Right-handed alpha
Helix 16	AB7	A	764	778	Right-handed alpha
Helix 17	AB8	A	779	791	Right-handed alpha
Helix 18	AB9	A	798	802	Right-handed 310
Helix 19	AC1	A	810	840	Right-handed alpha
Helix 20	AC2	B	433	437	Right-handed 310
Helix 21	AC3	B	438	441	Right-handed 310
Helix 22	AC4	B	445	459	Right-handed alpha
Helix 23	AC5	B	483	491	Right-handed alpha
Helix 24	AC6	B	504	509	Right-handed alpha
Helix 25	AC7	B	537	541	Right-handed 310
Helix 26	AC8	B	544	568	Right-handed alpha
Helix 27	AC9	B	594	607	Right-handed alpha
Helix 28	AD1	B	617	640	Right-handed alpha
Helix 29	AD2	B	641	646	Right-handed alpha
Helix 30	AD3	B	657	662	Right-handed alpha
Helix 31	AD4	B	675	683	Right-handed alpha
Helix 32	AD5	B	686	697	Right-handed alpha
Helix 33	AD6	B	707	718	Right-handed alpha
Helix 34	AD7	B	728	737	Right-handed alpha
Helix 35	AD8	B	764	779	Right-handed alpha
Helix 36	AD9	B	779	789	Right-handed alpha
Helix 37	AE1	B	810	813	Right-handed 310
Helix 38	AE2	B	814	840	Right-handed alpha
Helix 39	AE3	C	433	437	Right-handed 310
Helix 40	AE4	C	438	443	Right-handed 310
Helix 41	AE5	C	445	459	Right-handed alpha
Helix 42	AE6	C	483	491	Right-handed alpha
Helix 43	AE7	C	504	509	Right-handed alpha
Helix 44	AE8	C	537	541	Right-handed 310
Helix 45	AE9	C	544	568	Right-handed alpha
Helix 46	AF1	C	594	607	Right-handed alpha
Helix 47	AF2	C	617	646	Right-handed alpha
Helix 48	AF3	C	657	664	Right-handed alpha
Helix 49	AF4	C	675	684	Right-handed alpha
Helix 50	AF5	C	686	699	Right-handed alpha
Helix 51	AF6	C	707	719	Right-handed alpha
Helix 52	AF7	C	728	736	Right-handed alpha
Helix 53	AF8	C	764	778	Right-handed alpha
Helix 54	AF9	C	779	789	Right-handed alpha
Helix 55	AG1	C	790	793	Right-handed 310
Helix 56	AG2	C	810	814	Right-handed 310
Helix 57	AG3	C	815	839	Right-handed alpha
Helix 58	AG4	D	432	437	Right-handed 310
Helix 59	AG5	D	439	441	Right-handed 310
Helix 60	AG6	D	445	459	Right-handed alpha
Helix 61	AG7	D	483	491	Right-handed alpha
Helix 62	AG8	D	504	509	Right-handed alpha
Helix 63	AG9	D	537	541	Right-handed 310
Helix 64	AH1	D	544	568	Right-handed alpha
Helix 65	AH2	D	594	607	Right-handed alpha
Helix 66	AH3	D	617	640	Right-handed alpha
Helix 67	AH4	D	657	664	Right-handed alpha
Helix 68	AH5	D	675	682	Right-handed alpha
Helix 69	AH6	D	686	699	Right-handed alpha
Helix 70	AH7	D	707	718	Right-handed alpha
Helix 71	AH8	D	728	736	Right-handed alpha
Helix 72	AH9	D	764	778	Right-handed alpha
Helix 73	AI1	D	779	789	Right-handed alpha
Helix 74	AI2	D	790	793	Right-handed 310
Helix 75	AI3	D	810	813	Right-handed 310
Helix 76	AI4	D	814	840	Right-handed alpha
Helix 77	AI5	H	7	29	Right-handed alpha
Helix 78	AI6	H	70	74	Right-handed 310
Helix 79	AI7	H	95	105	Right-handed alpha
Helix 80	AI8	H	105	125	Right-handed alpha
Helix 81	AI9	H	132	160	Right-handed alpha
Helix 82	AJ1	H	177	210	Right-handed alpha
Helix 83	AJ2	F	8	29	Right-handed alpha
Helix 84	AJ3	F	95	105	Right-handed alpha
Helix 85	AJ4	F	105	125	Right-handed alpha
Helix 86	AJ5	F	132	160	Right-handed alpha
Helix 87	AJ6	F	177	208	Right-handed alpha
Helix 88	AJ7	F	209	210	Right-handed 310
Helix 89	AJ8	G	6	7	Right-handed 310
Helix 90	AJ9	G	8	29	Right-handed alpha
Helix 91	AK1	G	95	105	Right-handed alpha
Helix 92	AK2	G	105	125	Right-handed alpha
Helix 93	AK3	G	132	160	Right-handed alpha
Helix 94	AK4	G	177	210	Right-handed alpha
Helix 95	AK5	E	7	29	Right-handed alpha
Helix 96	AK6	E	95	105	Right-handed alpha
Helix 97	AK7	E	105	124	Right-handed alpha
Helix 98	AK8	E	132	159	Right-handed alpha
Helix 99	AK9	E	177	207	Right-handed alpha
Helix 100	AL1	E	208	210	Right-handed 310

There are 22 sheets in PDB entry 9P9G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	462	466	first strand
Strand 2	A	417	421	parallel
Strand 3	A	496	497	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	429	430	first strand
Strand 2	A	443	444	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	511	520	first strand
Strand 2	A	752	759	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	704	705	first strand
Strand 2	A	668	672	parallel
Strand 3	A	722	727	parallel
Strand 4	A	522	527	anti-parallel
Strand 5	A	742	745	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	462	466	first strand
Strand 2	B	417	421	parallel
Strand 3	B	496	497	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	429	430	first strand
Strand 2	B	443	444	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	511	513	first strand
Strand 2	B	757	759	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	519	520	first strand
Strand 2	B	752	753	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	704	705	first strand
Strand 2	B	668	672	parallel
Strand 3	B	722	727	parallel
Strand 4	B	522	527	anti-parallel
Strand 5	B	742	745	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	531	532	first strand
Strand 2	B	650	651	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	462	466	first strand
Strand 2	C	417	421	parallel
Strand 3	C	496	497	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	511	520	first strand
Strand 2	C	752	759	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	704	705	first strand
Strand 2	C	668	672	parallel
Strand 3	C	722	727	parallel
Strand 4	C	522	527	anti-parallel
Strand 5	C	742	745	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	462	466	first strand
Strand 2	D	417	421	parallel
Strand 3	D	496	497	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	429	430	first strand
Strand 2	D	443	444	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	512	513	first strand
Strand 2	D	757	758	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	518	520	first strand
Strand 2	D	752	754	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	704	705	first strand
Strand 2	D	668	672	parallel
Strand 3	D	722	727	parallel
Strand 4	D	522	527	anti-parallel
Strand 5	D	742	745	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	77	79	first strand
Strand 2	H	65	68	anti-parallel
Strand 3	H	59	61	anti-parallel
Strand 4	H	34	36	anti-parallel
Strand 5	H	175	176	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	77	79	first strand
Strand 2	F	65	69	anti-parallel
Strand 3	F	57	61	anti-parallel
Strand 4	F	34	38	anti-parallel
Strand 5	F	175	176	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	78	79	first strand
Strand 2	G	65	68	anti-parallel
Strand 3	G	58	61	anti-parallel
Strand 4	G	34	37	anti-parallel
Strand 5	G	175	176	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	77	79	first strand
Strand 2	E	65	68	anti-parallel
Strand 3	E	58	61	anti-parallel
Strand 4	E	34	37	anti-parallel
Strand 5	E	175	176	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9P9G

Analysis of interatomic Contacts of Structural Units in PDB entry:
9P9G