Analysis of interatomic Contacts of Structural Units in PDB entry:
9PB6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9PB6 entry

There are 4 chains in PDB entry 9PB6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 32	SER 1092
B	ASP 32	SER 1092
C	ASP 32	SER 1092
D	ASP 32	SER 1092

There are200 helices in PDB entry 9PB6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	32	41	Right-handed alpha
Helix 2	AA2	A	83	87	Right-handed alpha
Helix 3	AA3	A	117	128	Right-handed alpha
Helix 4	AA4	A	150	167	Right-handed alpha
Helix 5	AA5	A	178	195	Right-handed alpha
Helix 6	AA6	A	210	212	Right-handed 310
Helix 7	AA7	A	214	219	Right-handed 310
Helix 8	AA8	A	265	279	Right-handed alpha
Helix 9	AA9	A	300	313	Right-handed alpha
Helix 10	AB1	A	325	336	Right-handed alpha
Helix 11	AB2	A	341	353	Right-handed alpha
Helix 12	AB3	A	353	359	Right-handed alpha
Helix 13	AB4	A	361	377	Right-handed alpha
Helix 14	AB5	A	378	382	Right-handed 310
Helix 15	AB6	A	393	410	Right-handed alpha
Helix 16	AB7	A	411	414	Right-handed 310
Helix 17	AB8	A	416	428	Right-handed alpha
Helix 18	AB9	A	429	437	Right-handed alpha
Helix 19	AC1	A	450	459	Right-handed alpha
Helix 20	AC2	A	461	471	Right-handed alpha
Helix 21	AC3	A	474	479	Right-handed alpha
Helix 22	AC4	A	480	492	Right-handed alpha
Helix 23	AC5	A	493	508	Right-handed alpha
Helix 24	AC6	A	509	522	Right-handed alpha
Helix 25	AC7	A	550	562	Right-handed alpha
Helix 26	AC8	A	566	575	Right-handed alpha
Helix 27	AC9	A	577	594	Right-handed alpha
Helix 28	AD1	A	598	627	Right-handed alpha
Helix 29	AD2	A	628	637	Right-handed alpha
Helix 30	AD3	A	646	654	Right-handed alpha
Helix 31	AD4	A	656	661	Right-handed alpha
Helix 32	AD5	A	662	675	Right-handed alpha
Helix 33	AD6	A	682	692	Right-handed alpha
Helix 34	AD7	A	693	699	Right-handed 310
Helix 35	AD8	A	714	723	Right-handed alpha
Helix 36	AD9	A	724	749	Right-handed alpha
Helix 37	AE1	A	756	781	Right-handed alpha
Helix 38	AE2	A	782	786	Right-handed 310
Helix 39	AE3	A	787	809	Right-handed alpha
Helix 40	AE4	A	811	837	Right-handed alpha
Helix 41	AE5	A	838	840	Right-handed 310
Helix 42	AE6	A	843	880	Right-handed alpha
Helix 43	AE7	A	885	894	Right-handed alpha
Helix 44	AE8	A	894	902	Right-handed alpha
Helix 45	AE9	A	946	972	Right-handed alpha
Helix 46	AF1	A	978	995	Right-handed alpha
Helix 47	AF2	A	996	998	Right-handed 310
Helix 48	AF3	A	1005	1020	Right-handed alpha
Helix 49	AF4	A	1042	1066	Right-handed alpha
Helix 50	AF5	A	1067	1092	Right-handed alpha
Helix 51	AF6	B	33	41	Right-handed alpha
Helix 52	AF7	B	83	87	Right-handed alpha
Helix 53	AF8	B	117	128	Right-handed alpha
Helix 54	AF9	B	150	167	Right-handed alpha
Helix 55	AG1	B	178	195	Right-handed alpha
Helix 56	AG2	B	210	212	Right-handed 310
Helix 57	AG3	B	214	219	Right-handed 310
Helix 58	AG4	B	265	279	Right-handed alpha
Helix 59	AG5	B	300	313	Right-handed alpha
Helix 60	AG6	B	325	336	Right-handed alpha
Helix 61	AG7	B	341	353	Right-handed alpha
Helix 62	AG8	B	353	359	Right-handed alpha
Helix 63	AG9	B	361	377	Right-handed alpha
Helix 64	AH1	B	378	382	Right-handed 310
Helix 65	AH2	B	393	410	Right-handed alpha
Helix 66	AH3	B	411	414	Right-handed 310
Helix 67	AH4	B	416	428	Right-handed alpha
Helix 68	AH5	B	429	437	Right-handed alpha
Helix 69	AH6	B	450	459	Right-handed alpha
Helix 70	AH7	B	461	471	Right-handed alpha
Helix 71	AH8	B	474	479	Right-handed alpha
Helix 72	AH9	B	480	492	Right-handed alpha
Helix 73	AI1	B	493	508	Right-handed alpha
Helix 74	AI2	B	509	522	Right-handed alpha
Helix 75	AI3	B	550	562	Right-handed alpha
Helix 76	AI4	B	566	575	Right-handed alpha
Helix 77	AI5	B	577	594	Right-handed alpha
Helix 78	AI6	B	598	627	Right-handed alpha
Helix 79	AI7	B	628	637	Right-handed alpha
Helix 80	AI8	B	646	654	Right-handed alpha
Helix 81	AI9	B	656	661	Right-handed alpha
Helix 82	AJ1	B	662	675	Right-handed alpha
Helix 83	AJ2	B	682	692	Right-handed alpha
Helix 84	AJ3	B	693	699	Right-handed 310
Helix 85	AJ4	B	714	723	Right-handed alpha
Helix 86	AJ5	B	724	749	Right-handed alpha
Helix 87	AJ6	B	756	781	Right-handed alpha
Helix 88	AJ7	B	782	786	Right-handed 310
Helix 89	AJ8	B	787	809	Right-handed alpha
Helix 90	AJ9	B	811	837	Right-handed alpha
Helix 91	AK1	B	838	840	Right-handed 310
Helix 92	AK2	B	843	880	Right-handed alpha
Helix 93	AK3	B	885	894	Right-handed alpha
Helix 94	AK4	B	894	902	Right-handed alpha
Helix 95	AK5	B	946	972	Right-handed alpha
Helix 96	AK6	B	978	995	Right-handed alpha
Helix 97	AK7	B	996	998	Right-handed 310
Helix 98	AK8	B	1005	1020	Right-handed alpha
Helix 99	AK9	B	1042	1066	Right-handed alpha
Helix 100	AL1	B	1067	1092	Right-handed alpha
Helix 101	AL2	C	33	41	Right-handed alpha
Helix 102	AL3	C	83	87	Right-handed alpha
Helix 103	AL4	C	117	128	Right-handed alpha
Helix 104	AL5	C	150	167	Right-handed alpha
Helix 105	AL6	C	178	195	Right-handed alpha
Helix 106	AL7	C	210	212	Right-handed 310
Helix 107	AL8	C	214	219	Right-handed 310
Helix 108	AL9	C	265	279	Right-handed alpha
Helix 109	AM1	C	300	313	Right-handed alpha
Helix 110	AM2	C	325	336	Right-handed alpha
Helix 111	AM3	C	341	353	Right-handed alpha
Helix 112	AM4	C	353	359	Right-handed alpha
Helix 113	AM5	C	361	377	Right-handed alpha
Helix 114	AM6	C	378	382	Right-handed 310
Helix 115	AM7	C	393	410	Right-handed alpha
Helix 116	AM8	C	411	414	Right-handed 310
Helix 117	AM9	C	416	428	Right-handed alpha
Helix 118	AN1	C	429	437	Right-handed alpha
Helix 119	AN2	C	450	459	Right-handed alpha
Helix 120	AN3	C	461	471	Right-handed alpha
Helix 121	AN4	C	474	479	Right-handed alpha
Helix 122	AN5	C	480	492	Right-handed alpha
Helix 123	AN6	C	493	508	Right-handed alpha
Helix 124	AN7	C	509	522	Right-handed alpha
Helix 125	AN8	C	550	562	Right-handed alpha
Helix 126	AN9	C	566	575	Right-handed alpha
Helix 127	AO1	C	577	594	Right-handed alpha
Helix 128	AO2	C	598	627	Right-handed alpha
Helix 129	AO3	C	628	637	Right-handed alpha
Helix 130	AO4	C	646	654	Right-handed alpha
Helix 131	AO5	C	656	661	Right-handed alpha
Helix 132	AO6	C	662	675	Right-handed alpha
Helix 133	AO7	C	682	692	Right-handed alpha
Helix 134	AO8	C	693	699	Right-handed 310
Helix 135	AO9	C	714	723	Right-handed alpha
Helix 136	AP1	C	724	749	Right-handed alpha
Helix 137	AP2	C	756	781	Right-handed alpha
Helix 138	AP3	C	782	786	Right-handed 310
Helix 139	AP4	C	787	809	Right-handed alpha
Helix 140	AP5	C	811	837	Right-handed alpha
Helix 141	AP6	C	838	840	Right-handed 310
Helix 142	AP7	C	843	880	Right-handed alpha
Helix 143	AP8	C	885	894	Right-handed alpha
Helix 144	AP9	C	894	902	Right-handed alpha
Helix 145	AQ1	C	946	972	Right-handed alpha
Helix 146	AQ2	C	978	995	Right-handed alpha
Helix 147	AQ3	C	996	998	Right-handed 310
Helix 148	AQ4	C	1005	1020	Right-handed alpha
Helix 149	AQ5	C	1042	1066	Right-handed alpha
Helix 150	AQ6	C	1067	1092	Right-handed alpha
Helix 151	AQ7	D	33	41	Right-handed alpha
Helix 152	AQ8	D	83	87	Right-handed alpha
Helix 153	AQ9	D	117	128	Right-handed alpha
Helix 154	AR1	D	150	167	Right-handed alpha
Helix 155	AR2	D	178	195	Right-handed alpha
Helix 156	AR3	D	210	212	Right-handed 310
Helix 157	AR4	D	214	219	Right-handed 310
Helix 158	AR5	D	265	279	Right-handed alpha
Helix 159	AR6	D	300	313	Right-handed alpha
Helix 160	AR7	D	325	336	Right-handed alpha
Helix 161	AR8	D	341	353	Right-handed alpha
Helix 162	AR9	D	353	359	Right-handed alpha
Helix 163	AS1	D	361	377	Right-handed alpha
Helix 164	AS2	D	378	382	Right-handed 310
Helix 165	AS3	D	393	410	Right-handed alpha
Helix 166	AS4	D	411	414	Right-handed 310
Helix 167	AS5	D	416	428	Right-handed alpha
Helix 168	AS6	D	429	437	Right-handed alpha
Helix 169	AS7	D	450	459	Right-handed alpha
Helix 170	AS8	D	461	471	Right-handed alpha
Helix 171	AS9	D	474	479	Right-handed alpha
Helix 172	AT1	D	480	492	Right-handed alpha
Helix 173	AT2	D	493	508	Right-handed alpha
Helix 174	AT3	D	509	522	Right-handed alpha
Helix 175	AT4	D	550	562	Right-handed alpha
Helix 176	AT5	D	566	575	Right-handed alpha
Helix 177	AT6	D	577	594	Right-handed alpha
Helix 178	AT7	D	598	627	Right-handed alpha
Helix 179	AT8	D	628	637	Right-handed alpha
Helix 180	AT9	D	646	654	Right-handed alpha
Helix 181	AU1	D	656	661	Right-handed alpha
Helix 182	AU2	D	662	675	Right-handed alpha
Helix 183	AU3	D	682	692	Right-handed alpha
Helix 184	AU4	D	693	699	Right-handed 310
Helix 185	AU5	D	714	723	Right-handed alpha
Helix 186	AU6	D	724	749	Right-handed alpha
Helix 187	AU7	D	756	781	Right-handed alpha
Helix 188	AU8	D	782	786	Right-handed 310
Helix 189	AU9	D	787	809	Right-handed alpha
Helix 190	AV1	D	811	837	Right-handed alpha
Helix 191	AV2	D	838	840	Right-handed 310
Helix 192	AV3	D	843	880	Right-handed alpha
Helix 193	AV4	D	885	894	Right-handed alpha
Helix 194	AV5	D	894	902	Right-handed alpha
Helix 195	AV6	D	946	972	Right-handed alpha
Helix 196	AV7	D	978	995	Right-handed alpha
Helix 197	AV8	D	996	998	Right-handed 310
Helix 198	AV9	D	1005	1020	Right-handed alpha
Helix 199	AW1	D	1042	1066	Right-handed alpha
Helix 200	AW2	D	1067	1092	Right-handed alpha

There are 8 sheets in PDB entry 9PB6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	43	first strand
Strand 2	A	90	91	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	111	113	first strand
Strand 2	A	250	255	parallel
Strand 3	A	202	208	parallel
Strand 4	A	169	173	parallel
Strand 5	A	136	141	parallel
Strand 6	A	295	296	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	43	first strand
Strand 2	B	90	91	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	111	113	first strand
Strand 2	B	250	255	parallel
Strand 3	B	202	208	parallel
Strand 4	B	169	173	parallel
Strand 5	B	136	141	parallel
Strand 6	B	295	296	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	43	first strand
Strand 2	C	90	91	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	113	first strand
Strand 2	C	250	255	parallel
Strand 3	C	202	208	parallel
Strand 4	C	169	173	parallel
Strand 5	C	136	141	parallel
Strand 6	C	295	296	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	42	43	first strand
Strand 2	D	90	91	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	111	113	first strand
Strand 2	D	250	255	parallel
Strand 3	D	202	208	parallel
Strand 4	D	169	173	parallel
Strand 5	D	136	141	parallel
Strand 6	D	295	296	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9PB6

Analysis of interatomic Contacts of Structural Units in PDB entry:
9PB6