Analysis of interatomic Contacts of Structural Units in PDB entry:
9PB9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9PB9 entry

There are 12 chains in PDB entry 9PB9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ILE 208PRO 740
B
MET 1PRO 740
C
MET 1PRO 740
D
MET 1PRO 740
E
MET 1PRO 740
F
ASP 212PRO 740
G
THR 197SER 259
H
ALA 178SER 259
I
MET 1GLY 204
J
GLY 0THR 286
K
GLY 0GLN 288
L
GLY 0THR 286
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are231 helices in PDB entry 9PB9. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
214 219Right-handed alpha
Helix 2
AA2
A
227 234Right-handed alpha
Helix 3
AA3
A
241 249Right-handed alpha
Helix 4
AA4
A
266 277Right-handed alpha
Helix 5
AA5
A
286 290Right-handed 310
Helix 6
AA6
A
297 305Right-handed alpha
Helix 7
AA7
A
306 314Right-handed alpha
Helix 8
AA8
A
330 333Right-handed 310
Helix 9
AA9
A
347 359Right-handed alpha
Helix 10
AB1
A
399 418Right-handed alpha
Helix 11
AB2
A
425 433Right-handed alpha
Helix 12
AB3
A
437 440Right-handed 310
Helix 13
AB4
A
441 462Right-handed alpha
Helix 14
AB5
A
466 474Right-handed alpha
Helix 15
AB6
A
478 487Right-handed alpha
Helix 16
AB7
A
498 503Right-handed alpha
Helix 17
AB8
A
511 531Right-handed alpha
Helix 18
AB9
A
548 560Right-handed alpha
Helix 19
AC1
A
569 573Right-handed 310
Helix 20
AC2
A
577 593Right-handed alpha
Helix 21
AC3
A
604 609Right-handed alpha
Helix 22
AC4
A
619 630Right-handed alpha
Helix 23
AC5
A
648 655Right-handed alpha
Helix 24
AC6
A
672 684Right-handed alpha
Helix 25
AC7
A
687 698Right-handed alpha
Helix 26
AC8
A
706 718Right-handed alpha
Helix 27
AC9
A
725 736Right-handed alpha
Helix 28
AD1
B
13 19Right-handed alpha
Helix 29
AD2
B
63 71Right-handed alpha
Helix 30
AD3
B
86 91Right-handed alpha
Helix 31
AD4
B
103 107Right-handed 310
Helix 32
AD5
B
114 125Right-handed alpha
Helix 33
AD6
B
214 218Right-handed 310
Helix 34
AD7
B
223 235Right-handed alpha
Helix 35
AD8
B
236 239Right-handed 310
Helix 36
AD9
B
241 247Right-handed alpha
Helix 37
AE1
B
265 275Right-handed alpha
Helix 38
AE2
B
297 304Right-handed alpha
Helix 39
AE3
B
306 317Right-handed alpha
Helix 40
AE4
B
329 333Right-handed 310
Helix 41
AE5
B
345 359Right-handed alpha
Helix 42
AE6
B
399 410Right-handed alpha
Helix 43
AE7
B
412 417Right-handed alpha
Helix 44
AE8
B
425 433Right-handed alpha
Helix 45
AE9
B
437 455Right-handed alpha
Helix 46
AF1
B
469 473Right-handed 310
Helix 47
AF2
B
476 487Right-handed alpha
Helix 48
AF3
B
497 503Right-handed alpha
Helix 49
AF4
B
512 531Right-handed alpha
Helix 50
AF5
B
548 559Right-handed alpha
Helix 51
AF6
B
569 573Right-handed 310
Helix 52
AF7
B
577 593Right-handed alpha
Helix 53
AF8
B
604 609Right-handed alpha
Helix 54
AF9
B
619 630Right-handed alpha
Helix 55
AG1
B
648 655Right-handed alpha
Helix 56
AG2
B
672 684Right-handed alpha
Helix 57
AG3
B
687 699Right-handed alpha
Helix 58
AG4
B
707 718Right-handed alpha
Helix 59
AG5
B
719 720Right-handed 310
Helix 60
AG6
B
721 723Right-handed 310
Helix 61
AG7
B
724 737Right-handed alpha
Helix 62
AG8
C
13 20Right-handed alpha
Helix 63
AG9
C
63 71Right-handed alpha
Helix 64
AH1
C
86 91Right-handed alpha
Helix 65
AH2
C
114 125Right-handed alpha
Helix 66
AH3
C
214 219Right-handed alpha
Helix 67
AH4
C
223 235Right-handed alpha
Helix 68
AH5
C
241 249Right-handed alpha
Helix 69
AH6
C
266 274Right-handed alpha
Helix 70
AH7
C
297 304Right-handed alpha
Helix 71
AH8
C
306 317Right-handed alpha
Helix 72
AH9
C
318 320Right-handed 310
Helix 73
AI1
C
330 333Right-handed 310
Helix 74
AI2
C
348 359Right-handed alpha
Helix 75
AI3
C
399 412Right-handed alpha
Helix 76
AI4
C
413 417Right-handed 310
Helix 77
AI5
C
425 433Right-handed alpha
Helix 78
AI6
C
437 455Right-handed alpha
Helix 79
AI7
C
469 473Right-handed 310
Helix 80
AI8
C
476 487Right-handed alpha
Helix 81
AI9
C
497 503Right-handed alpha
Helix 82
AJ1
C
512 531Right-handed alpha
Helix 83
AJ2
C
548 559Right-handed alpha
Helix 84
AJ3
C
569 573Right-handed 310
Helix 85
AJ4
C
577 592Right-handed alpha
Helix 86
AJ5
C
604 609Right-handed alpha
Helix 87
AJ6
C
619 630Right-handed alpha
Helix 88
AJ7
C
648 655Right-handed alpha
Helix 89
AJ8
C
672 684Right-handed alpha
Helix 90
AJ9
C
688 699Right-handed alpha
Helix 91
AK1
C
706 718Right-handed alpha
Helix 92
AK2
C
725 736Right-handed alpha
Helix 93
AK3
D
15 19Right-handed 310
Helix 94
AK4
D
63 71Right-handed alpha
Helix 95
AK5
D
103 107Right-handed 310
Helix 96
AK6
D
114 125Right-handed alpha
Helix 97
AK7
D
214 219Right-handed alpha
Helix 98
AK8
D
223 236Right-handed alpha
Helix 99
AK9
D
241 249Right-handed alpha
Helix 100
AL1
D
265 277Right-handed alpha
Helix 101
AL2
D
297 306Right-handed alpha
Helix 102
AL3
D
307 313Right-handed alpha
Helix 103
AL4
D
329 333Right-handed 310
Helix 104
AL5
D
345 359Right-handed alpha
Helix 105
AL6
D
380 384Right-handed 310
Helix 106
AL7
D
399 410Right-handed alpha
Helix 107
AL8
D
411 418Right-handed alpha
Helix 108
AL9
D
425 433Right-handed alpha
Helix 109
AM1
D
437 454Right-handed alpha
Helix 110
AM2
D
469 473Right-handed 310
Helix 111
AM3
D
476 487Right-handed alpha
Helix 112
AM4
D
498 503Right-handed alpha
Helix 113
AM5
D
512 531Right-handed alpha
Helix 114
AM6
D
548 559Right-handed alpha
Helix 115
AM7
D
569 573Right-handed 310
Helix 116
AM8
D
577 592Right-handed alpha
Helix 117
AM9
D
604 609Right-handed alpha
Helix 118
AN1
D
620 630Right-handed alpha
Helix 119
AN2
D
648 655Right-handed alpha
Helix 120
AN3
D
672 684Right-handed alpha
Helix 121
AN4
D
687 700Right-handed alpha
Helix 122
AN5
D
707 719Right-handed alpha
Helix 123
AN6
D
721 724Right-handed 310
Helix 124
AN7
D
725 737Right-handed alpha
Helix 125
AN8
E
15 19Right-handed 310
Helix 126
AN9
E
63 71Right-handed alpha
Helix 127
AO1
E
114 125Right-handed alpha
Helix 128
AO2
E
224 235Right-handed alpha
Helix 129
AO3
E
235 240Right-handed alpha
Helix 130
AO4
E
241 249Right-handed alpha
Helix 131
AO5
E
265 275Right-handed alpha
Helix 132
AO6
E
297 304Right-handed alpha
Helix 133
AO7
E
307 316Right-handed alpha
Helix 134
AO8
E
345 359Right-handed alpha
Helix 135
AO9
E
375 379Right-handed 310
Helix 136
AP1
E
380 384Right-handed 310
Helix 137
AP2
E
399 410Right-handed alpha
Helix 138
AP3
E
411 417Right-handed alpha
Helix 139
AP4
E
425 433Right-handed alpha
Helix 140
AP5
E
439 454Right-handed alpha
Helix 141
AP6
E
476 487Right-handed alpha
Helix 142
AP7
E
498 503Right-handed alpha
Helix 143
AP8
E
511 530Right-handed alpha
Helix 144
AP9
E
548 560Right-handed alpha
Helix 145
AQ1
E
569 573Right-handed 310
Helix 146
AQ2
E
577 591Right-handed alpha
Helix 147
AQ3
E
604 609Right-handed alpha
Helix 148
AQ4
E
619 631Right-handed alpha
Helix 149
AQ5
E
648 655Right-handed alpha
Helix 150
AQ6
E
672 684Right-handed alpha
Helix 151
AQ7
E
687 699Right-handed alpha
Helix 152
AQ8
E
706 718Right-handed alpha
Helix 153
AQ9
E
724 736Right-handed alpha
Helix 154
AR1
F
223 235Right-handed alpha
Helix 155
AR2
F
235 240Right-handed alpha
Helix 156
AR3
F
265 277Right-handed alpha
Helix 157
AR4
F
296 304Right-handed alpha
Helix 158
AR5
F
306 317Right-handed alpha
Helix 159
AR6
F
318 320Right-handed 310
Helix 160
AR7
F
330 333Right-handed 310
Helix 161
AR8
F
339 343Right-handed 310
Helix 162
AR9
F
345 359Right-handed alpha
Helix 163
AS1
F
375 379Right-handed 310
Helix 164
AS2
F
380 385Right-handed 310
Helix 165
AS3
F
399 417Right-handed alpha
Helix 166
AS4
F
425 433Right-handed alpha
Helix 167
AS5
F
437 455Right-handed alpha
Helix 168
AS6
F
476 487Right-handed alpha
Helix 169
AS7
F
498 503Right-handed 310
Helix 170
AS8
F
512 531Right-handed alpha
Helix 171
AS9
F
549 561Right-handed alpha
Helix 172
AT1
F
569 573Right-handed 310
Helix 173
AT2
F
577 593Right-handed alpha
Helix 174
AT3
F
604 609Right-handed alpha
Helix 175
AT4
F
619 630Right-handed alpha
Helix 176
AT5
F
648 653Right-handed alpha
Helix 177
AT6
F
672 684Right-handed alpha
Helix 178
AT7
F
687 699Right-handed alpha
Helix 179
AT8
F
706 717Right-handed alpha
Helix 180
AT9
F
721 737Right-handed alpha
Helix 181
AU1
G
198 259Right-handed alpha
Helix 182
AU2
H
197 201Right-handed 310
Helix 183
AU3
H
202 259Right-handed alpha
Helix 184
AU4
I
2 82Right-handed alpha
Helix 185
AU5
I
139 202Right-handed alpha
Helix 186
AU6
J
1 32Right-handed alpha
Helix 187
AU7
J
35 55Right-handed alpha
Helix 188
AU8
J
57 74Right-handed alpha
Helix 189
AU9
J
77 96Right-handed alpha
Helix 190
AV1
J
96 115Right-handed alpha
Helix 191
AV2
J
116 135Right-handed alpha
Helix 192
AV3
J
137 156Right-handed alpha
Helix 193
AV4
J
160 175Right-handed alpha
Helix 194
AV5
J
178 194Right-handed alpha
Helix 195
AV6
J
198 213Right-handed alpha
Helix 196
AV7
J
217 232Right-handed alpha
Helix 197
AV8
J
233 237Right-handed 310
Helix 198
AV9
J
238 252Right-handed alpha
Helix 199
AW1
J
255 270Right-handed alpha
Helix 200
AW2
J
273 286Right-handed alpha
Helix 201
AW3
K
1 23Right-handed alpha
Helix 202
AW4
K
39 55Right-handed alpha
Helix 203
AW5
K
60 74Right-handed alpha
Helix 204
AW6
K
78 96Right-handed alpha
Helix 205
AW7
K
96 115Right-handed alpha
Helix 206
AW8
K
116 134Right-handed alpha
Helix 207
AW9
K
138 155Right-handed alpha
Helix 208
AX1
K
157 176Right-handed alpha
Helix 209
AX2
K
177 194Right-handed alpha
Helix 210
AX3
K
198 217Right-handed alpha
Helix 211
AX4
K
217 232Right-handed alpha
Helix 212
AX5
K
232 238Right-handed alpha
Helix 213
AX6
K
238 253Right-handed alpha
Helix 214
AX7
K
255 270Right-handed alpha
Helix 215
AX8
K
274 286Right-handed alpha
Helix 216
AX9
L
1 23Right-handed alpha
Helix 217
AY1
L
37 56Right-handed alpha
Helix 218
AY2
L
57 75Right-handed alpha
Helix 219
AY3
L
78 93Right-handed alpha
Helix 220
AY4
L
96 115Right-handed alpha
Helix 221
AY5
L
116 135Right-handed alpha
Helix 222
AY6
L
137 155Right-handed alpha
Helix 223
AY7
L
157 175Right-handed alpha
Helix 224
AY8
L
177 195Right-handed alpha
Helix 225
AY9
L
198 200Right-handed 310
Helix 226
AZ1
L
201 217Right-handed alpha
Helix 227
AZ2
L
218 232Right-handed alpha
Helix 228
AZ3
L
233 237Right-handed 310
Helix 229
AZ4
L
238 253Right-handed alpha
Helix 230
AZ5
L
255 270Right-handed alpha
Helix 231
AZ6
L
273 286Right-handed alpha
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There are 29 sheets in PDB entry 9PB9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
283 284first strand
Strand 2
A
323 328parallel
Strand 3
A
367 373parallel
Strand 4
A
256 259parallel
Strand 5
A
392 394parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
566 568first strand
Strand 2
A
600 602parallel
Strand 3
A
640 646parallel
Strand 4
A
536 542parallel
Strand 5
A
664 666parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
4 10first strand
Strand 2
B
59 62parallel
Strand 3
B
22 24anti-parallel
Strand 4
B
43 51parallel
Strand 5
B
34 40anti-parallel
Strand 6
B
77 82anti-parallel
Strand 7
B
4 10anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
135 139first strand
Strand 2
B
144 153anti-parallel
Strand 3
B
94 101anti-parallel
Strand 4
B
182 187parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
111 113first strand
Strand 2
B
194 196parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
128 131first strand
Strand 2
B
174 177anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
283 286first strand
Strand 2
B
323 328parallel
Strand 3
B
367 373parallel
Strand 4
B
255 259parallel
Strand 5
B
392 394parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
566 568first strand
Strand 2
B
600 602parallel
Strand 3
B
642 646parallel
Strand 4
B
538 542parallel
Strand 5
B
664 666parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
4 10first strand
Strand 2
C
59 62parallel
Strand 3
C
22 24anti-parallel
Strand 4
C
43 51parallel
Strand 5
C
34 40anti-parallel
Strand 6
C
77 82anti-parallel
Strand 7
C
4 10anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
135 140first strand
Strand 2
C
143 153anti-parallel
Strand 3
C
94 101anti-parallel
Strand 4
C
182 187parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
112 113first strand
Strand 2
C
195 196parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
129 131first strand
Strand 2
C
174 176anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
283 286first strand
Strand 2
C
324 328parallel
Strand 3
C
368 373parallel
Strand 4
C
256 259parallel
Strand 5
C
391 394parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
564 568first strand
Strand 2
C
597 602parallel
Strand 3
C
639 646parallel
Strand 4
C
536 542parallel
Strand 5
C
664 666parallel
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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
4 10first strand
Strand 2
D
59 62parallel
Strand 3
D
21 24anti-parallel
Strand 4
D
43 51parallel
Strand 5
D
34 40anti-parallel
Strand 6
D
77 82anti-parallel
Strand 7
D
4 10anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
135 136first strand
Strand 2
D
146 154anti-parallel
Strand 3
D
92 100anti-parallel
Strand 4
D
182 187parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
112 113first strand
Strand 2
D
195 196parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
129 131first strand
Strand 2
D
174 176anti-parallel
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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
283 286first strand
Strand 2
D
323 328parallel
Strand 3
D
367 373parallel
Strand 4
D
256 259parallel
Strand 5
D
391 394parallel
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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
566 568first strand
Strand 2
D
600 602parallel
Strand 3
D
640 646parallel
Strand 4
D
536 542parallel
Strand 5
D
664 666parallel
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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
4 10first strand
Strand 2
E
59 62parallel
Strand 3
E
22 24anti-parallel
Strand 4
E
45 51parallel
Strand 5
E
34 38anti-parallel
Strand 6
E
78 82anti-parallel
Strand 7
E
4 10anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
135 136first strand
Strand 2
E
145 154anti-parallel
Strand 3
E
92 101anti-parallel
Strand 4
E
182 187parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
112 113first strand
Strand 2
E
195 196parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
129 131first strand
Strand 2
E
174 176anti-parallel
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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
283 285first strand
Strand 2
E
323 327parallel
Strand 3
E
367 373parallel
Strand 4
E
256 259parallel
Strand 5
E
391 394parallel
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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
457 459first strand
Strand 2
E
463 465anti-parallel
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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
564 568first strand
Strand 2
E
598 602parallel
Strand 3
E
640 645parallel
Strand 4
E
536 542parallel
Strand 5
E
663 666parallel
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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
283 286first strand
Strand 2
F
324 328parallel
Strand 3
F
368 373parallel
Strand 4
F
255 259parallel
Strand 5
F
391 394parallel
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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
564 568first strand
Strand 2
F
597 602parallel
Strand 3
F
639 646parallel
Strand 4
F
536 542parallel
Strand 5
F
663 666parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il