Analysis of interatomic Contacts of Structural Units in PDB entry:
9PE3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9PE3 entry

There are 2 chains in PDB entry 9PE3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 135THR 1857
G
 VAL 80GLY 143
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 9PE3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
135 143Right-handed alpha
Helix 2
AA2
A
148 153Right-handed alpha
Helix 3
AA3
A
160 176Right-handed alpha
Helix 4
AA4
A
178 200Right-handed alpha
Helix 5
AA5
A
201 214Right-handed alpha
Helix 6
AA6
A
219 228Right-handed alpha
Helix 7
AA7
A
232 243Right-handed alpha
Helix 8
AA8
A
268 276Right-handed alpha
Helix 9
AA9
A
281 295Right-handed alpha
Helix 10
AB1
A
297 315Right-handed alpha
Helix 11
AB2
A
317 320Right-handed 310
Helix 12
AB3
A
321 338Right-handed alpha
Helix 13
AB4
A
338 344Right-handed alpha
Helix 14
AB5
A
351 357Right-handed alpha
Helix 15
AB6
A
357 369Right-handed alpha
Helix 16
AB7
A
389 396Right-handed alpha
Helix 17
AB8
A
399 405Right-handed alpha
Helix 18
AB9
A
421 426Right-handed alpha
Helix 19
AC1
A
427 429Right-handed 310
Helix 20
AC2
A
445 452Right-handed alpha
Helix 21
AC3
A
452 471Right-handed alpha
Helix 22
AC4
A
488 518Right-handed alpha
Helix 23
AC5
A
526 552Right-handed alpha
Helix 24
AC6
A
557 583Right-handed alpha
Helix 25
AC7
A
615 640Right-handed alpha
Helix 26
AC8
A
644 654Right-handed alpha
Helix 27
AC9
A
666 711Right-handed alpha
Helix 28
AD1
A
718 733Right-handed alpha
Helix 29
AD2
A
736 741Right-handed alpha
Helix 30
AD3
A
745 764Right-handed alpha
Helix 31
AD4
A
768 776Right-handed alpha
Helix 32
AD5
A
793 798Right-handed alpha
Helix 33
AD6
A
813 828Right-handed alpha
Helix 34
AD7
A
835 839Right-handed 310
Helix 35
AD8
A
856 861Right-handed alpha
Helix 36
AD9
A
864 868Right-handed 310
Helix 37
AE1
A
871 880Right-handed alpha
Helix 38
AE2
A
880 893Right-handed alpha
Helix 39
AE3
A
934 947Right-handed alpha
Helix 40
AE4
A
949 972Right-handed alpha
Helix 41
AE5
A
972 980Right-handed alpha
Helix 42
AE6
A
982 997Right-handed alpha
Helix 43
AE7
A
1011 1025Right-handed alpha
Helix 44
AE8
A
1081 1091Right-handed alpha
Helix 45
AE9
A
1108 1114Right-handed alpha
Helix 46
AF1
A
1114 1121Right-handed alpha
Helix 47
AF2
A
1163 1188Right-handed alpha
Helix 48
AF3
A
1201 1208Right-handed alpha
Helix 49
AF4
A
1220 1232Right-handed alpha
Helix 50
AF5
A
1251 1271Right-handed alpha
Helix 51
AF6
A
1272 1282Right-handed alpha
Helix 52
AF7
A
1283 1294Right-handed alpha
Helix 53
AF8
A
1294 1325Right-handed alpha
Helix 54
AF9
A
1348 1353Right-handed alpha
Helix 55
AG1
A
1353 1369Right-handed alpha
Helix 56
AG2
A
1370 1381Right-handed alpha
Helix 57
AG3
A
1382 1397Right-handed alpha
Helix 58
AG4
A
1397 1419Right-handed alpha
Helix 59
AG5
A
1437 1447Right-handed alpha
Helix 60
AG6
A
1449 1467Right-handed alpha
Helix 61
AG7
A
1471 1490Right-handed alpha
Helix 62
AG8
A
1495 1512Right-handed alpha
Helix 63
AG9
A
1521 1532Right-handed alpha
Helix 64
AH1
A
1555 1584Right-handed alpha
Helix 65
AH2
A
1591 1595Right-handed 310
Helix 66
AH3
A
1598 1625Right-handed alpha
Helix 67
AH4
A
1638 1665Right-handed alpha
Helix 68
AH5
A
1669 1695Right-handed alpha
Helix 69
AH6
A
1725 1754Right-handed alpha
Helix 70
AH7
A
1754 1760Right-handed alpha
Helix 71
AH8
A
1762 1773Right-handed alpha
Helix 72
AH9
A
1786 1825Right-handed alpha
Helix 73
AI1
A
1852 1857Right-handed alpha
Helix 74
AI2
G
104 118Right-handed alpha
Helix 75
AI3
G
119 125Right-handed alpha
Helix 76
AI4
G
127 132Right-handed alpha
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There are 3 sheets in PDB entry 9PE3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 373first strand
Strand 2
A
376 379anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
778 781first strand
Strand 2
A
788 791anti-parallel
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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1068 1072first strand
Strand 2
A
1046 1053anti-parallel
Strand 3
A
1029 1036anti-parallel
Strand 4
A
998 1004parallel
Strand 5
A
842 848parallel
Strand 6
A
1097 1100parallel
Strand 7
A
1198 1200anti-parallel
Strand 8
A
1148 1158anti-parallel
Strand 9
A
1235 1247parallel
Strand 10
A
1105 1106anti-parallel
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