Analysis of interatomic Contacts of Structural Units in PDB entry:
9PE5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9PE5 entry

There is 1 chain in PDB entry 9PE5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 137MET 1855
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 9PE5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
137 143Right-handed alpha
Helix 2
AA2
A
148 154Right-handed alpha
Helix 3
AA3
A
160 176Right-handed alpha
Helix 4
AA4
A
178 198Right-handed alpha
Helix 5
AA5
A
201 214Right-handed alpha
Helix 6
AA6
A
219 229Right-handed alpha
Helix 7
AA7
A
232 245Right-handed alpha
Helix 8
AA8
A
269 277Right-handed alpha
Helix 9
AA9
A
281 296Right-handed alpha
Helix 10
AB1
A
297 314Right-handed alpha
Helix 11
AB2
A
315 320Right-handed 310
Helix 12
AB3
A
321 338Right-handed alpha
Helix 13
AB4
A
338 344Right-handed alpha
Helix 14
AB5
A
351 357Right-handed alpha
Helix 15
AB6
A
357 369Right-handed alpha
Helix 16
AB7
A
383 387Right-handed 310
Helix 17
AB8
A
389 397Right-handed alpha
Helix 18
AB9
A
399 404Right-handed alpha
Helix 19
AC1
A
413 417Right-handed 310
Helix 20
AC2
A
422 429Right-handed 310
Helix 21
AC3
A
430 435Right-handed alpha
Helix 22
AC4
A
443 452Right-handed alpha
Helix 23
AC5
A
452 470Right-handed alpha
Helix 24
AC6
A
471 475Right-handed 310
Helix 25
AC7
A
488 515Right-handed alpha
Helix 26
AC8
A
526 553Right-handed alpha
Helix 27
AC9
A
561 583Right-handed alpha
Helix 28
AD1
A
590 594Right-handed 310
Helix 29
AD2
A
615 640Right-handed alpha
Helix 30
AD3
A
640 654Right-handed alpha
Helix 31
AD4
A
671 710Right-handed alpha
Helix 32
AD5
A
718 734Right-handed alpha
Helix 33
AD6
A
745 764Right-handed alpha
Helix 34
AD7
A
768 773Right-handed alpha
Helix 35
AD8
A
793 798Right-handed alpha
Helix 36
AD9
A
813 826Right-handed alpha
Helix 37
AE1
A
835 839Right-handed 310
Helix 38
AE2
A
856 861Right-handed alpha
Helix 39
AE3
A
871 880Right-handed alpha
Helix 40
AE4
A
880 893Right-handed alpha
Helix 41
AE5
A
935 947Right-handed alpha
Helix 42
AE6
A
949 971Right-handed alpha
Helix 43
AE7
A
972 980Right-handed alpha
Helix 44
AE8
A
982 997Right-handed alpha
Helix 45
AE9
A
1006 1010Right-handed 310
Helix 46
AF1
A
1011 1025Right-handed alpha
Helix 47
AF2
A
1082 1091Right-handed alpha
Helix 48
AF3
A
1108 1113Right-handed alpha
Helix 49
AF4
A
1114 1121Right-handed alpha
Helix 50
AF5
A
1177 1185Right-handed alpha
Helix 51
AF6
A
1201 1206Right-handed alpha
Helix 52
AF7
A
1220 1233Right-handed alpha
Helix 53
AF8
A
1266 1271Right-handed alpha
Helix 54
AF9
A
1272 1280Right-handed alpha
Helix 55
AG1
A
1283 1292Right-handed alpha
Helix 56
AG2
A
1294 1324Right-handed alpha
Helix 57
AG3
A
1348 1382Right-handed alpha
Helix 58
AG4
A
1383 1394Right-handed alpha
Helix 59
AG5
A
1411 1424Right-handed alpha
Helix 60
AG6
A
1437 1447Right-handed alpha
Helix 61
AG7
A
1451 1467Right-handed alpha
Helix 62
AG8
A
1471 1489Right-handed alpha
Helix 63
AG9
A
1495 1512Right-handed alpha
Helix 64
AH1
A
1521 1530Right-handed alpha
Helix 65
AH2
A
1555 1583Right-handed alpha
Helix 66
AH3
A
1598 1621Right-handed alpha
Helix 67
AH4
A
1640 1665Right-handed alpha
Helix 68
AH5
A
1668 1695Right-handed alpha
Helix 69
AH6
A
1726 1759Right-handed alpha
Helix 70
AH7
A
1762 1775Right-handed alpha
Helix 71
AH8
A
1786 1825Right-handed alpha
Helix 72
AH9
A
1834 1838Right-handed 310
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There are 3 sheets in PDB entry 9PE5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 373first strand
Strand 2
A
376 379anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
779 780first strand
Strand 2
A
789 790anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1068 1071first strand
Strand 2
A
1046 1053anti-parallel
Strand 3
A
1029 1036anti-parallel
Strand 4
A
998 1004parallel
Strand 5
A
842 848parallel
Strand 6
A
1097 1100parallel
Strand 7
A
1198 1200anti-parallel
Strand 8
A
1148 1153anti-parallel
Strand 9
A
1235 1239parallel
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