Analysis of interatomic Contacts of Structural Units in PDB entry:
9PF4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9PF4 entry

There is 1 chain in PDB entry 9PF4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 9PF4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 16Right-handed alpha
Helix 2
AA2
A
24 43Right-handed alpha
Helix 3
AA3
A
46 61Right-handed alpha
Helix 4
AA4
A
76 92Right-handed alpha
Helix 5
AA5
A
96 101Right-handed alpha
Helix 6
AA6
A
121 135Right-handed alpha
Helix 7
AA7
A
149 163Right-handed alpha
Helix 8
AA8
A
175 190Right-handed alpha
Helix 9
AA9
A
205 221Right-handed alpha
Helix 10
AB1
A
232 235Right-handed 310
Helix 11
AB2
A
236 248Right-handed alpha
Helix 12
AB3
A
263 274Right-handed alpha
Helix 13
AB4
A
294 304Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9PF4.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 168first strand
Strand 2
A
140 145parallel
Strand 3
A
194 199parallel
Strand 4
A
110 116parallel
Strand 5
A
224 230parallel
Strand 6
A
251 256parallel
Strand 7
A
278 282parallel
Strand 8
A
290 292anti-parallel
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