Analysis of interatomic Contacts of Structural Units in PDB entry:
9PFO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9PFO entry

There are 10 chains in PDB entry 9PFO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 182CYS 341
B
 PRO 5ALA 30
C
 T 1 G 15
D
 A 1 C 15
E
 SER 186CYS 341
F
 LYS 6GLY 33
G
 T 1 G 15
H
 A 1 C 15
I
 GLU 184CYS 341
J
 LYS 6GLU 19
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 9PFO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
184 205Right-handed alpha
Helix 2
AA2
A
208 221Right-handed alpha
Helix 3
AA3
A
225 234Right-handed alpha
Helix 4
AA4
A
238 258Right-handed alpha
Helix 5
AA5
A
289 303Right-handed alpha
Helix 6
AA6
A
307 318Right-handed alpha
Helix 7
AA7
A
321 340Right-handed alpha
Helix 8
AA8
B
16 30Right-handed alpha
Helix 9
AA9
E
187 205Right-handed alpha
Helix 10
AB1
E
208 221Right-handed alpha
Helix 11
AB2
E
225 234Right-handed alpha
Helix 12
AB3
E
238 257Right-handed alpha
Helix 13
AB4
E
289 303Right-handed alpha
Helix 14
AB5
E
307 319Right-handed alpha
Helix 15
AB6
E
321 340Right-handed alpha
Helix 16
AB7
F
16 32Right-handed alpha
Helix 17
AB8
I
187 205Right-handed alpha
Helix 18
AB9
I
208 221Right-handed alpha
Helix 19
AC1
I
225 234Right-handed alpha
Helix 20
AC2
I
238 258Right-handed alpha
Helix 21
AC3
I
289 303Right-handed alpha
Helix 22
AC4
I
307 319Right-handed alpha
Helix 23
AC5
I
321 340Right-handed alpha
Helix 24
AC6
J
16 30Right-handed alpha
Helix 25
AC7
M
187 205Right-handed alpha
Helix 26
AC8
M
208 221Right-handed alpha
Helix 27
AC9
M
225 235Right-handed alpha
Helix 28
AD1
M
238 259Right-handed alpha
Helix 29
AD2
M
289 303Right-handed alpha
Helix 30
AD3
M
307 318Right-handed alpha
Helix 31
AD4
M
321 340Right-handed alpha
Helix 32
AD5
N
16 31Right-handed alpha
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There are no sheets in PDB entry 9PFO
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