Analysis of interatomic Contacts of Structural Units in PDB entry:
9PIG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9PIG entry

There are 4 chains in PDB entry 9PIG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 132GLN 1021
D
 THR 139LEU 172
B
 GLU 132GLN 1021
C
 THR 139LEU 172
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 9PIG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
142 151Right-handed alpha
Helix 2
AA2
A
153 158Right-handed alpha
Helix 3
AA3
A
158 167Right-handed alpha
Helix 4
AA4
A
167 192Right-handed alpha
Helix 5
AA5
A
202 212Right-handed alpha
Helix 6
AA6
A
214 249Right-handed alpha
Helix 7
AA7
A
257 278Right-handed alpha
Helix 8
AA8
A
281 306Right-handed alpha
Helix 9
AA9
A
309 316Right-handed alpha
Helix 10
AB1
A
321 328Right-handed alpha
Helix 11
AB2
A
339 348Right-handed alpha
Helix 12
AB3
A
349 351Right-handed 310
Helix 13
AB4
A
357 361Right-handed 310
Helix 14
AB5
A
366 394Right-handed alpha
Helix 15
AB6
A
418 424Right-handed 310
Helix 16
AB7
A
427 433Right-handed alpha
Helix 17
AB8
A
445 450Right-handed alpha
Helix 18
AB9
A
453 485Right-handed alpha
Helix 19
AC1
A
492 497Right-handed 310
Helix 20
AC2
A
508 523Right-handed alpha
Helix 21
AC3
A
528 554Right-handed alpha
Helix 22
AC4
A
566 585Right-handed alpha
Helix 23
AC5
A
585 606Right-handed alpha
Helix 24
AC6
A
615 630Right-handed alpha
Helix 25
AC7
A
631 634Right-handed 310
Helix 26
AC8
A
637 641Right-handed 310
Helix 27
AC9
A
655 666Right-handed alpha
Helix 28
AD1
A
688 704Right-handed alpha
Helix 29
AD2
A
716 728Right-handed alpha
Helix 30
AD3
A
751 767Right-handed alpha
Helix 31
AD4
A
820 824Right-handed 310
Helix 32
AD5
A
841 851Right-handed alpha
Helix 33
AD6
A
872 886Right-handed alpha
Helix 34
AD7
A
904 913Right-handed alpha
Helix 35
AD8
A
915 919Right-handed 310
Helix 36
AD9
A
926 934Right-handed alpha
Helix 37
AE1
A
942 949Right-handed alpha
Helix 38
AE2
A
950 967Right-handed alpha
Helix 39
AE3
A
986 998Right-handed alpha
Helix 40
AE4
D
164 170Right-handed alpha
Helix 41
AE5
B
142 149Right-handed alpha
Helix 42
AE6
B
153 158Right-handed alpha
Helix 43
AE7
B
159 190Right-handed alpha
Helix 44
AE8
B
202 212Right-handed alpha
Helix 45
AE9
B
214 249Right-handed alpha
Helix 46
AF1
B
257 278Right-handed alpha
Helix 47
AF2
B
278 306Right-handed alpha
Helix 48
AF3
B
309 316Right-handed alpha
Helix 49
AF4
B
321 328Right-handed alpha
Helix 50
AF5
B
339 348Right-handed alpha
Helix 51
AF6
B
349 351Right-handed 310
Helix 52
AF7
B
366 393Right-handed alpha
Helix 53
AF8
B
394 396Right-handed 310
Helix 54
AF9
B
418 424Right-handed 310
Helix 55
AG1
B
427 433Right-handed alpha
Helix 56
AG2
B
445 450Right-handed alpha
Helix 57
AG3
B
453 485Right-handed alpha
Helix 58
AG4
B
492 496Right-handed 310
Helix 59
AG5
B
508 523Right-handed alpha
Helix 60
AG6
B
528 554Right-handed alpha
Helix 61
AG7
B
566 585Right-handed alpha
Helix 62
AG8
B
585 606Right-handed alpha
Helix 63
AG9
B
614 630Right-handed alpha
Helix 64
AH1
B
631 634Right-handed 310
Helix 65
AH2
B
637 641Right-handed 310
Helix 66
AH3
B
655 666Right-handed alpha
Helix 67
AH4
B
688 703Right-handed alpha
Helix 68
AH5
B
716 728Right-handed alpha
Helix 69
AH6
B
750 767Right-handed alpha
Helix 70
AH7
B
820 824Right-handed 310
Helix 71
AH8
B
841 851Right-handed alpha
Helix 72
AH9
B
852 857Right-handed 310
Helix 73
AI1
B
872 886Right-handed alpha
Helix 74
AI2
B
904 913Right-handed alpha
Helix 75
AI3
B
915 919Right-handed 310
Helix 76
AI4
B
926 934Right-handed alpha
Helix 77
AI5
B
942 949Right-handed alpha
Helix 78
AI6
B
950 967Right-handed alpha
Helix 79
AI7
B
986 999Right-handed alpha
Helix 80
AI8
C
164 170Right-handed alpha
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There are 2 sheets in PDB entry 9PIG. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
708 714first strand
Strand 2
A
672 679parallel
Strand 3
A
645 648parallel
Strand 4
A
737 741parallel
Strand 5
A
770 775parallel
Strand 6
A
1005 1009anti-parallel
Strand 7
A
972 976parallel
Strand 8
A
830 834parallel
Strand 9
A
860 866parallel
Strand 10
A
892 896parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
708 714first strand
Strand 2
B
672 679parallel
Strand 3
B
645 648parallel
Strand 4
B
737 741parallel
Strand 5
B
770 775parallel
Strand 6
B
1005 1009anti-parallel
Strand 7
B
972 976parallel
Strand 8
B
830 834parallel
Strand 9
B
860 865parallel
Strand 10
B
892 895parallel
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