Analysis of interatomic Contacts of Structural Units in PDB entry:
9PUL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9PUL entry

There are 4 chains in PDB entry 9PUL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA -1GLN 165
B
 ALA 0HIS 166
C
 ALA -1HIS 166
D
 MET 1ARG 164
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 9PUL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 26Right-handed alpha
Helix 2
AA2
A
65 75Right-handed alpha
Helix 3
AA3
A
86 92Right-handed alpha
Helix 4
AA4
A
92 105Right-handed alpha
Helix 5
AA5
A
126 138Right-handed alpha
Helix 6
AA6
A
151 165Right-handed alpha
Helix 7
AA7
B
15 26Right-handed alpha
Helix 8
AA8
B
69 74Right-handed alpha
Helix 9
AA9
B
86 92Right-handed alpha
Helix 10
AB1
B
92 104Right-handed alpha
Helix 11
AB2
B
126 138Right-handed alpha
Helix 12
AB3
B
151 165Right-handed alpha
Helix 13
AB4
C
15 26Right-handed alpha
Helix 14
AB5
C
66 75Right-handed alpha
Helix 15
AB6
C
86 92Right-handed alpha
Helix 16
AB7
C
92 105Right-handed alpha
Helix 17
AB8
C
126 138Right-handed alpha
Helix 18
AB9
C
151 165Right-handed alpha
Helix 19
AC1
D
15 25Right-handed alpha
Helix 20
AC2
D
66 75Right-handed alpha
Helix 21
AC3
D
86 92Right-handed alpha
Helix 22
AC4
D
92 104Right-handed alpha
Helix 23
AC5
D
126 138Right-handed alpha
Helix 24
AC6
D
151 165Right-handed alpha
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There are 5 sheets in PDB entry 9PUL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 45first strand
Strand 2
A
50 57anti-parallel
Strand 3
A
2 10parallel
Strand 4
A
77 83parallel
Strand 5
A
111 116parallel
Strand 6
A
141 143parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 46first strand
Strand 2
B
49 57anti-parallel
Strand 3
B
3 10parallel
Strand 4
B
77 83parallel
Strand 5
B
111 116parallel
Strand 6
B
141 143parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
41 46first strand
Strand 2
C
49 57anti-parallel
Strand 3
C
3 9parallel
Strand 4
C
77 83parallel
Strand 5
C
111 116parallel
Strand 6
C
141 143parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
40 46first strand
Strand 2
D
49 57anti-parallel
Strand 3
D
3 10parallel
Strand 4
D
77 83parallel
Strand 5
D
111 116parallel
Strand 6
D
141 143parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
2 3first strand
Strand 2
G
6 7anti-parallel
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