Analysis of interatomic Contacts of Structural Units in PDB entry:
9PVH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9PVH entry

There are 2 chains in PDB entry 9PVH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 60ALA 759
C
 MET 1THR 1230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are109 helices in PDB entry 9PVH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
60 71Right-handed alpha
Helix 2
AA2
A
83 95Right-handed alpha
Helix 3
AA3
A
98 117Right-handed alpha
Helix 4
AA4
A
127 153Right-handed alpha
Helix 5
AA5
A
153 158Right-handed alpha
Helix 6
AA6
A
169 182Right-handed alpha
Helix 7
AA7
A
185 206Right-handed alpha
Helix 8
AA8
A
212 224Right-handed alpha
Helix 9
AA9
A
226 231Right-handed alpha
Helix 10
AB1
A
231 251Right-handed alpha
Helix 11
AB2
A
252 254Right-handed 310
Helix 12
AB3
A
255 278Right-handed alpha
Helix 13
AB4
A
282 287Right-handed alpha
Helix 14
AB5
A
289 297Right-handed alpha
Helix 15
AB6
A
298 312Right-handed alpha
Helix 16
AB7
A
315 329Right-handed alpha
Helix 17
AB8
A
331 349Right-handed alpha
Helix 18
AB9
A
350 352Right-handed 310
Helix 19
AC1
A
355 359Right-handed 310
Helix 20
AC2
A
360 378Right-handed alpha
Helix 21
AC3
A
383 399Right-handed alpha
Helix 22
AC4
A
403 418Right-handed alpha
Helix 23
AC5
A
425 441Right-handed alpha
Helix 24
AC6
A
447 462Right-handed alpha
Helix 25
AC7
A
468 483Right-handed alpha
Helix 26
AC8
A
484 490Right-handed alpha
Helix 27
AC9
A
490 515Right-handed alpha
Helix 28
AD1
A
529 533Right-handed 310
Helix 29
AD2
A
544 562Right-handed alpha
Helix 30
AD3
A
593 601Right-handed alpha
Helix 31
AD4
A
608 616Right-handed alpha
Helix 32
AD5
A
620 633Right-handed alpha
Helix 33
AD6
A
671 675Right-handed 310
Helix 34
AD7
A
677 690Right-handed alpha
Helix 35
AD8
A
691 704Right-handed alpha
Helix 36
AD9
A
713 718Right-handed alpha
Helix 37
AE1
A
728 742Right-handed alpha
Helix 38
AE2
C
2 17Right-handed alpha
Helix 39
AE3
C
19 35Right-handed alpha
Helix 40
AE4
C
42 57Right-handed alpha
Helix 41
AE5
C
61 76Right-handed alpha
Helix 42
AE6
C
77 80Right-handed 310
Helix 43
AE7
C
81 96Right-handed alpha
Helix 44
AE8
C
99 116Right-handed alpha
Helix 45
AE9
C
124 144Right-handed alpha
Helix 46
AF1
C
148 164Right-handed alpha
Helix 47
AF2
C
169 171Right-handed 310
Helix 48
AF3
C
172 185Right-handed alpha
Helix 49
AF4
C
188 202Right-handed alpha
Helix 50
AF5
C
208 222Right-handed alpha
Helix 51
AF6
C
230 268Right-handed alpha
Helix 52
AF7
C
271 289Right-handed alpha
Helix 53
AF8
C
296 309Right-handed alpha
Helix 54
AF9
C
347 364Right-handed alpha
Helix 55
AG1
C
369 377Right-handed alpha
Helix 56
AG2
C
377 384Right-handed alpha
Helix 57
AG3
C
389 408Right-handed alpha
Helix 58
AG4
C
425 433Right-handed alpha
Helix 59
AG5
C
433 442Right-handed alpha
Helix 60
AG6
C
443 446Right-handed 310
Helix 61
AG7
C
449 467Right-handed alpha
Helix 62
AG8
C
471 473Right-handed 310
Helix 63
AG9
C
474 488Right-handed alpha
Helix 64
AH1
C
492 508Right-handed alpha
Helix 65
AH2
C
511 516Right-handed alpha
Helix 66
AH3
C
522 531Right-handed alpha
Helix 67
AH4
C
534 553Right-handed alpha
Helix 68
AH5
C
563 580Right-handed alpha
Helix 69
AH6
C
584 603Right-handed alpha
Helix 70
AH7
C
606 608Right-handed 310
Helix 71
AH8
C
609 623Right-handed alpha
Helix 72
AH9
C
626 640Right-handed alpha
Helix 73
AI1
C
646 663Right-handed alpha
Helix 74
AI2
C
665 684Right-handed alpha
Helix 75
AI3
C
688 697Right-handed alpha
Helix 76
AI4
C
708 725Right-handed alpha
Helix 77
AI5
C
727 731Right-handed 310
Helix 78
AI6
C
735 740Right-handed alpha
Helix 79
AI7
C
740 745Right-handed alpha
Helix 80
AI8
C
748 755Right-handed alpha
Helix 81
AI9
C
760 766Right-handed alpha
Helix 82
AJ1
C
775 782Right-handed alpha
Helix 83
AJ2
C
797 815Right-handed alpha
Helix 84
AJ3
C
815 830Right-handed alpha
Helix 85
AJ4
C
835 849Right-handed alpha
Helix 86
AJ5
C
850 852Right-handed 310
Helix 87
AJ6
C
853 859Right-handed alpha
Helix 88
AJ7
C
861 869Right-handed alpha
Helix 89
AJ8
C
874 887Right-handed alpha
Helix 90
AJ9
C
888 890Right-handed 310
Helix 91
AK1
C
892 907Right-handed alpha
Helix 92
AK2
C
910 924Right-handed alpha
Helix 93
AK3
C
930 947Right-handed alpha
Helix 94
AK4
C
949 965Right-handed alpha
Helix 95
AK5
C
967 982Right-handed alpha
Helix 96
AK6
C
983 998Right-handed alpha
Helix 97
AK7
C
1006 1017Right-handed alpha
Helix 98
AK8
C
1018 1022Right-handed 310
Helix 99
AK9
C
1024 1041Right-handed alpha
Helix 100
AL1
C
1049 1062Right-handed alpha
Helix 101
AL2
C
1064 1066Right-handed 310
Helix 102
AL3
C
1083 1099Right-handed alpha
Helix 103
AL4
C
1100 1105Right-handed 310
Helix 104
AL5
C
1106 1118Right-handed alpha
Helix 105
AL6
C
1121 1139Right-handed alpha
Helix 106
AL7
C
1139 1160Right-handed alpha
Helix 107
AL8
C
1167 1191Right-handed alpha
Helix 108
AL9
C
1197 1210Right-handed alpha
Helix 109
AM1
C
1210 1226Right-handed alpha
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There are 2 sheets in PDB entry 9PVH. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
575 576first strand
Strand 2
A
591 592anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1068 1070first strand
Strand 2
C
1079 1081anti-parallel
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