Analysis of interatomic Contacts of Structural Units in PDB entry:
9PWB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9PWB entry

There are 5 chains in PDB entry 9PWB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 9GLY 621
B
 LYS 26VAL 582
C
 SER 151PRO 161
M
 MET 1GLN 135
S
 MET 1LEU 141
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 89 helices in PDB entry 9PWB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 22Right-handed alpha
Helix 2
AA2
A
25 46Right-handed alpha
Helix 3
AA3
A
51 69Right-handed alpha
Helix 4
AA4
A
75 83Right-handed alpha
Helix 5
AA5
A
87 101Right-handed alpha
Helix 6
AA6
A
105 122Right-handed alpha
Helix 7
AA7
A
124 138Right-handed alpha
Helix 8
AA8
A
140 147Right-handed alpha
Helix 9
AA9
A
150 156Right-handed alpha
Helix 10
AB1
A
161 179Right-handed alpha
Helix 11
AB2
A
180 183Right-handed 310
Helix 12
AB3
A
188 195Right-handed alpha
Helix 13
AB4
A
196 198Right-handed 310
Helix 14
AB5
A
200 215Right-handed alpha
Helix 15
AB6
A
222 224Right-handed 310
Helix 16
AB7
A
225 238Right-handed alpha
Helix 17
AB8
A
254 266Right-handed alpha
Helix 18
AB9
A
273 292Right-handed alpha
Helix 19
AC1
A
299 321Right-handed alpha
Helix 20
AC2
A
323 338Right-handed alpha
Helix 21
AC3
A
342 357Right-handed alpha
Helix 22
AC4
A
362 368Right-handed alpha
Helix 23
AC5
A
369 379Right-handed alpha
Helix 24
AC6
A
382 396Right-handed alpha
Helix 25
AC7
A
401 414Right-handed alpha
Helix 26
AC8
A
420 435Right-handed alpha
Helix 27
AC9
A
438 453Right-handed alpha
Helix 28
AD1
A
458 473Right-handed alpha
Helix 29
AD2
A
475 487Right-handed alpha
Helix 30
AD3
A
493 508Right-handed alpha
Helix 31
AD4
A
509 512Right-handed 310
Helix 32
AD5
A
514 517Right-handed 310
Helix 33
AD6
A
518 531Right-handed alpha
Helix 34
AD7
A
534 552Right-handed alpha
Helix 35
AD8
A
555 564Right-handed alpha
Helix 36
AD9
A
565 570Right-handed alpha
Helix 37
AE1
A
573 590Right-handed alpha
Helix 38
AE2
A
593 599Right-handed alpha
Helix 39
AE3
A
610 620Right-handed alpha
Helix 40
AE4
B
27 44Right-handed alpha
Helix 41
AE5
B
47 49Right-handed 310
Helix 42
AE6
B
50 56Right-handed alpha
Helix 43
AE7
B
57 59Right-handed 310
Helix 44
AE8
B
62 74Right-handed alpha
Helix 45
AE9
B
81 83Right-handed 310
Helix 46
AF1
B
84 95Right-handed alpha
Helix 47
AF2
B
99 112Right-handed alpha
Helix 48
AF3
B
115 120Right-handed 310
Helix 49
AF4
B
122 130Right-handed alpha
Helix 50
AF5
B
134 150Right-handed alpha
Helix 51
AF6
B
155 162Right-handed alpha
Helix 52
AF7
B
163 170Right-handed alpha
Helix 53
AF8
B
173 189Right-handed alpha
Helix 54
AF9
B
200 211Right-handed alpha
Helix 55
AG1
B
215 227Right-handed alpha
Helix 56
AG2
B
233 245Right-handed alpha
Helix 57
AG3
B
246 249Right-handed 310
Helix 58
AG4
B
252 266Right-handed alpha
Helix 59
AG5
B
274 284Right-handed alpha
Helix 60
AG6
B
284 291Right-handed alpha
Helix 61
AG7
B
292 294Right-handed 310
Helix 62
AG8
B
295 313Right-handed alpha
Helix 63
AG9
B
321 325Right-handed 310
Helix 64
AH1
B
331 346Right-handed alpha
Helix 65
AH2
B
350 362Right-handed alpha
Helix 66
AH3
B
366 384Right-handed alpha
Helix 67
AH4
B
387 400Right-handed alpha
Helix 68
AH5
B
403 421Right-handed alpha
Helix 69
AH6
B
428 433Right-handed alpha
Helix 70
AH7
B
441 455Right-handed alpha
Helix 71
AH8
B
461 468Right-handed alpha
Helix 72
AH9
B
469 476Right-handed 310
Helix 73
AI1
B
477 495Right-handed alpha
Helix 74
AI2
B
499 512Right-handed alpha
Helix 75
AI3
B
516 533Right-handed alpha
Helix 76
AI4
B
533 542Right-handed alpha
Helix 77
AI5
B
556 565Right-handed alpha
Helix 78
AI6
B
570 575Right-handed alpha
Helix 79
AI7
B
577 581Right-handed 310
Helix 80
AI8
M
27 37Right-handed alpha
Helix 81
AI9
M
74 94Right-handed alpha
Helix 82
AJ1
M
97 104Right-handed alpha
Helix 83
AJ2
M
105 115Right-handed alpha
Helix 84
AJ3
M
128 133Right-handed alpha
Helix 85
AJ4
S
24 42Right-handed alpha
Helix 86
AJ5
S
76 95Right-handed alpha
Helix 87
AJ6
S
99 106Right-handed alpha
Helix 88
AJ7
S
106 117Right-handed alpha
Helix 89
AJ8
S
127 141Right-handed alpha
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There are 4 sheets in PDB entry 9PWB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
16 18first strand
Strand 2
M
5 7anti-parallel
Strand 3
M
63 69anti-parallel
Strand 4
M
54 60anti-parallel
Strand 5
M
47 49anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
116 117first strand
Strand 2
M
120 121anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
S
14 19first strand
Strand 2
S
2 9anti-parallel
Strand 3
S
65 71anti-parallel
Strand 4
S
55 62anti-parallel
Strand 5
S
49 52anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
S
118 119first strand
Strand 2
S
122 123anti-parallel
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