Analysis of interatomic Contacts of Structural Units in PDB entry:
9PZS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9PZS entry

There are 10 chains in PDB entry 9PZS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
D	SER 34	HIS 802
A	LYS 25	GLU 797
F	GLN 21	THR 139
G	ASP 21	ILE 134
B	LEU 34	CYS 800
C	LYS 25	GLU 797
J	VAL 21	VAL 138
K	ILE 22	GLU 129
H	GLN 21	THR 139
I	ASP 21	ILE 134

There are100 helices in PDB entry 9PZS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	D	46	53	Right-handed alpha
Helix 2	AA2	D	77	93	Right-handed alpha
Helix 3	AA3	D	106	119	Right-handed alpha
Helix 4	AA4	D	128	131	Right-handed 310
Helix 5	AA5	D	149	164	Right-handed alpha
Helix 6	AA6	D	178	191	Right-handed alpha
Helix 7	AA7	D	212	220	Right-handed alpha
Helix 8	AA8	D	221	223	Right-handed 310
Helix 9	AA9	D	233	248	Right-handed alpha
Helix 10	AB1	D	259	264	Right-handed alpha
Helix 11	AB2	D	288	311	Right-handed alpha
Helix 12	AB3	D	325	329	Right-handed 310
Helix 13	AB4	D	459	473	Right-handed alpha
Helix 14	AB5	D	495	504	Right-handed alpha
Helix 15	AB6	D	517	522	Right-handed 310
Helix 16	AB7	D	603	614	Right-handed alpha
Helix 17	AB8	D	626	656	Right-handed alpha
Helix 18	AB9	D	668	673	Right-handed alpha
Helix 19	AC1	D	689	697	Right-handed alpha
Helix 20	AC2	D	699	706	Right-handed alpha
Helix 21	AC3	D	707	710	Right-handed 310
Helix 22	AC4	D	713	723	Right-handed alpha
Helix 23	AC5	D	733	743	Right-handed alpha
Helix 24	AC6	D	772	787	Right-handed alpha
Helix 25	AC7	D	787	797	Right-handed alpha
Helix 26	AC8	A	35	50	Right-handed alpha
Helix 27	AC9	A	72	85	Right-handed alpha
Helix 28	AD1	A	104	113	Right-handed alpha
Helix 29	AD2	A	125	130	Right-handed 310
Helix 30	AD3	A	144	159	Right-handed alpha
Helix 31	AD4	A	169	186	Right-handed alpha
Helix 32	AD5	A	204	213	Right-handed alpha
Helix 33	AD6	A	224	239	Right-handed alpha
Helix 34	AD7	A	251	255	Right-handed 310
Helix 35	AD8	A	256	261	Right-handed alpha
Helix 36	AD9	A	276	297	Right-handed alpha
Helix 37	AE1	A	317	327	Right-handed alpha
Helix 38	AE2	A	458	470	Right-handed alpha
Helix 39	AE3	A	499	507	Right-handed alpha
Helix 40	AE4	A	520	527	Right-handed alpha
Helix 41	AE5	A	610	615	Right-handed alpha
Helix 42	AE6	A	628	657	Right-handed alpha
Helix 43	AE7	A	665	668	Right-handed 310
Helix 44	AE8	A	669	674	Right-handed alpha
Helix 45	AE9	A	687	696	Right-handed alpha
Helix 46	AF1	A	699	707	Right-handed alpha
Helix 47	AF2	A	713	723	Right-handed alpha
Helix 48	AF3	A	733	743	Right-handed alpha
Helix 49	AF4	A	769	782	Right-handed alpha
Helix 50	AF5	A	783	792	Right-handed alpha
Helix 51	AF6	F	107	111	Right-handed 310
Helix 52	AF7	G	105	109	Right-handed 310
Helix 53	AF8	G	118	122	Right-handed 310
Helix 54	AF9	B	78	91	Right-handed alpha
Helix 55	AG1	B	107	121	Right-handed alpha
Helix 56	AG2	B	128	133	Right-handed 310
Helix 57	AG3	B	150	165	Right-handed alpha
Helix 58	AG4	B	179	192	Right-handed alpha
Helix 59	AG5	B	214	221	Right-handed alpha
Helix 60	AG6	B	232	247	Right-handed alpha
Helix 61	AG7	B	287	310	Right-handed alpha
Helix 62	AG8	B	459	472	Right-handed alpha
Helix 63	AG9	B	494	501	Right-handed alpha
Helix 64	AH1	B	515	522	Right-handed alpha
Helix 65	AH2	B	603	614	Right-handed alpha
Helix 66	AH3	B	626	655	Right-handed alpha
Helix 67	AH4	B	667	671	Right-handed 310
Helix 68	AH5	B	672	676	Right-handed 310
Helix 69	AH6	B	688	698	Right-handed alpha
Helix 70	AH7	B	698	707	Right-handed alpha
Helix 71	AH8	B	712	723	Right-handed alpha
Helix 72	AH9	B	732	741	Right-handed alpha
Helix 73	AI1	B	770	784	Right-handed alpha
Helix 74	AI2	B	786	796	Right-handed alpha
Helix 75	AI3	C	35	50	Right-handed alpha
Helix 76	AI4	C	71	86	Right-handed alpha
Helix 77	AI5	C	104	113	Right-handed alpha
Helix 78	AI6	C	144	159	Right-handed alpha
Helix 79	AI7	C	169	188	Right-handed alpha
Helix 80	AI8	C	204	213	Right-handed alpha
Helix 81	AI9	C	224	238	Right-handed alpha
Helix 82	AJ1	C	251	255	Right-handed 310
Helix 83	AJ2	C	256	261	Right-handed alpha
Helix 84	AJ3	C	276	297	Right-handed alpha
Helix 85	AJ4	C	317	327	Right-handed alpha
Helix 86	AJ5	C	458	470	Right-handed alpha
Helix 87	AJ6	C	499	507	Right-handed alpha
Helix 88	AJ7	C	520	525	Right-handed alpha
Helix 89	AJ8	C	609	613	Right-handed 310
Helix 90	AJ9	C	628	657	Right-handed alpha
Helix 91	AK1	C	669	674	Right-handed alpha
Helix 92	AK2	C	687	696	Right-handed alpha
Helix 93	AK3	C	699	707	Right-handed alpha
Helix 94	AK4	C	713	723	Right-handed alpha
Helix 95	AK5	C	733	743	Right-handed alpha
Helix 96	AK6	C	769	782	Right-handed alpha
Helix 97	AK7	C	783	792	Right-handed alpha
Helix 98	AK8	H	107	111	Right-handed 310
Helix 99	AK9	I	105	109	Right-handed 310
Helix 100	AL1	I	118	122	Right-handed 310

There are 45 sheets in PDB entry 9PZS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	67	73	first strand
Strand 2	D	36	42	parallel
Strand 3	D	97	100	parallel
Strand 4	D	123	127	parallel
Strand 5	D	143	145	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	198	205	first strand
Strand 2	D	168	174	parallel
Strand 3	D	227	231	parallel
Strand 4	D	255	258	parallel
Strand 5	D	278	282	parallel
Strand 6	D	362	367	anti-parallel
Strand 7	D	373	380	anti-parallel
Strand 8	D	383	386	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	475	480	first strand
Strand 2	D	405	410	parallel
Strand 3	D	508	509	parallel
Strand 4	D	765	766	anti-parallel
Strand 5	D	524	525	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	418	421	first strand
Strand 2	D	451	458	anti-parallel
Strand 3	D	434	440	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	683	684	first strand
Strand 2	D	728	732	parallel
Strand 3	D	531	539	anti-parallel
Strand 4	D	748	750	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	683	684	first strand
Strand 2	D	728	732	parallel
Strand 3	D	531	539	anti-parallel
Strand 4	D	757	761	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	65	first strand
Strand 2	A	26	32	parallel
Strand 3	A	87	92	parallel
Strand 4	A	118	120	parallel
Strand 5	A	137	139	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	164	167	first strand
Strand 2	A	218	222	parallel
Strand 3	A	246	249	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	271	first strand
Strand 2	A	351	357	anti-parallel
Strand 3	A	360	367	anti-parallel
Strand 4	A	372	374	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	478	first strand
Strand 2	A	397	402	parallel
Strand 3	A	512	513	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	409	413	first strand
Strand 2	A	450	457	anti-parallel
Strand 3	A	434	439	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	488	490	first strand
Strand 2	A	495	497	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	517	518	first strand
Strand 2	A	758	759	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	681	682	first strand
Strand 2	A	728	732	parallel
Strand 3	A	536	543	anti-parallel
Strand 4	A	746	748	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	681	682	first strand
Strand 2	A	728	732	parallel
Strand 3	A	536	543	anti-parallel
Strand 4	A	753	756	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	23	26	first strand
Strand 2	F	38	45	anti-parallel
Strand 3	F	98	103	anti-parallel
Strand 4	F	88	93	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	30	31	first strand
Strand 2	F	136	139	parallel
Strand 3	F	112	122	anti-parallel
Strand 4	F	53	59	anti-parallel
Strand 5	F	65	72	anti-parallel
Strand 6	F	78	80	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	30	31	first strand
Strand 2	F	136	139	parallel
Strand 3	F	112	122	anti-parallel
Strand 4	F	125	132	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	24	27	first strand
Strand 2	G	39	45	anti-parallel
Strand 3	G	96	101	anti-parallel
Strand 4	G	88	93	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	30	32	first strand
Strand 2	G	130	133	parallel
Strand 3	G	111	116	anti-parallel
Strand 4	G	59	64	anti-parallel
Strand 5	G	71	75	anti-parallel
Strand 6	G	79	80	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	50	51	first strand
Strand 2	G	56	57	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	74	first strand
Strand 2	B	35	41	parallel
Strand 3	B	97	102	parallel
Strand 4	B	124	126	parallel

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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	205	first strand
Strand 2	B	169	174	parallel
Strand 3	B	226	230	parallel
Strand 4	B	254	257	parallel
Strand 5	B	277	280	parallel
Strand 6	B	362	366	anti-parallel
Strand 7	B	372	377	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	406	410	first strand
Strand 2	B	475	479	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	418	420	first strand
Strand 2	B	449	457	anti-parallel
Strand 3	B	434	441	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	523	524	first strand
Strand 2	B	764	765	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	530	531	first strand
Strand 2	B	759	760	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	533	537	first strand
Strand 2	B	727	731	anti-parallel
Strand 3	B	682	683	parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	65	first strand
Strand 2	C	26	32	parallel
Strand 3	C	87	92	parallel
Strand 4	C	118	120	parallel
Strand 5	C	137	139	parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	193	195	first strand
Strand 2	C	164	167	parallel
Strand 3	C	219	222	parallel
Strand 4	C	247	248	parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	267	271	first strand
Strand 2	C	351	356	anti-parallel
Strand 3	C	361	367	anti-parallel
Strand 4	C	372	374	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	478	first strand
Strand 2	C	397	402	parallel
Strand 3	C	512	518	parallel
Strand 4	C	758	762	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	409	412	first strand
Strand 2	C	450	457	anti-parallel
Strand 3	C	434	439	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	681	682	first strand
Strand 2	C	728	732	parallel
Strand 3	C	536	542	anti-parallel
Strand 4	C	747	748	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	681	682	first strand
Strand 2	C	728	732	parallel
Strand 3	C	536	542	anti-parallel
Strand 4	C	753	756	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	23	25	first strand
Strand 2	J	37	43	anti-parallel
Strand 3	J	97	102	anti-parallel
Strand 4	J	87	92	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	77	79	first strand
Strand 2	J	68	70	anti-parallel
Strand 3	J	53	57	anti-parallel
Strand 4	J	112	116	anti-parallel
Strand 5	J	134	135	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	24	27	first strand
Strand 2	K	40	45	anti-parallel
Strand 3	K	94	99	anti-parallel
Strand 4	K	86	91	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	77	78	first strand
Strand 2	K	69	73	anti-parallel
Strand 3	K	57	62	anti-parallel
Strand 4	K	109	114	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	23	26	first strand
Strand 2	H	38	45	anti-parallel
Strand 3	H	98	103	anti-parallel
Strand 4	H	88	93	anti-parallel

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There are 6 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	30	31	first strand
Strand 2	H	136	139	parallel
Strand 3	H	112	122	anti-parallel
Strand 4	H	53	59	anti-parallel
Strand 5	H	65	72	anti-parallel
Strand 6	H	78	80	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	30	31	first strand
Strand 2	H	136	139	parallel
Strand 3	H	112	122	anti-parallel
Strand 4	H	125	132	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	24	27	first strand
Strand 2	I	39	45	anti-parallel
Strand 3	I	96	101	anti-parallel
Strand 4	I	88	93	anti-parallel

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There are 6 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	30	32	first strand
Strand 2	I	130	133	parallel
Strand 3	I	111	116	anti-parallel
Strand 4	I	59	64	anti-parallel
Strand 5	I	71	75	anti-parallel
Strand 6	I	79	80	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	50	51	first strand
Strand 2	I	56	57	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9PZS

Analysis of interatomic Contacts of Structural Units in PDB entry:
9PZS