Analysis of interatomic Contacts of Structural Units in PDB entry:
9PZW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9PZW entry

There are 8 chains in PDB entry 9PZW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
J	GLN 20	VAL 138
K	ASP 21	GLU 129
A	LYS 25	LYS 838
B	PRO 31	TRP 837
C	LYS 25	LYS 838
D	PRO 31	TRP 837
L	GLN 20	VAL 138
M	ASP 21	GLU 129

There are106 helices in PDB entry 9PZW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	J	47	51	Right-handed 310
Helix 2	AA2	A	35	53	Right-handed alpha
Helix 3	AA3	A	70	84	Right-handed alpha
Helix 4	AA4	A	104	114	Right-handed alpha
Helix 5	AA5	A	126	130	Right-handed 310
Helix 6	AA6	A	146	158	Right-handed alpha
Helix 7	AA7	A	170	186	Right-handed alpha
Helix 8	AA8	A	204	213	Right-handed alpha
Helix 9	AA9	A	224	239	Right-handed alpha
Helix 10	AB1	A	251	254	Right-handed 310
Helix 11	AB2	A	255	261	Right-handed alpha
Helix 12	AB3	A	276	297	Right-handed alpha
Helix 13	AB4	A	317	327	Right-handed alpha
Helix 14	AB5	A	458	471	Right-handed alpha
Helix 15	AB6	A	499	507	Right-handed alpha
Helix 16	AB7	A	520	525	Right-handed alpha
Helix 17	AB8	A	561	584	Right-handed alpha
Helix 18	AB9	A	603	616	Right-handed alpha
Helix 19	AC1	A	628	657	Right-handed alpha
Helix 20	AC2	A	665	668	Right-handed 310
Helix 21	AC3	A	669	674	Right-handed alpha
Helix 22	AC4	A	687	696	Right-handed alpha
Helix 23	AC5	A	699	707	Right-handed alpha
Helix 24	AC6	A	713	723	Right-handed alpha
Helix 25	AC7	A	733	743	Right-handed alpha
Helix 26	AC8	A	769	782	Right-handed alpha
Helix 27	AC9	A	783	793	Right-handed alpha
Helix 28	AD1	A	812	838	Right-handed alpha
Helix 29	AD2	B	47	54	Right-handed alpha
Helix 30	AD3	B	80	90	Right-handed alpha
Helix 31	AD4	B	108	121	Right-handed alpha
Helix 32	AD5	B	150	165	Right-handed alpha
Helix 33	AD6	B	179	193	Right-handed alpha
Helix 34	AD7	B	214	221	Right-handed alpha
Helix 35	AD8	B	232	247	Right-handed alpha
Helix 36	AD9	B	287	310	Right-handed alpha
Helix 37	AE1	B	334	338	Right-handed 310
Helix 38	AE2	B	458	472	Right-handed alpha
Helix 39	AE3	B	494	502	Right-handed alpha
Helix 40	AE4	B	515	522	Right-handed alpha
Helix 41	AE5	B	556	579	Right-handed alpha
Helix 42	AE6	B	603	613	Right-handed alpha
Helix 43	AE7	B	624	655	Right-handed alpha
Helix 44	AE8	B	667	672	Right-handed alpha
Helix 45	AE9	B	688	698	Right-handed alpha
Helix 46	AF1	B	698	706	Right-handed alpha
Helix 47	AF2	B	707	709	Right-handed 310
Helix 48	AF3	B	712	723	Right-handed alpha
Helix 49	AF4	B	732	741	Right-handed alpha
Helix 50	AF5	B	771	784	Right-handed alpha
Helix 51	AF6	B	786	796	Right-handed alpha
Helix 52	AF7	B	813	836	Right-handed alpha
Helix 53	AF8	C	35	50	Right-handed alpha
Helix 54	AF9	C	70	82	Right-handed alpha
Helix 55	AG1	C	83	85	Right-handed 310
Helix 56	AG2	C	104	113	Right-handed alpha
Helix 57	AG3	C	126	130	Right-handed 310
Helix 58	AG4	C	146	159	Right-handed alpha
Helix 59	AG5	C	172	188	Right-handed alpha
Helix 60	AG6	C	204	213	Right-handed alpha
Helix 61	AG7	C	224	238	Right-handed alpha
Helix 62	AG8	C	251	255	Right-handed 310
Helix 63	AG9	C	256	261	Right-handed alpha
Helix 64	AH1	C	277	296	Right-handed alpha
Helix 65	AH2	C	317	327	Right-handed alpha
Helix 66	AH3	C	458	470	Right-handed alpha
Helix 67	AH4	C	499	507	Right-handed alpha
Helix 68	AH5	C	520	527	Right-handed alpha
Helix 69	AH6	C	561	584	Right-handed alpha
Helix 70	AH7	C	606	616	Right-handed alpha
Helix 71	AH8	C	628	657	Right-handed alpha
Helix 72	AH9	C	669	674	Right-handed alpha
Helix 73	AI1	C	687	696	Right-handed alpha
Helix 74	AI2	C	699	707	Right-handed alpha
Helix 75	AI3	C	713	723	Right-handed alpha
Helix 76	AI4	C	733	743	Right-handed alpha
Helix 77	AI5	C	769	782	Right-handed alpha
Helix 78	AI6	C	783	793	Right-handed alpha
Helix 79	AI7	C	813	838	Right-handed alpha
Helix 80	AI8	D	43	45	Right-handed 310
Helix 81	AI9	D	47	53	Right-handed alpha
Helix 82	AJ1	D	54	59	Right-handed alpha
Helix 83	AJ2	D	80	90	Right-handed alpha
Helix 84	AJ3	D	108	121	Right-handed alpha
Helix 85	AJ4	D	128	133	Right-handed 310
Helix 86	AJ5	D	150	166	Right-handed alpha
Helix 87	AJ6	D	179	193	Right-handed alpha
Helix 88	AJ7	D	214	220	Right-handed alpha
Helix 89	AJ8	D	232	246	Right-handed alpha
Helix 90	AJ9	D	287	310	Right-handed alpha
Helix 91	AK1	D	335	339	Right-handed 310
Helix 92	AK2	D	458	472	Right-handed alpha
Helix 93	AK3	D	495	502	Right-handed alpha
Helix 94	AK4	D	516	522	Right-handed alpha
Helix 95	AK5	D	556	579	Right-handed alpha
Helix 96	AK6	D	603	614	Right-handed alpha
Helix 97	AK7	D	624	655	Right-handed alpha
Helix 98	AK8	D	667	672	Right-handed alpha
Helix 99	AK9	D	689	698	Right-handed alpha
Helix 100	AL1	D	698	708	Right-handed alpha
Helix 101	AL2	D	712	723	Right-handed alpha
Helix 102	AL3	D	732	741	Right-handed alpha
Helix 103	AL4	D	771	784	Right-handed alpha
Helix 104	AL5	D	786	796	Right-handed alpha
Helix 105	AL6	D	813	837	Right-handed alpha
Helix 106	AL7	L	47	51	Right-handed 310

There are 44 sheets in PDB entry 9PZW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	23	24	first strand
Strand 2	J	38	43	anti-parallel
Strand 3	J	97	102	anti-parallel
Strand 4	J	87	92	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	29	30	first strand
Strand 2	J	134	137	parallel
Strand 3	J	112	117	anti-parallel
Strand 4	J	53	58	anti-parallel
Strand 5	J	68	70	anti-parallel
Strand 6	J	77	79	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	29	30	first strand
Strand 2	J	134	137	parallel
Strand 3	J	112	117	anti-parallel
Strand 4	J	129	130	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	24	27	first strand
Strand 2	K	39	45	anti-parallel
Strand 3	K	94	99	anti-parallel
Strand 4	K	86	91	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	30	31	first strand
Strand 2	K	127	128	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	50	51	first strand
Strand 2	K	54	55	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	77	78	first strand
Strand 2	K	69	73	anti-parallel
Strand 3	K	58	62	anti-parallel
Strand 4	K	109	113	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	65	first strand
Strand 2	A	26	32	parallel
Strand 3	A	87	92	parallel
Strand 4	A	118	120	parallel
Strand 5	A	137	139	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	193	196	first strand
Strand 2	A	163	167	parallel
Strand 3	A	218	220	parallel
Strand 4	A	246	248	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	271	first strand
Strand 2	A	351	356	anti-parallel
Strand 3	A	361	367	anti-parallel
Strand 4	A	372	374	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	476	478	first strand
Strand 2	A	400	402	parallel
Strand 3	A	512	518	parallel
Strand 4	A	753	761	anti-parallel
Strand 5	A	535	543	anti-parallel
Strand 6	A	728	732	anti-parallel
Strand 7	A	681	682	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	476	478	first strand
Strand 2	A	400	402	parallel
Strand 3	A	512	518	parallel
Strand 4	A	753	761	anti-parallel
Strand 5	A	535	543	anti-parallel
Strand 6	A	746	748	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	409	413	first strand
Strand 2	A	450	457	anti-parallel
Strand 3	A	434	439	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	487	489	first strand
Strand 2	A	496	498	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	74	first strand
Strand 2	B	37	41	parallel
Strand 3	B	98	100	parallel
Strand 4	B	124	126	parallel
Strand 5	B	144	145	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	200	first strand
Strand 2	B	169	174	parallel
Strand 3	B	204	205	parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	200	first strand
Strand 2	B	169	174	parallel
Strand 3	B	226	230	parallel
Strand 4	B	254	257	parallel
Strand 5	B	277	281	parallel
Strand 6	B	361	366	anti-parallel
Strand 7	B	372	377	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	342	343	first strand
Strand 2	B	346	347	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	474	479	first strand
Strand 2	B	405	410	parallel
Strand 3	B	507	508	parallel
Strand 4	B	764	765	anti-parallel
Strand 5	B	523	524	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	418	420	first strand
Strand 2	B	455	457	anti-parallel
Strand 3	B	434	435	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	438	441	first strand
Strand 2	B	449	452	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	530	531	first strand
Strand 2	B	759	760	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	682	683	first strand
Strand 2	B	727	731	parallel
Strand 3	B	533	537	anti-parallel
Strand 4	B	748	749	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	66	first strand
Strand 2	C	27	33	parallel
Strand 3	C	87	92	parallel
Strand 4	C	118	120	parallel
Strand 5	C	137	139	parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	193	195	first strand
Strand 2	C	164	167	parallel
Strand 3	C	218	222	parallel
Strand 4	C	246	248	parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	267	271	first strand
Strand 2	C	351	356	anti-parallel
Strand 3	C	361	363	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	365	368	first strand
Strand 2	C	371	374	anti-parallel

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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	477	478	first strand
Strand 2	C	400	402	parallel
Strand 3	C	512	518	parallel
Strand 4	C	753	761	anti-parallel
Strand 5	C	535	543	anti-parallel
Strand 6	C	728	732	anti-parallel
Strand 7	C	681	682	parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	477	478	first strand
Strand 2	C	400	402	parallel
Strand 3	C	512	518	parallel
Strand 4	C	753	761	anti-parallel
Strand 5	C	535	543	anti-parallel
Strand 6	C	746	748	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	409	413	first strand
Strand 2	C	450	457	anti-parallel
Strand 3	C	437	439	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	488	489	first strand
Strand 2	C	496	497	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	67	74	first strand
Strand 2	D	34	41	parallel
Strand 3	D	97	101	parallel
Strand 4	D	124	126	parallel
Strand 5	D	144	146	parallel

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There are 8 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	204	205	first strand
Strand 2	D	170	174	parallel
Strand 3	D	226	230	parallel
Strand 4	D	254	257	parallel
Strand 5	D	277	281	parallel
Strand 6	D	361	366	anti-parallel
Strand 7	D	372	379	anti-parallel
Strand 8	D	382	383	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	342	343	first strand
Strand 2	D	346	347	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	474	479	first strand
Strand 2	D	405	410	parallel
Strand 3	D	507	508	parallel
Strand 4	D	764	765	anti-parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	418	420	first strand
Strand 2	D	449	457	anti-parallel
Strand 3	D	434	441	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	728	731	first strand
Strand 2	D	533	537	anti-parallel
Strand 3	D	748	749	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	23	24	first strand
Strand 2	L	37	43	anti-parallel
Strand 3	L	97	102	anti-parallel
Strand 4	L	87	92	anti-parallel

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There are 6 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	29	30	first strand
Strand 2	L	134	137	parallel
Strand 3	L	112	117	anti-parallel
Strand 4	L	53	58	anti-parallel
Strand 5	L	68	70	anti-parallel
Strand 6	L	77	79	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	29	30	first strand
Strand 2	L	134	137	parallel
Strand 3	L	112	117	anti-parallel
Strand 4	L	129	130	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	26	27	first strand
Strand 2	M	39	44	anti-parallel
Strand 3	M	94	99	anti-parallel
Strand 4	M	86	91	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	30	32	first strand
Strand 2	M	127	129	parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	50	51	first strand
Strand 2	M	54	55	anti-parallel

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There are 5 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	77	78	first strand
Strand 2	M	69	73	anti-parallel
Strand 3	M	58	62	anti-parallel
Strand 4	M	109	114	anti-parallel
Strand 5	M	121	122	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9PZW

Analysis of interatomic Contacts of Structural Units in PDB entry:
9PZW