Analysis of interatomic Contacts of Structural Units in PDB entry:
9Q3G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9Q3G entry

There are 2 chains in PDB entry 9Q3G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 22ALA 857
B
 N 1 N 8
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 9Q3G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
65 80Right-handed alpha
Helix 2
AA2
A
80 85Right-handed alpha
Helix 3
AA3
A
138 148Right-handed alpha
Helix 4
AA4
A
154 164Right-handed alpha
Helix 5
AA5
A
165 172Right-handed alpha
Helix 6
AA6
A
227 237Right-handed alpha
Helix 7
AA7
A
249 260Right-handed alpha
Helix 8
AA8
A
306 314Right-handed alpha
Helix 9
AA9
A
355 367Right-handed alpha
Helix 10
AB1
A
369 385Right-handed alpha
Helix 11
AB2
A
386 388Right-handed 310
Helix 12
AB3
A
389 396Right-handed alpha
Helix 13
AB4
A
456 460Right-handed 310
Helix 14
AB5
A
461 480Right-handed alpha
Helix 15
AB6
A
495 497Right-handed 310
Helix 16
AB7
A
498 510Right-handed alpha
Helix 17
AB8
A
525 537Right-handed alpha
Helix 18
AB9
A
547 552Right-handed alpha
Helix 19
AC1
A
554 570Right-handed alpha
Helix 20
AC2
A
578 581Right-handed 310
Helix 21
AC3
A
583 587Right-handed 310
Helix 22
AC4
A
639 656Right-handed alpha
Helix 23
AC5
A
673 693Right-handed alpha
Helix 24
AC6
A
773 785Right-handed alpha
Helix 25
AC7
A
798 815Right-handed alpha
Helix 26
AC8
A
836 845Right-handed alpha
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There are 6 sheets in PDB entry 9Q3G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
623 630first strand
Strand 2
A
608 615anti-parallel
Strand 3
A
590 597anti-parallel
Strand 4
A
661 666parallel
Strand 5
A
699 706parallel
Strand 6
A
761 767anti-parallel
Strand 7
A
745 749anti-parallel
Strand 8
A
732 734anti-parallel
Strand 9
A
404 410anti-parallel
Strand 10
A
34 40anti-parallel
Strand 11
A
713 715anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 175first strand
Strand 2
A
178 181anti-parallel
Strand 3
A
194 206anti-parallel
Strand 4
A
211 223anti-parallel
Strand 5
A
42 46anti-parallel
Strand 6
A
398 399anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 92first strand
Strand 2
A
97 100anti-parallel
Strand 3
A
51 59anti-parallel
Strand 4
A
128 130anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 92first strand
Strand 2
A
97 100anti-parallel
Strand 3
A
51 59anti-parallel
Strand 4
A
134 137anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
425 426first strand
Strand 2
A
416 417anti-parallel
Strand 3
A
575 576anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
490 492first strand
Strand 2
A
450 453parallel
Strand 3
A
516 520parallel
Strand 4
A
542 546parallel
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