Analysis of interatomic Contacts of Structural Units in PDB entry:
9Q6O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9Q6O entry

There is 1 chain in PDB entry 9Q6O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 20LEU 910
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 9Q6O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 30Right-handed alpha
Helix 2
AA2
A
34 42Right-handed alpha
Helix 3
AA3
A
50 61Right-handed alpha
Helix 4
AA4
A
73 83Right-handed alpha
Helix 5
AA5
A
84 102Right-handed alpha
Helix 6
AA6
A
112 133Right-handed alpha
Helix 7
AA7
A
138 144Right-handed alpha
Helix 8
AA8
A
166 168Right-handed 310
Helix 9
AA9
A
247 250Right-handed 310
Helix 10
AB1
A
251 262Right-handed alpha
Helix 11
AB2
A
267 300Right-handed alpha
Helix 12
AB3
A
301 317Right-handed alpha
Helix 13
AB4
A
320 338Right-handed alpha
Helix 14
AB5
A
347 355Right-handed alpha
Helix 15
AB6
A
385 397Right-handed alpha
Helix 16
AB7
A
405 416Right-handed alpha
Helix 17
AB8
A
420 424Right-handed 310
Helix 18
AB9
A
468 473Right-handed alpha
Helix 19
AC1
A
488 504Right-handed alpha
Helix 20
AC2
A
525 529Right-handed 310
Helix 21
AC3
A
547 558Right-handed alpha
Helix 22
AC4
A
569 581Right-handed alpha
Helix 23
AC5
A
590 596Right-handed alpha
Helix 24
AC6
A
599 608Right-handed alpha
Helix 25
AC7
A
615 629Right-handed alpha
Helix 26
AC8
A
639 648Right-handed alpha
Helix 27
AC9
A
659 665Right-handed alpha
Helix 28
AD1
A
676 714Right-handed alpha
Helix 29
AD2
A
723 738Right-handed alpha
Helix 30
AD3
A
739 744Right-handed 310
Helix 31
AD4
A
747 752Right-handed 310
Helix 32
AD5
A
758 787Right-handed alpha
Helix 33
AD6
A
789 794Right-handed alpha
Helix 34
AD7
A
795 799Right-handed 310
Helix 35
AD8
A
803 828Right-handed alpha
Helix 36
AD9
A
828 833Right-handed alpha
Helix 37
AE1
A
845 862Right-handed alpha
Helix 38
AE2
A
865 871Right-handed alpha
Helix 39
AE3
A
879 907Right-handed alpha
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There are 5 sheets in PDB entry 9Q6O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 164first strand
Strand 2
A
150 155anti-parallel
Strand 3
A
173 176anti-parallel
Strand 4
A
234 246anti-parallel
Strand 5
A
185 197anti-parallel
Strand 6
A
208 209anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 164first strand
Strand 2
A
150 155anti-parallel
Strand 3
A
173 176anti-parallel
Strand 4
A
234 246anti-parallel
Strand 5
A
185 197anti-parallel
Strand 6
A
228 229anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 343first strand
Strand 2
A
668 670anti-parallel
Strand 3
A
651 654parallel
Strand 4
A
633 637parallel
Strand 5
A
357 360parallel
Strand 6
A
561 565parallel
Strand 7
A
610 612parallel
Strand 8
A
587 589parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 378first strand
Strand 2
A
532 541anti-parallel
Strand 3
A
508 515anti-parallel
Strand 4
A
462 467anti-parallel
Strand 5
A
444 451anti-parallel
Strand 6
A
430 436anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 378first strand
Strand 2
A
532 541anti-parallel
Strand 3
A
475 479parallel
Strand 4
A
484 486anti-parallel
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