Analysis of interatomic Contacts of Structural Units in PDB entry:
9Q7B

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 9Q7B entry

There are 12 chains in PDB entry 9Q7B (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 24	PRO 100
B	GLY 115	SER 486
C	GLN 24	PRO 100
D	GLY 115	SER 486
E	GLN 24	PRO 100
F	GLY 115	SER 486
G	GLN 1	SER 117
I	ASP 1	ILE 109
J	GLN 1	SER 117
K	ASP 1	ILE 109
L	GLN 1	VAL 116
M	ASP 1	ILE 109

There are 57 helices in PDB entry 9Q7B. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	26	33	Right-handed alpha
Helix 2	AA2	A	62	66	Right-handed 310
Helix 3	AA3	A	69	93	Right-handed alpha
Helix 4	AA4	A	94	98	Right-handed 310
Helix 5	AA5	B	120	124	Right-handed alpha
Helix 6	AA6	B	128	141	Right-handed alpha
Helix 7	AA7	B	143	155	Right-handed alpha
Helix 8	AA8	B	178	186	Right-handed alpha
Helix 9	AA9	B	194	218	Right-handed alpha
Helix 10	AB1	B	242	250	Right-handed alpha
Helix 11	AB2	B	255	262	Right-handed alpha
Helix 12	AB3	B	352	360	Right-handed alpha
Helix 13	AB4	B	362	366	Right-handed 310
Helix 14	AB5	B	442	446	Right-handed 310
Helix 15	AB6	B	455	472	Right-handed alpha
Helix 16	AB7	B	473	478	Right-handed alpha
Helix 17	AB8	B	479	485	Right-handed alpha
Helix 18	AB9	C	26	33	Right-handed alpha
Helix 19	AC1	C	62	66	Right-handed 310
Helix 20	AC2	C	69	96	Right-handed alpha
Helix 21	AC3	D	120	124	Right-handed alpha
Helix 22	AC4	D	128	141	Right-handed alpha
Helix 23	AC5	D	143	155	Right-handed alpha
Helix 24	AC6	D	178	185	Right-handed alpha
Helix 25	AC7	D	194	218	Right-handed alpha
Helix 26	AC8	D	242	250	Right-handed alpha
Helix 27	AC9	D	255	262	Right-handed alpha
Helix 28	AD1	D	352	360	Right-handed alpha
Helix 29	AD2	D	361	366	Right-handed 310
Helix 30	AD3	D	442	446	Right-handed 310
Helix 31	AD4	D	455	472	Right-handed alpha
Helix 32	AD5	D	473	479	Right-handed alpha
Helix 33	AD6	D	479	485	Right-handed alpha
Helix 34	AD7	E	26	32	Right-handed alpha
Helix 35	AD8	E	62	66	Right-handed 310
Helix 36	AD9	E	69	96	Right-handed alpha
Helix 37	AE1	F	120	124	Right-handed alpha
Helix 38	AE2	F	128	140	Right-handed alpha
Helix 39	AE3	F	143	155	Right-handed alpha
Helix 40	AE4	F	178	186	Right-handed alpha
Helix 41	AE5	F	194	218	Right-handed alpha
Helix 42	AE6	F	242	250	Right-handed alpha
Helix 43	AE7	F	255	262	Right-handed alpha
Helix 44	AE8	F	352	360	Right-handed alpha
Helix 45	AE9	F	362	366	Right-handed 310
Helix 46	AF1	F	442	446	Right-handed 310
Helix 47	AF2	F	455	473	Right-handed alpha
Helix 48	AF3	F	473	479	Right-handed alpha
Helix 49	AF4	F	479	485	Right-handed alpha
Helix 50	AF5	G	28	32	Right-handed 310
Helix 51	AF6	G	101	103	Right-handed 310
Helix 52	AF7	J	28	32	Right-handed 310
Helix 53	AF8	J	62	65	Right-handed 310
Helix 54	AF9	J	101	103	Right-handed 310
Helix 55	AG1	L	28	32	Right-handed 310
Helix 56	AG2	L	87	91	Right-handed 310
Helix 57	AG3	L	101	103	Right-handed 310

There are 36 sheets in PDB entry 9Q7B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	334	337	first strand
Strand 2	B	340	343	anti-parallel
Strand 3	A	35	47	parallel
Strand 4	B	287	301	anti-parallel
Strand 5	B	318	322	anti-parallel
Strand 6	B	325	329	anti-parallel
Strand 7	B	348	350	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	164	first strand
Strand 2	B	172	175	anti-parallel
Strand 3	A	51	57	parallel
Strand 4	B	278	284	anti-parallel
Strand 5	B	266	273	anti-parallel
Strand 6	B	229	230	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	118	119	first strand
Strand 2	F	428	431	parallel
Strand 3	F	422	425	anti-parallel
Strand 4	F	395	397	anti-parallel
Strand 5	F	402	403	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	127	first strand
Strand 2	F	379	382	anti-parallel
Strand 3	F	385	388	anti-parallel
Strand 4	F	413	415	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	304	306	first strand
Strand 2	B	309	313	anti-parallel
Strand 3	B	368	370	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	413	415	first strand
Strand 2	B	385	388	anti-parallel
Strand 3	B	379	382	anti-parallel
Strand 4	D	126	127	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	402	403	first strand
Strand 2	B	395	397	anti-parallel
Strand 3	B	422	425	anti-parallel
Strand 4	B	428	431	anti-parallel
Strand 5	D	118	119	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	41	first strand
Strand 2	D	294	301	anti-parallel
Strand 3	D	318	322	anti-parallel
Strand 4	D	325	329	anti-parallel
Strand 5	D	348	350	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	287	290	first strand
Strand 2	C	43	47	anti-parallel
Strand 3	D	341	343	parallel
Strand 4	D	334	336	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	161	164	first strand
Strand 2	D	172	176	anti-parallel
Strand 3	C	51	57	parallel
Strand 4	D	278	284	anti-parallel
Strand 5	D	266	273	anti-parallel
Strand 6	D	229	230	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	304	306	first strand
Strand 2	D	309	313	anti-parallel
Strand 3	D	368	370	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	413	415	first strand
Strand 2	D	385	388	anti-parallel
Strand 3	D	379	382	anti-parallel
Strand 4	F	126	127	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	402	403	first strand
Strand 2	D	395	397	anti-parallel
Strand 3	D	422	425	anti-parallel
Strand 4	D	428	431	anti-parallel
Strand 5	F	118	119	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	334	337	first strand
Strand 2	F	340	343	anti-parallel
Strand 3	E	35	47	parallel
Strand 4	F	287	301	anti-parallel
Strand 5	F	318	322	anti-parallel
Strand 6	F	325	329	anti-parallel
Strand 7	F	348	350	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	161	165	first strand
Strand 2	F	171	176	anti-parallel
Strand 3	E	52	57	parallel
Strand 4	F	278	284	anti-parallel
Strand 5	F	266	273	anti-parallel
Strand 6	F	229	230	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	304	306	first strand
Strand 2	F	309	313	anti-parallel
Strand 3	F	368	370	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	6	first strand
Strand 2	G	18	25	anti-parallel
Strand 3	G	78	83	anti-parallel
Strand 4	G	68	73	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	12	first strand
Strand 2	G	112	116	parallel
Strand 3	G	93	99	anti-parallel
Strand 4	G	34	39	anti-parallel
Strand 5	G	45	51	anti-parallel
Strand 6	G	58	60	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	10	12	first strand
Strand 2	G	112	116	parallel
Strand 3	G	93	99	anti-parallel
Strand 4	G	105	108	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	4	7	first strand
Strand 2	I	19	25	anti-parallel
Strand 3	I	74	79	anti-parallel
Strand 4	I	66	71	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	30	31	first strand
Strand 2	I	34	35	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	57	58	first strand
Strand 2	I	49	53	anti-parallel
Strand 3	I	37	42	anti-parallel
Strand 4	I	89	94	anti-parallel
Strand 5	I	100	101	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	12	first strand
Strand 2	J	112	116	parallel
Strand 3	J	93	99	anti-parallel
Strand 4	J	34	40	anti-parallel
Strand 5	J	44	51	anti-parallel
Strand 6	J	58	60	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	10	12	first strand
Strand 2	J	112	116	parallel
Strand 3	J	93	99	anti-parallel
Strand 4	J	105	108	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	18	23	first strand
Strand 2	J	78	83	anti-parallel
Strand 3	J	68	73	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	4	5	first strand
Strand 2	K	19	25	anti-parallel
Strand 3	K	74	79	anti-parallel
Strand 4	K	66	71	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	12	first strand
Strand 2	K	105	108	parallel
Strand 3	K	89	94	anti-parallel
Strand 4	K	37	42	anti-parallel
Strand 5	K	49	53	anti-parallel
Strand 6	K	57	58	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	12	first strand
Strand 2	K	105	108	parallel
Strand 3	K	89	94	anti-parallel
Strand 4	K	100	101	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	30	31	first strand
Strand 2	K	34	35	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	3	6	first strand
Strand 2	L	19	25	anti-parallel
Strand 3	L	78	82	anti-parallel
Strand 4	L	69	73	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	11	first strand
Strand 2	L	112	115	parallel
Strand 3	L	92	99	anti-parallel
Strand 4	L	34	39	anti-parallel
Strand 5	L	45	52	anti-parallel
Strand 6	L	57	60	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	11	first strand
Strand 2	L	112	115	parallel
Strand 3	L	92	99	anti-parallel
Strand 4	L	105	108	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	4	5	first strand
Strand 2	M	19	25	anti-parallel
Strand 3	M	74	79	anti-parallel
Strand 4	M	68	71	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	10	12	first strand
Strand 2	M	105	108	parallel
Strand 3	M	89	94	anti-parallel
Strand 4	M	37	42	anti-parallel
Strand 5	M	49	53	anti-parallel
Strand 6	M	57	58	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	10	12	first strand
Strand 2	M	105	108	parallel
Strand 3	M	89	94	anti-parallel
Strand 4	M	100	101	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	30	31	first strand
Strand 2	M	34	35	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 9Q7B

Analysis of interatomic Contacts of Structural Units in PDB entry:
9Q7B