Analysis of interatomic Contacts of Structural Units in PDB entry:
9Q7Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9Q7Z entry

There are 6 chains in PDB entry 9Q7Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5ARG 301
B
 G 1 G 26
C
 C 1 C 26
D
 SER 5ARG 301
E
 G 1 G 26
F
 C 1 C 26
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 9Q7Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 22Right-handed alpha
Helix 2
AA2
A
50 52Right-handed 310
Helix 3
AA3
A
53 65Right-handed alpha
Helix 4
AA4
A
83 97Right-handed alpha
Helix 5
AA5
A
103 119Right-handed alpha
Helix 6
AA6
A
120 123Right-handed 310
Helix 7
AA7
A
124 138Right-handed alpha
Helix 8
AA8
A
143 150Right-handed alpha
Helix 9
AA9
A
167 178Right-handed alpha
Helix 10
AB1
A
205 207Right-handed 310
Helix 11
AB2
A
208 220Right-handed alpha
Helix 12
AB3
A
241 249Right-handed alpha
Helix 13
AB4
A
249 256Right-handed alpha
Helix 14
AB5
A
260 278Right-handed alpha
Helix 15
AB6
A
279 282Right-handed 310
Helix 16
AB7
A
283 296Right-handed alpha
Helix 17
AB8
A
297 301Right-handed 310
Helix 18
AB9
D
11 22Right-handed alpha
Helix 19
AC1
D
50 52Right-handed 310
Helix 20
AC2
D
53 65Right-handed alpha
Helix 21
AC3
D
83 97Right-handed alpha
Helix 22
AC4
D
103 111Right-handed alpha
Helix 23
AC5
D
112 119Right-handed alpha
Helix 24
AC6
D
120 123Right-handed 310
Helix 25
AC7
D
124 138Right-handed alpha
Helix 26
AC8
D
143 150Right-handed alpha
Helix 27
AC9
D
167 178Right-handed alpha
Helix 28
AD1
D
208 219Right-handed alpha
Helix 29
AD2
D
241 249Right-handed alpha
Helix 30
AD3
D
249 256Right-handed alpha
Helix 31
AD4
D
260 278Right-handed alpha
Helix 32
AD5
D
279 282Right-handed 310
Helix 33
AD6
D
283 296Right-handed alpha
Helix 34
AD7
D
297 301Right-handed 310
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There are 4 sheets in PDB entry 9Q7Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 31first strand
Strand 2
A
39 49anti-parallel
Strand 3
A
77 81anti-parallel
Strand 4
A
68 71anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 185first strand
Strand 2
A
196 203anti-parallel
Strand 3
A
236 238anti-parallel
Strand 4
A
223 225anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
23 31first strand
Strand 2
D
39 49anti-parallel
Strand 3
D
77 81anti-parallel
Strand 4
D
68 71anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
179 186first strand
Strand 2
D
195 204anti-parallel
Strand 3
D
235 238anti-parallel
Strand 4
D
223 224anti-parallel
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