Analysis of interatomic Contacts of Structural Units in PDB entry:
9Q8F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9Q8F entry

There is 1 chain in PDB entry 9Q8F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 509
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 9Q8F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 41Right-handed alpha
Helix 2
AA2
A
45 66Right-handed alpha
Helix 3
AA3
A
83 95Right-handed alpha
Helix 4
AA4
A
107 116Right-handed alpha
Helix 5
AA5
A
134 143Right-handed alpha
Helix 6
AA6
A
149 162Right-handed alpha
Helix 7
AA7
A
172 174Right-handed 310
Helix 8
AA8
A
200 214Right-handed alpha
Helix 9
AA9
A
229 244Right-handed alpha
Helix 10
AB1
A
245 248Right-handed 310
Helix 11
AB2
A
267 272Right-handed alpha
Helix 12
AB3
A
277 291Right-handed alpha
Helix 13
AB4
A
295 308Right-handed alpha
Helix 14
AB5
A
308 321Right-handed alpha
Helix 15
AB6
A
322 327Right-handed 310
Helix 16
AB7
A
338 343Right-handed alpha
Helix 17
AB8
A
347 361Right-handed alpha
Helix 18
AB9
A
364 371Right-handed alpha
Helix 19
AC1
A
371 380Right-handed alpha
Helix 20
AC2
A
382 394Right-handed alpha
Helix 21
AC3
A
398 407Right-handed alpha
Helix 22
AC4
A
426 434Right-handed alpha
Helix 23
AC5
A
436 440Right-handed 310
Helix 24
AC6
A
453 466Right-handed alpha
Helix 25
AC7
A
466 472Right-handed alpha
Helix 26
AC8
A
476 486Right-handed alpha
Helix 27
AC9
A
487 505Right-handed alpha
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There are 2 sheets in PDB entry 9Q8F. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 73first strand
Strand 2
A
29 33parallel
Strand 3
A
4 7parallel
Strand 4
A
99 103parallel
Strand 5
A
123 126parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 166first strand
Strand 2
A
169 170anti-parallel
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