Analysis of interatomic Contacts of Structural Units in PDB entry:
9QCJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QCJ entry

There are 3 chains in PDB entry 9QCJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 21SER 247
B
 ALA 21LYS 246
C
 ALA 21LYS 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 9QCJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 42Right-handed 310
Helix 2
AA2
A
44 49Right-handed alpha
Helix 3
AA3
A
57 72Right-handed alpha
Helix 4
AA4
A
76 87Right-handed alpha
Helix 5
AA5
A
88 91Right-handed 310
Helix 6
AA6
A
92 97Right-handed alpha
Helix 7
AA7
A
97 102Right-handed alpha
Helix 8
AA8
A
110 120Right-handed alpha
Helix 9
AA9
A
120 126Right-handed alpha
Helix 10
AB1
A
129 137Right-handed alpha
Helix 11
AB2
A
140 145Right-handed alpha
Helix 12
AB3
A
166 183Right-handed alpha
Helix 13
AB4
A
186 204Right-handed alpha
Helix 14
AB5
A
208 227Right-handed alpha
Helix 15
AB6
A
229 247Right-handed alpha
Helix 16
AB7
B
38 42Right-handed 310
Helix 17
AB8
B
44 49Right-handed alpha
Helix 18
AB9
B
57 74Right-handed alpha
Helix 19
AC1
B
76 87Right-handed alpha
Helix 20
AC2
B
89 91Right-handed 310
Helix 21
AC3
B
92 97Right-handed alpha
Helix 22
AC4
B
97 102Right-handed alpha
Helix 23
AC5
B
110 120Right-handed alpha
Helix 24
AC6
B
120 126Right-handed alpha
Helix 25
AC7
B
129 137Right-handed alpha
Helix 26
AC8
B
140 146Right-handed alpha
Helix 27
AC9
B
166 183Right-handed alpha
Helix 28
AD1
B
186 204Right-handed alpha
Helix 29
AD2
B
208 227Right-handed alpha
Helix 30
AD3
B
229 246Right-handed alpha
Helix 31
AD4
C
38 42Right-handed 310
Helix 32
AD5
C
44 49Right-handed alpha
Helix 33
AD6
C
57 74Right-handed alpha
Helix 34
AD7
C
76 88Right-handed alpha
Helix 35
AD8
C
92 97Right-handed alpha
Helix 36
AD9
C
97 102Right-handed alpha
Helix 37
AE1
C
110 120Right-handed alpha
Helix 38
AE2
C
120 126Right-handed alpha
Helix 39
AE3
C
129 137Right-handed alpha
Helix 40
AE4
C
140 145Right-handed alpha
Helix 41
AE5
C
166 183Right-handed alpha
Helix 42
AE6
C
186 204Right-handed alpha
Helix 43
AE7
C
208 227Right-handed alpha
Helix 44
AE8
C
229 246Right-handed alpha
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There are no sheets in PDB entry 9QCJ
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