Analysis of interatomic Contacts of Structural Units in PDB entry:
9QCR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QCR entry

There are 13 chains in PDB entry 9QCR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
K
 GLY 34TYR 534
L
 ASN 6LYS 543
O
 CYS 10MET 4128
C
 ARG 17LEU 108
D
 ARG 30LYS 122
A
 HIS 39ARG 134
B
 ILE 26PHE 100
G
 ALA 14ASN 110
H
 LYS 31LYS 122
E
 VAL 46GLU 133
F
 ARG 23GLY 99
I
 A 8 A 136
J
 T 18 C 148
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are272 helices in PDB entry 9QCR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
K
45 50Right-handed alpha
Helix 2
AA2
K
58 78Right-handed alpha
Helix 3
AA3
K
112 121Right-handed alpha
Helix 4
AA4
K
123 136Right-handed alpha
Helix 5
AA5
K
142 157Right-handed alpha
Helix 6
AA6
K
179 197Right-handed alpha
Helix 7
AA7
K
216 220Right-handed 310
Helix 8
AA8
K
239 244Right-handed alpha
Helix 9
AA9
K
330 338Right-handed alpha
Helix 10
AB1
K
354 356Right-handed 310
Helix 11
AB2
K
357 361Right-handed 310
Helix 12
AB3
K
377 393Right-handed alpha
Helix 13
AB4
K
455 470Right-handed alpha
Helix 14
AB5
K
480 496Right-handed alpha
Helix 15
AB6
K
510 519Right-handed alpha
Helix 16
AB7
K
520 529Right-handed alpha
Helix 17
AB8
L
17 22Right-handed alpha
Helix 18
AB9
L
29 49Right-handed alpha
Helix 19
AC1
L
87 98Right-handed alpha
Helix 20
AC2
L
106 121Right-handed alpha
Helix 21
AC3
L
143 145Right-handed 310
Helix 22
AC4
L
146 157Right-handed alpha
Helix 23
AC5
L
198 216Right-handed alpha
Helix 24
AC6
L
217 223Right-handed alpha
Helix 25
AC7
L
227 233Right-handed alpha
Helix 26
AC8
L
301 306Right-handed 310
Helix 27
AC9
L
324 332Right-handed alpha
Helix 28
AD1
L
352 356Right-handed 310
Helix 29
AD2
L
370 387Right-handed alpha
Helix 30
AD3
L
447 462Right-handed alpha
Helix 31
AD4
L
478 482Right-handed 310
Helix 32
AD5
L
484 500Right-handed alpha
Helix 33
AD6
L
509 517Right-handed alpha
Helix 34
AD7
L
519 537Right-handed alpha
Helix 35
AD8
O
11 23Right-handed alpha
Helix 36
AD9
O
27 47Right-handed alpha
Helix 37
AE1
O
49 52Right-handed 310
Helix 38
AE2
O
53 72Right-handed alpha
Helix 39
AE3
O
76 96Right-handed alpha
Helix 40
AE4
O
100 117Right-handed alpha
Helix 41
AE5
O
117 123Right-handed alpha
Helix 42
AE6
O
124 141Right-handed alpha
Helix 43
AE7
O
149 160Right-handed alpha
Helix 44
AE8
O
170 172Right-handed 310
Helix 45
AE9
O
173 179Right-handed alpha
Helix 46
AF1
O
186 209Right-handed alpha
Helix 47
AF2
O
210 213Right-handed 310
Helix 48
AF3
O
217 233Right-handed alpha
Helix 49
AF4
O
240 255Right-handed alpha
Helix 50
AF5
O
262 264Right-handed 310
Helix 51
AF6
O
265 278Right-handed alpha
Helix 52
AF7
O
279 283Right-handed 310
Helix 53
AF8
O
289 302Right-handed alpha
Helix 54
AF9
O
305 330Right-handed alpha
Helix 55
AG1
O
333 341Right-handed alpha
Helix 56
AG2
O
357 368Right-handed alpha
Helix 57
AG3
O
371 376Right-handed alpha
Helix 58
AG4
O
377 397Right-handed alpha
Helix 59
AG5
O
409 423Right-handed alpha
Helix 60
AG6
O
428 430Right-handed 310
Helix 61
AG7
O
431 446Right-handed alpha
Helix 62
AG8
O
450 469Right-handed alpha
Helix 63
AG9
O
471 492Right-handed alpha
Helix 64
AH1
O
526 534Right-handed alpha
Helix 65
AH2
O
537 545Right-handed alpha
Helix 66
AH3
O
560 579Right-handed alpha
Helix 67
AH4
O
616 634Right-handed alpha
Helix 68
AH5
O
638 641Right-handed 310
Helix 69
AH6
O
642 660Right-handed alpha
Helix 70
AH7
O
665 681Right-handed alpha
Helix 71
AH8
O
698 718Right-handed alpha
Helix 72
AH9
O
725 736Right-handed alpha
Helix 73
AI1
O
737 742Right-handed alpha
Helix 74
AI2
O
744 760Right-handed alpha
Helix 75
AI3
O
762 780Right-handed alpha
Helix 76
AI4
O
781 786Right-handed alpha
Helix 77
AI5
O
788 793Right-handed alpha
Helix 78
AI6
O
834 839Right-handed alpha
Helix 79
AI7
O
848 863Right-handed alpha
Helix 80
AI8
O
863 868Right-handed alpha
Helix 81
AI9
O
869 871Right-handed 310
Helix 82
AJ1
O
906 909Right-handed 310
Helix 83
AJ2
O
910 920Right-handed alpha
Helix 84
AJ3
O
923 947Right-handed alpha
Helix 85
AJ4
O
958 974Right-handed alpha
Helix 86
AJ5
O
977 997Right-handed alpha
Helix 87
AJ6
O
1004 1015Right-handed alpha
Helix 88
AJ7
O
1022 1044Right-handed alpha
Helix 89
AJ8
O
1055 1069Right-handed alpha
Helix 90
AJ9
O
1071 1090Right-handed alpha
Helix 91
AK1
O
1092 1099Right-handed alpha
Helix 92
AK2
O
1100 1115Right-handed alpha
Helix 93
AK3
O
1124 1141Right-handed alpha
Helix 94
AK4
O
1141 1147Right-handed alpha
Helix 95
AK5
O
1164 1176Right-handed alpha
Helix 96
AK6
O
1180 1195Right-handed alpha
Helix 97
AK7
O
1196 1198Right-handed 310
Helix 98
AK8
O
1205 1213Right-handed alpha
Helix 99
AK9
O
1217 1224Right-handed alpha
Helix 100
AL1
O
1225 1230Right-handed alpha
Helix 101
AL2
O
1232 1237Right-handed alpha
Helix 102
AL3
O
1250 1273Right-handed alpha
Helix 103
AL4
O
1277 1282Right-handed alpha
Helix 104
AL5
O
1288 1299Right-handed alpha
Helix 105
AL6
O
1326 1352Right-handed alpha
Helix 106
AL7
O
1353 1355Right-handed 310
Helix 107
AL8
O
1356 1362Right-handed alpha
Helix 108
AL9
O
1368 1378Right-handed alpha
Helix 109
AM1
O
1389 1409Right-handed alpha
Helix 110
AM2
O
1411 1423Right-handed alpha
Helix 111
AM3
O
1427 1432Right-handed alpha
Helix 112
AM4
O
1442 1461Right-handed alpha
Helix 113
AM5
O
1463 1468Right-handed alpha
Helix 114
AM6
O
1477 1490Right-handed alpha
Helix 115
AM7
O
1504 1521Right-handed alpha
Helix 116
AM8
O
1526 1533Right-handed alpha
Helix 117
AM9
O
1554 1563Right-handed alpha
Helix 118
AN1
O
1563 1574Right-handed alpha
Helix 119
AN2
O
1576 1585Right-handed alpha
Helix 120
AN3
O
1590 1606Right-handed alpha
Helix 121
AN4
O
1612 1626Right-handed alpha
Helix 122
AN5
O
1627 1629Right-handed 310
Helix 123
AN6
O
1638 1656Right-handed alpha
Helix 124
AN7
O
1667 1681Right-handed alpha
Helix 125
AN8
O
1685 1694Right-handed alpha
Helix 126
AN9
O
1708 1720Right-handed alpha
Helix 127
AO1
O
1733 1754Right-handed alpha
Helix 128
AO2
O
1755 1766Right-handed alpha
Helix 129
AO3
O
1775 1788Right-handed alpha
Helix 130
AO4
O
1790 1806Right-handed alpha
Helix 131
AO5
O
1816 1822Right-handed alpha
Helix 132
AO6
O
1822 1830Right-handed alpha
Helix 133
AO7
O
1834 1843Right-handed alpha
Helix 134
AO8
O
1843 1852Right-handed alpha
Helix 135
AO9
O
1863 1881Right-handed alpha
Helix 136
AP1
O
1911 1915Right-handed 310
Helix 137
AP2
O
1916 1925Right-handed alpha
Helix 138
AP3
O
1933 1955Right-handed alpha
Helix 139
AP4
O
2034 2048Right-handed alpha
Helix 140
AP5
O
2095 2108Right-handed alpha
Helix 141
AP6
O
2125 2134Right-handed alpha
Helix 142
AP7
O
2139 2153Right-handed alpha
Helix 143
AP8
O
2154 2158Right-handed 310
Helix 144
AP9
O
2160 2172Right-handed alpha
Helix 145
AQ1
O
2185 2196Right-handed alpha
Helix 146
AQ2
O
2205 2222Right-handed alpha
Helix 147
AQ3
O
2230 2246Right-handed alpha
Helix 148
AQ4
O
2256 2261Right-handed alpha
Helix 149
AQ5
O
2270 2283Right-handed alpha
Helix 150
AQ6
O
2297 2309Right-handed alpha
Helix 151
AQ7
O
2312 2329Right-handed alpha
Helix 152
AQ8
O
2338 2351Right-handed alpha
Helix 153
AQ9
O
2357 2371Right-handed alpha
Helix 154
AR1
O
2372 2377Right-handed 310
Helix 155
AR2
O
2378 2386Right-handed alpha
Helix 156
AR3
O
2387 2389Right-handed 310
Helix 157
AR4
O
2391 2403Right-handed alpha
Helix 158
AR5
O
2410 2418Right-handed alpha
Helix 159
AR6
O
2419 2425Right-handed alpha
Helix 160
AR7
O
2428 2443Right-handed alpha
Helix 161
AR8
O
2444 2446Right-handed 310
Helix 162
AR9
O
2447 2459Right-handed alpha
Helix 163
AS1
O
2460 2462Right-handed 310
Helix 164
AS2
O
2466 2484Right-handed alpha
Helix 165
AS3
O
2492 2510Right-handed alpha
Helix 166
AS4
O
2514 2527Right-handed alpha
Helix 167
AS5
O
2534 2543Right-handed alpha
Helix 168
AS6
O
2547 2551Right-handed 310
Helix 169
AS7
O
2553 2565Right-handed alpha
Helix 170
AS8
O
2723 2729Right-handed alpha
Helix 171
AS9
O
2786 2799Right-handed alpha
Helix 172
AT1
O
2801 2821Right-handed alpha
Helix 173
AT2
O
2822 2824Right-handed 310
Helix 174
AT3
O
2825 2847Right-handed alpha
Helix 175
AT4
O
2851 2864Right-handed alpha
Helix 176
AT5
O
2865 2869Right-handed 310
Helix 177
AT6
O
2872 2884Right-handed alpha
Helix 178
AT7
O
2885 2899Right-handed alpha
Helix 179
AT8
O
2919 2934Right-handed alpha
Helix 180
AT9
O
2935 2946Right-handed alpha
Helix 181
AU1
O
2950 2962Right-handed alpha
Helix 182
AU2
O
2965 2978Right-handed alpha
Helix 183
AU3
O
2987 3005Right-handed alpha
Helix 184
AU4
O
3007 3016Right-handed alpha
Helix 185
AU5
O
3017 3019Right-handed 310
Helix 186
AU6
O
3034 3056Right-handed alpha
Helix 187
AU7
O
3059 3071Right-handed alpha
Helix 188
AU8
O
3071 3093Right-handed alpha
Helix 189
AU9
O
3095 3117Right-handed alpha
Helix 190
AV1
O
3121 3145Right-handed alpha
Helix 191
AV2
O
3157 3162Right-handed alpha
Helix 192
AV3
O
3175 3197Right-handed alpha
Helix 193
AV4
O
3227 3249Right-handed alpha
Helix 194
AV5
O
3255 3266Right-handed alpha
Helix 195
AV6
O
3269 3288Right-handed alpha
Helix 196
AV7
O
3294 3299Right-handed alpha
Helix 197
AV8
O
3299 3304Right-handed alpha
Helix 198
AV9
O
3305 3308Right-handed 310
Helix 199
AW1
O
3319 3343Right-handed alpha
Helix 200
AW2
O
3354 3364Right-handed alpha
Helix 201
AW3
O
3369 3394Right-handed alpha
Helix 202
AW4
O
3408 3428Right-handed alpha
Helix 203
AW5
O
3445 3456Right-handed alpha
Helix 204
AW6
O
3458 3475Right-handed alpha
Helix 205
AW7
O
3475 3487Right-handed alpha
Helix 206
AW8
O
3499 3507Right-handed alpha
Helix 207
AW9
O
3513 3524Right-handed alpha
Helix 208
AX1
O
3530 3536Right-handed alpha
Helix 209
AX2
O
3547 3560Right-handed alpha
Helix 210
AX3
O
3564 3576Right-handed alpha
Helix 211
AX4
O
3581 3593Right-handed alpha
Helix 212
AX5
O
3605 3615Right-handed alpha
Helix 213
AX6
O
3627 3632Right-handed alpha
Helix 214
AX7
O
3634 3641Right-handed alpha
Helix 215
AX8
O
3661 3669Right-handed alpha
Helix 216
AX9
O
3684 3689Right-handed alpha
Helix 217
AY1
O
3758 3778Right-handed alpha
Helix 218
AY2
O
3778 3785Right-handed alpha
Helix 219
AY3
O
3812 3820Right-handed alpha
Helix 220
AY4
O
3821 3829Right-handed alpha
Helix 221
AY5
O
3833 3839Right-handed alpha
Helix 222
AY6
O
3856 3861Right-handed alpha
Helix 223
AY7
O
3863 3878Right-handed alpha
Helix 224
AY8
O
3881 3891Right-handed alpha
Helix 225
AY9
O
3893 3898Right-handed alpha
Helix 226
AZ1
O
3900 3918Right-handed alpha
Helix 227
AZ2
O
3924 3927Right-handed 310
Helix 228
AZ3
O
3948 3953Right-handed alpha
Helix 229
AZ4
O
3964 3969Right-handed alpha
Helix 230
AZ5
O
3970 3972Right-handed 310
Helix 231
AZ6
O
3980 3991Right-handed alpha
Helix 232
AZ7
O
3995 4001Right-handed alpha
Helix 233
AZ8
O
4008 4013Right-handed alpha
Helix 234
AZ9
O
4039 4053Right-handed alpha
Helix 235
BA1
O
4055 4068Right-handed alpha
Helix 236
BA2
O
4073 4083Right-handed alpha
Helix 237
BA3
O
4085 4093Right-handed alpha
Helix 238
BA4
O
4099 4112Right-handed alpha
Helix 239
BA5
O
4112 4119Right-handed alpha
Helix 240
BA6
C
18 22Right-handed 310
Helix 241
BA7
C
26 37Right-handed alpha
Helix 242
BA8
C
45 72Right-handed alpha
Helix 243
BA9
C
79 90Right-handed alpha
Helix 244
BB1
C
90 97Right-handed alpha
Helix 245
BB2
D
34 46Right-handed alpha
Helix 246
BB3
D
52 82Right-handed alpha
Helix 247
BB4
D
87 99Right-handed alpha
Helix 248
BB5
D
104 122Right-handed alpha
Helix 249
BB6
A
46 57Right-handed alpha
Helix 250
BB7
A
63 79Right-handed alpha
Helix 251
BB8
A
85 114Right-handed alpha
Helix 252
BB9
A
120 131Right-handed alpha
Helix 253
BC1
B
30 41Right-handed alpha
Helix 254
BC2
B
49 76Right-handed alpha
Helix 255
BC3
B
82 93Right-handed alpha
Helix 256
BC4
G
16 21Right-handed alpha
Helix 257
BC5
G
26 37Right-handed alpha
Helix 258
BC6
G
45 74Right-handed alpha
Helix 259
BC7
G
79 90Right-handed alpha
Helix 260
BC8
G
90 98Right-handed alpha
Helix 261
BC9
H
36 46Right-handed alpha
Helix 262
BD1
H
52 81Right-handed alpha
Helix 263
BD2
H
87 99Right-handed alpha
Helix 264
BD3
H
101 120Right-handed alpha
Helix 265
BD4
E
48 57Right-handed alpha
Helix 266
BD5
E
63 76Right-handed alpha
Helix 267
BD6
E
87 114Right-handed alpha
Helix 268
BD7
E
120 131Right-handed alpha
Helix 269
BD8
F
24 29Right-handed alpha
Helix 270
BD9
F
30 41Right-handed alpha
Helix 271
BE1
F
48 77Right-handed alpha
Helix 272
BE2
F
82 93Right-handed alpha
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There are 20 sheets in PDB entry 9QCR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
102 109first strand
Strand 2
K
81 88anti-parallel
Strand 3
K
36 43parallel
Strand 4
K
163 170parallel
Strand 5
K
199 204parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
258 262first strand
Strand 2
K
268 274anti-parallel
Strand 3
K
367 370anti-parallel
Strand 4
K
431 437anti-parallel
Strand 5
K
409 416anti-parallel
Strand 6
K
394 401anti-parallel
Strand 7
K
344 352anti-parallel
Strand 8
K
258 262parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
288 289first strand
Strand 2
L
310 311anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
299 302first strand
Strand 2
L
291 294anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
325 329first strand
Strand 2
K
316 322anti-parallel
Strand 3
L
277 280anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
375 376first strand
Strand 2
L
540 541anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
77 84first strand
Strand 2
L
53 59anti-parallel
Strand 3
L
9 15parallel
Strand 4
L
130 135parallel
Strand 5
L
159 165parallel
Strand 6
L
224 226parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
264 268first strand
Strand 2
L
357 364anti-parallel
Strand 3
L
417 423anti-parallel
Strand 4
L
404 412anti-parallel
Strand 5
L
389 395anti-parallel
Strand 6
L
342 347anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
464 465first strand
Strand 2
L
474 475anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
583 584first strand
Strand 2
O
613 614anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
894 895first strand
Strand 2
O
904 905anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
2586 2588first strand
Strand 2
O
2776 2778anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
3735 3736first strand
Strand 2
O
3750 3753anti-parallel
Strand 3
O
3802 3804anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
3810 3811first strand
Strand 2
O
3929 3930anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
42 43first strand
Strand 2
D
85 86parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 78first strand
Strand 2
D
50 51parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
B
80 81parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
101 102first strand
Strand 2
F
97 98parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
83 84first strand
Strand 2
F
80 81parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
118 119first strand
Strand 2
F
45 46parallel
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