Analysis of interatomic Contacts of Structural Units in PDB entry:
9QDT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QDT entry

There is 1 chain in PDB entry 9QDT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 46GLN 462
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 9QDT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 57Right-handed alpha
Helix 2
AA2
A
58 64Right-handed alpha
Helix 3
AA3
A
70 74Right-handed 310
Helix 4
AA4
A
78 93Right-handed alpha
Helix 5
AA5
A
94 104Right-handed alpha
Helix 6
AA6
A
109 123Right-handed alpha
Helix 7
AA7
A
127 131Right-handed 310
Helix 8
AA8
A
140 159Right-handed alpha
Helix 9
AA9
A
165 169Right-handed 310
Helix 10
AB1
A
183 195Right-handed alpha
Helix 11
AB2
A
196 200Right-handed 310
Helix 12
AB3
A
206 210Right-handed 310
Helix 13
AB4
A
212 216Right-handed 310
Helix 14
AB5
A
226 230Right-handed 310
Helix 15
AB6
A
241 245Right-handed 310
Helix 16
AB7
A
256 262Right-handed alpha
Helix 17
AB8
A
263 267Right-handed 310
Helix 18
AB9
A
275 284Right-handed alpha
Helix 19
AC1
A
286 296Right-handed alpha
Helix 20
AC2
A
302 315Right-handed alpha
Helix 21
AC3
A
322 329Right-handed alpha
Helix 22
AC4
A
331 335Right-handed 310
Helix 23
AC5
A
336 349Right-handed alpha
Helix 24
AC6
A
350 355Right-handed alpha
Helix 25
AC7
A
380 385Right-handed alpha
Helix 26
AC8
A
386 391Right-handed alpha
Helix 27
AC9
A
392 396Right-handed 310
Helix 28
AD1
A
406 410Right-handed 310
Helix 29
AD2
A
421 433Right-handed alpha
Helix 30
AD3
A
439 452Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 9QDT.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 367first strand
Strand 2
A
398 400anti-parallel
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