Analysis of interatomic Contacts of Structural Units in PDB entry:
9QE7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 9QE7 entry

There is 1 chain in PDB entry 9QE7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 290GLY 1772
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 9QE7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
588 592Right-handed 310
Helix 2
AA2
A
593 597Right-handed 310
Helix 3
AA3
A
1024 1029Right-handed alpha
Helix 4
AA4
A
1055 1058Right-handed 310
Helix 5
AA5
A
1380 1384Right-handed 310
Helix 6
AA6
A
1705 1708Right-handed 310
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There are 29 sheets in PDB entry 9QE7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 396first strand
Strand 2
A
421 423parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
410 411first strand
Strand 2
A
438 441parallel
Strand 3
A
472 475parallel
Strand 4
A
511 514parallel
Strand 5
A
568 571parallel
Strand 6
A
639 642parallel
Strand 7
A
664 667parallel
Strand 8
A
742 744parallel
Strand 9
A
797 798parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 419first strand
Strand 2
A
446 447parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
434 435first strand
Strand 2
A
468 469parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
478 479first strand
Strand 2
A
482 483anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
488 491first strand
Strand 2
A
520 524parallel
Strand 3
A
577 581parallel
Strand 4
A
648 652parallel
Strand 5
A
698 702parallel
Strand 6
A
752 756parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
532 534first strand
Strand 2
A
547 550anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
563 565first strand
Strand 2
A
633 636parallel
Strand 3
A
658 659parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
694 695first strand
Strand 2
A
748 749parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
736 738first strand
Strand 2
A
789 791parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
761 762first strand
Strand 2
A
782 783anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
769 770first strand
Strand 2
A
826 828parallel
Strand 3
A
815 817anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
838 839first strand
Strand 2
A
862 863parallel
Strand 3
A
887 888parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
843 845first strand
Strand 2
A
867 869parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
923 924first strand
Strand 2
A
958 959parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
941 943first strand
Strand 2
A
965 967parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
975 976first strand
Strand 2
A
1002 1004parallel
Strand 3
A
1032 1033parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1011 1012first strand
Strand 2
A
1042 1043parallel
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There are 11 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1018 1022first strand
Strand 2
A
1049 1053parallel
Strand 3
A
1087 1091parallel
Strand 4
A
1114 1118parallel
Strand 5
A
1138 1143parallel
Strand 6
A
1168 1173parallel
Strand 7
A
1191 1196parallel
Strand 8
A
1214 1220parallel
Strand 9
A
1240 1246parallel
Strand 10
A
1273 1278parallel
Strand 11
A
1302 1306parallel
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There are 8 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1123 1126first strand
Strand 2
A
1152 1155parallel
Strand 3
A
1176 1179parallel
Strand 4
A
1201 1203parallel
Strand 5
A
1224 1226parallel
Strand 6
A
1255 1259parallel
Strand 7
A
1286 1290parallel
Strand 8
A
1319 1321parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1158 1161first strand
Strand 2
A
1182 1185parallel
Strand 3
A
1206 1209parallel
Strand 4
A
1232 1235parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1262 1265first strand
Strand 2
A
1293 1296parallel
Strand 3
A
1324 1325parallel
Strand 4
A
1351 1352parallel
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There are 14 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1333 1335first strand
Strand 2
A
1360 1364parallel
Strand 3
A
1391 1395parallel
Strand 4
A
1417 1422parallel
Strand 5
A
1440 1445parallel
Strand 6
A
1469 1473parallel
Strand 7
A
1502 1506parallel
Strand 8
A
1530 1535parallel
Strand 9
A
1561 1565parallel
Strand 10
A
1588 1592parallel
Strand 11
A
1619 1622parallel
Strand 12
A
1644 1649parallel
Strand 13
A
1671 1674parallel
Strand 14
A
1694 1697parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1341 1343first strand
Strand 2
A
1369 1371parallel
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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1400 1403first strand
Strand 2
A
1425 1428parallel
Strand 3
A
1450 1451parallel
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There are 10 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1408 1409first strand
Strand 2
A
1431 1434parallel
Strand 3
A
1458 1461parallel
Strand 4
A
1488 1491parallel
Strand 5
A
1521 1523parallel
Strand 6
A
1552 1555parallel
Strand 7
A
1579 1582parallel
Strand 8
A
1603 1605parallel
Strand 9
A
1635 1638parallel
Strand 10
A
1661 1662parallel
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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1482 1483first strand
Strand 2
A
1515 1518parallel
Strand 3
A
1546 1549parallel
Strand 4
A
1569 1572parallel
Strand 5
A
1597 1600parallel
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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1627 1629first strand
Strand 2
A
1653 1656parallel
Strand 3
A
1677 1680parallel
Strand 4
A
1701 1702parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1684 1685first strand
Strand 2
A
1710 1711parallel
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